Christopher Bystroff

Orcid: 0000-0002-2813-3716

According to our database1, Christopher Bystroff authored at least 24 papers between 2000 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Links

On csauthors.net:

Bibliography

2024
Challenges and Solutions for Leave-One-Out Biosensor Design in the Context of a Rugged Fitness Landscape.
Sensors, October, 2024

2020
Better together: Elements of successful scientific software development in a distributed collaborative community.
PLoS Comput. Biol., 2020

2018
Fast design of arbitrary length loops in proteins using InteractiveRosetta.
BMC Bioinform., 2018

2016
Protein backbone ensemble generation explores the local structural space of unseen natural homologs.
Bioinform., 2016

2015
InteractiveROSETTA: a graphical user interface for the PyRosetta protein modeling suite.
Bioinform., 2015

2014
Improving computational efficiency and tractability of protein design using a piecemeal approach. A strategy for parallel and distributed protein design.
Bioinform., 2014

2013
Expanded Explorations into the Optimization of an Energy Function for Protein Design.
IEEE ACM Trans. Comput. Biol. Bioinform., 2013

2012
Exploring objective functions and cross-terms in the optimization of an energy function for protein design.
Proceedings of the ACM International Conference on Bioinformatics, 2012

2010
FlexSnap: Flexible Non-sequential Protein Structure Alignment.
Algorithms Mol. Biol., 2010

2009
Iterative Non-Sequential protein Structural Alignment.
J. Bioinform. Comput. Biol., 2009

2008
Pairwise covariance adds little to secondary structure prediction but improves the prediction of non-canonical local structure.
BMC Bioinform., 2008

2006
Improved pairwise alignments of proteins in the Twilight Zone using local structure predictions.
Bioinform., 2006

2005
Non-sequential structure-based alignments reveal topology-independent core packing arrangements in proteins.
Bioinform., 2005

Improved pairwise alignment of proteins in the Twilight Zone using local structure predictions.
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005

Efficient Sampling of Protein Folding Pathways using HMMSTR and Efficient Sampling of Protein Folding Pathways using HMMSTR and.
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005

ECOME: A simple model for an evolving consumption web.
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005

Predicting Protein Folding Pathways.
Proceedings of the Data Mining in Bioinformatics, 2005

2004
Predicting protein folding pathways.
Proceedings of the Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, 2004

2003
Mining residue contacts in proteins using local structure predictions.
IEEE Trans. Syst. Man Cybern. Part B, 2003

Efficient remote homology detection using local structure.
Bioinform., 2003

2002
Mining Protein Contact Maps.
Proceedings of the 2nd ACM SIGKDD Workshop on Data Mining in Bioinformatics (BIOKDD 2002), 2002

Fully automated ab initio protein structure prediction using I-STES, HMMSTR and ROSETTA.
Proceedings of the Tenth International Conference on Intelligent Systems for Molecular Biology, 2002

2000
Detection of Protein Coding Sequences Using a Mixture Model for Local Protein Amino Acid Sequence.
J. Comput. Biol., 2000

Mining Residue Contacts in Proteins.
Proceedings of the 1st IEEE International Symposium on Bioinformatics and Biomedical Engineering, 2000


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