Damien Eveillard

Orcid: 0000-0002-8162-7360

According to our database1, Damien Eveillard authored at least 16 papers between 2003 and 2020.

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Bibliography

2020
From Systems Biology to Systems Ecology: A Computational Journey Through Biological Scales. (De la biologie systémique à l'écologie systémique : un voyage informatique à travers les échelles biologiques).
, 2020

2017
Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks.
PLoS Comput. Biol., 2017

2016
Deciphering transcriptional regulations coordinating the response to environmental changes.
BMC Bioinform., 2016

2015
OPINION PAPER Evolutionary Constraint-Based Formulation Requires New Bi-level Solving Techniques.
Proceedings of the Computational Methods in Systems Biology, 2015

2013
Extending the Metabolic Network of <i>Ectocarpus Siliculosus</i> Using Answer Set Programming.
Proceedings of the Logic Programming and Nonmonotonic Reasoning, 2013

An ASP Application in Integrative Biology: Identification of Functional Gene Units.
Proceedings of the Logic Programming and Nonmonotonic Reasoning, 2013

2011
Integrating Quantitative Knowledge into a Qualitative Gene Regulatory Network.
PLoS Comput. Biol., 2011

SIPPER: A flexible method to integrate heterogeneous data into a metabolic network.
Proceedings of the IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences, 2011

2010
Hybrid modeling of biological networks: mixing temporal and qualitative biological properties.
BMC Syst. Biol., 2010

Including Ordinary Differential Equations Based Constraints in the Standard CP Framework.
Proceedings of the Principles and Practice of Constraint Programming - CP 2010, 2010

2009
Temporal constraints of a gene regulatory network: Refining a qualitative simulation.
Biosyst., 2009

Homogeneous decomposition of protein interaction networks: refining the description of intra-modular interactions.
Bioinform., 2009

Comparing Bacterial Genomes by Searching Their Common Intervals.
Proceedings of the Bioinformatics and Computational Biology, 2009

2004
A multi-scale constraint programming model of alternative splicing regulation.
Theor. Comput. Sci., 2004

Building and Analysing an Integrative Model of HIV-1 RNA Alternative Splicing.
Proceedings of the Computational Methods in Systems Biology, International Conference, 2004

2003
Multiscale Modeling of Alternative Splicing Regulation.
Proceedings of the Computational Methods in Systems Biology, First International Workshop, 2003


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