Dac-Trung Nguyen

According to our database, Dac-Trung Nguyen authored at least 17 papers between 2015 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2023

Pharos 2023: an integrated resource for the understudied human proteome.

Keith J. Kelleher, Timothy Sheils, Stephen L. Mathias, Jeremy J. Yang, Vincent T. Metzger, Vishal B. Siramshetty, Dac-Trung Nguyen, Lars Juhl Jensen, Dusica Vidovic, Stephan C. Schürer, Jayme Holmes, Karlie R. Sharma, Ajay Pillai, Cristian Bologa, Jeremy S. Edwards, Ewy A. Mathé, Tudor I. Oprea

Nucleic Acids Res., January, 2023

2022

NCATS Inxight Drugs: a comprehensive and curated portal for translational research.

Vishal B. Siramshetty, Ivan Grishagin, Ðac-Trung Nguyen, Tyler Peryea, Yulia Skovpen, Oleg Stroganov, Daniel Katzel, Timothy Sheils, Ajit Jadhav, Ewy A. Mathé, Noel Southall

Nucleic Acids Res., 2022

Rare disease-based scientific annotation knowledge graph.

Qian Zhu, Chunxu Qu, Ruizheng Liu, Gunjan Vatas, Andrew Clough, Ðac-Trung Nguyen, Eric Sid, Ewy A. Mathé, Yanji Xu

Frontiers Artif. Intell., 2022

2021

TCRD and Pharos 2021: mining the human proteome for disease biology.

Timothy Sheils, Stephen L. Mathias, Keith J. Kelleher, Vishal B. Siramshetty, Dac-Trung Nguyen, Cristian Bologa, Lars Juhl Jensen, Dusica Vidovic, Amar Koleti, Stephan C. Schürer, Anna Waller, Jeremy J. Yang, Jayme Holmes, Giovanni Bocci, Noel Southall, Poorva Dharkar, Ewy A. Mathé, Anton Simeonov, Tudor I. Oprea

Nucleic Acids Res., 2021

Global Substance Registration System: consistent scientific descriptions for substances related to health.

Tyler Peryea, Noel Southall, Mitch Miller, Daniel Katzel, Niko Anderson, Jorge Neyra, Sarah Stemann, Dac-Trung Nguyen, Dammika Amugoda, Archana Newatia, Ramez Ghazzaoui, Elaine Johanson, Herman Diederik, Larry Callahan, Frank Switzer

Nucleic Acids Res., 2021

DrugCentral 2021 supports drug discovery and repositioning.

Sorin I. Avram, Cristian Bologa, Jayme Holmes, Giovanni Bocci, Thomas B. Wilson, Dac-Trung Nguyen, Ramona Curpan, Liliana Halip, Alina Bora, Jeremy J. Yang, Jeffrey Knockel, Suman Sirimulla, Oleg Ursu, Tudor I. Oprea

Nucleic Acids Res., 2021

Scientific Evidence Based Knowledge Graph in Rare Diseases.

Qian Zhu, Ruizheng Liu, Gunjan Vatas, Andrew Clough, Yanji Xu, Dac-Trung Nguyen, Ewy A. Mathé, Eric Sid

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

Leveraging Integrative Knowledge Graphs to Improve Health Information Access for Rare Diseases.

Dac-Trung Nguyen, Eric Sid

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

2020

Critical Assessment of Artificial Intelligence Methods for Prediction of hERG Channel Inhibition in the "Big Data" Era.

Vishal B. Siramshetty, Dac-Trung Nguyen, Natalia J. Martinez, Noel Southall, Anton Simeonov, Alexey V. Zakharov

J. Chem. Inf. Model., 2020

Predicting liver cytosol stability of small molecules.

Pranav Shah, Vishal B. Siramshetty, Alexey V. Zakharov, Noel Southall, Xin Xu, Dac-Trung Nguyen

J. Cheminformatics, 2020

An integrative knowledge graph for rare diseases, derived from the Genetic and Rare Diseases Information Center (GARD).

Qian Zhu, Dac-Trung Nguyen, Ivan Grishagin, Noel Southall, Eric Sid, Anne Pariser

J. Biomed. Semant., 2020

2019

DrugCentral 2018: an update.

Oleg Ursu, Jayme Holmes, Cristian Bologa, Jeremy J. Yang, Stephen L. Mathias, Vasileios Stathias, Dac-Trung Nguyen, Stephan C. Schürer, Tudor I. Oprea

Nucleic Acids Res., 2019

Novel Consensus Architecture To Improve Performance of Large-Scale Multitask Deep Learning QSAR Models.

Alexey V. Zakharov, Tongan Zhao, Dac-Trung Nguyen, Tyler Peryea, Timothy Sheils, Adam Yasgar, Ruili Huang, Noel Southall, Anton Simeonov

J. Chem. Inf. Model., 2019

Scaffold-Based Analytics: Enabling Hit-to-Lead Decisions by Visualizing Chemical Series Linked across Large Datasets.

Deepak Bandyopadhyay, Constantine Kreatsoulas, Pat G. Brady, Joseph Boyer, Zangdong He, Genaro Scavello, Tyler Peryea, Ajit Jadhav, Dac-Trung Nguyen, Rajarshi Guha

J. Chem. Inf. Model., 2019

2017

Pharos: Collating protein information to shed light on the druggable genome.

Dac-Trung Nguyen, Stephen L. Mathias, Cristian Bologa, Søren Brunak, Nicolas F. Fernandez, Anna Gaulton, Anne Hersey, Jayme Holmes, Lars Juhl Jensen, Anneli Karlsson, Guixia Liu, Avi Ma'ayan, Geetha Mandava, Subramani Mani, Saurabh Mehta, John P. Overington, Juhee Patel, Andrew D. Rouillard, Stephan C. Schürer, Timothy Sheils, Anton Simeonov, Larry A. Sklar, Noel Southall, Oleg Ursu, Dusica Vidovic, Anna Waller, Jeremy J. Yang, Ajit Jadhav, Tudor I. Oprea, Rajarshi Guha

Nucleic Acids Res., 2017

Drug target ontology to classify and integrate drug discovery data.

Yu Lin, Saurabh Mehta, Hande Küçük-McGinty, John Paul Turner, Dusica Vidovic, Michele Forlin, Amar Koleti, Dac-Trung Nguyen, Lars Juhl Jensen, Rajarshi Guha, Stephen L. Mathias, Oleg Ursu, Vasileios Stathias, Jianbin Duan, Nooshin Nabizadeh, Caty Chung, Christopher Mader, Ubbo Visser, Jeremy J. Yang, Cristian Bologa, Tudor I. Oprea, Stephan C. Schürer

J. Biomed. Semant., 2017

2015

BioAssay Research Database (BARD): chemical biology and probe-development enabled by structured metadata and result types.

E. A. Howe, Andrea de Souza, David L. Lahr, S. Chatwin, Philip Montgomery, B. R. Alexander, Dac-Trung Nguyen, Yasel Cruz, D. A. Stonich, G. Walzer, J. T. Rose, S. C. Picard, Zihan Liu, Jamie N. Rose, X. Xiang, Jacob K. Asiedu, D. Durkin, J. Levine, J. J. Yang, Stephan C. Schürer, John C. Braisted, Noel Southall, Mark R. Southern, T. D. Y. Chung, Steve Brudz, C. Tanega, Stuart L. Schreiber, Joshua A. Bittker, Rajarshi Guha, Paul A. Clemons

Nucleic Acids Res., 2015