Cong Liu

Orcid: 0000-0001-6024-3037

Affiliations:
  • Columbia University, Department of Biomedical Informatics, New York, USA


According to our database1, Cong Liu authored at least 27 papers between 2016 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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2024
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Legend:

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Article 
PhD thesis 
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Links

Online presence:

On csauthors.net:

Bibliography

2024
Enhancing phenotype recognition in clinical notes using large language models: PhenoBCBERT and PhenoGPT.
Patterns, January, 2024

Phenotype driven molecular genetic test recommendation for diagnosing pediatric rare disorders.
npj Digit. Medicine, 2024

Converting OMOP CDM to phenopackets: A model alignment and patient data representation evaluation.
J. Biomed. Informatics, 2024

Fine-tuning large language models for rare disease concept normalization.
J. Am. Medical Informatics Assoc., 2024

2023
Characterizing variability of electronic health record-driven phenotype definitions.
J. Am. Medical Informatics Assoc., February, 2023

Multimodal Machine Learning Combining Facial Images and Clinical Texts Improves Diagnosis of Rare Genetic Diseases.
CoRR, 2023

2022
Natural language processing to identify lupus nephritis phenotype in electronic health records.
BMC Medical Informatics Decis. Mak., December, 2022

Leveraging electronic health record data for clinical trial planning by assessing eligibility criteria's impact on patient count and safety.
J. Biomed. Informatics, 2022

Deep learning for rare disease: A scoping review.
J. Biomed. Informatics, 2022

2021
The COVID-19 Trial Finder.
J. Am. Medical Informatics Assoc., 2021

Towards clinical data-driven eligibility criteria optimization for interventional COVID-19 clinical trials.
J. Am. Medical Informatics Assoc., 2021

<i>RePhine</i>: An Integrative Method for Identification of Drug Response-related Transcriptional Regulators.
Genom. Proteom. Bioinform., 2021

Natural language processing to identify lupus nephritis phenotype in electronic health records.
CoRR, 2021

Participatory Design of a Clinical Trial Eligibility Criteria Simplification Method.
Proceedings of the Public Health and Informatics, 2021

Interactive Similarity-Based Search of Clinical Trials.
Proceedings of the MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation, 2021

Evaluation of Criteria2Query: Towards Augmented Intelligence for Cohort Identification.
Proceedings of the MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation, 2021

Towards Better Diagnosis Prediction Using Bidirectional Recurrent Neural Networks.
Proceedings of the MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation, 2021

Evaluation of the Portability of Natural Language Processing-based Computable Phenotypes in the eMERGE Network.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

2020
Natural language processing (NLP) tools in extracting biomedical concepts from research articles: a case study on autism spectrum disorder.
BMC Medical Informatics Decis. Mak., 2020

2019
Doc2Hpo: a web application for efficient and accurate HPO concept curation.
Nucleic Acids Res., 2019

Making work visible for electronic phenotype implementation: Lessons learned from the eMERGE network.
J. Biomed. Informatics, 2019

Ensembles of natural language processing systems for portable phenotyping solutions.
J. Biomed. Informatics, 2019

Facilitating phenotype transfer using a common data model.
J. Biomed. Informatics, 2019

DQueST: dynamic questionnaire for search of clinical trials.
J. Am. Medical Informatics Assoc., 2019

2016
Meta-analysis of sex differences in gene expression in schizophrenia.
BMC Syst. Biol., 2016

High-dimensional omics data analysis using a variable screening protocol with prior knowledge integration (SKI).
BMC Syst. Biol., 2016

A novel scoring estimator to screening for oncogenic chimeric transcripts in cancer transcriptome sequencing.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016


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