Christian Wachinger

Orcid: 0000-0002-3652-1874

Affiliations:
  • University Hospital Munich, Department of Child and Adolescent Psychiatry, Germany
  • Massachusetts Institute of Technology, CSAIL, Cambridge, MA, USA
  • Harvard Medical School, Department of Neurology, Boston, MA, USA
  • TU Munich, Department of Informatics, Germany


According to our database1, Christian Wachinger authored at least 112 papers between 2006 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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Bibliography

2024
Neural deformation fields for template-based reconstruction of cortical surfaces from MRI.
Medical Image Anal., 2024

DiaMond: Dementia Diagnosis with Multi-Modal Vision Transformers Using MRI and PET.
CoRR, 2024

Stable-Pose: Leveraging Transformers for Pose-Guided Text-to-Image Generation.
CoRR, 2024

From Barlow Twins to Triplet Training: Differentiating Dementia with Limited Data.
CoRR, 2024

Stochastic Cortical Self-Reconstruction.
CoRR, 2024

V2C-Long: Longitudinal Cortex Reconstruction with Spatiotemporal Correspondence.
CoRR, 2024

Mamba? Catch The Hype Or Rethink What Really Helps for Image Registration.
Proceedings of the Biomedical Image Registration - 11th International Workshop, 2024

PASTA: Pathology-Aware MRI to PET CroSs-modal TrAnslation with Diffusion Models.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2024, 2024

H-ViT: A Hierarchical Vision Transformer for Deformable Image Registration.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2024

Keep the Faith: Faithful Explanations in Convolutional Neural Networks for Case-Based Reasoning.
Proceedings of the Thirty-Eighth AAAI Conference on Artificial Intelligence, 2024

2023
The Liver Tumor Segmentation Benchmark (LiTS).
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Medical Image Anal., 2023

Meshes Meet Voxels: Abdominal Organ Segmentation via Diffeomorphic Deformations.
CoRR, 2023

RegBN: Batch Normalization of Multimodal Data with Regularization.
Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023

Vertex Correspondence in Cortical Surface Reconstruction.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

Don't PANIC: Prototypical Additive Neural Network for Interpretable Classification of Alzheimer's Disease.
Proceedings of the Information Processing in Medical Imaging, 2023

HALOS: Hallucination-Free Organ Segmentation After Organ Resection Surgery.
Proceedings of the Information Processing in Medical Imaging, 2023

2022
DAFT: A universal module to interweave tabular data and 3D images in CNNs.
NeuroImage, 2022

AbdomenNet: deep neural network for abdominal organ segmentation in epidemiologic imaging studies.
BMC Medical Imaging, 2022

CASHformer: Cognition Aware SHape Transformer for Longitudinal Analysis.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

Joint Reconstruction and Parcellation of Cortical Surfaces.
Proceedings of the Machine Learning in Clinical Neuroimaging - 5th International Workshop, 2022

Is a PET All You Need? A Multi-modal Study for Alzheimer's Disease Using 3D CNNs.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

Vox2Cortex: Fast Explicit Reconstruction of Cortical Surfaces from 3D MRI Scans with Geometric Deep Neural Networks.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2022

2021
Detect and correct bias in multi-site neuroimaging datasets.
Medical Image Anal., 2021

Discriminative and generative models for anatomical shape analysis on point clouds with deep neural networks.
Medical Image Anal., 2021

The Medical Segmentation Decathlon.
CoRR, 2021

Semi-Structured Deep Piecewise Exponential Models.
Proceedings of AAAI Symposium on Survival Prediction, 2021

TransforMesh: A Transformer Network for Longitudinal Modeling of Anatomical Meshes.
Proceedings of the Machine Learning in Medical Imaging - 12th International Workshop, 2021

Alzheimer's Disease Diagnosis via Deep Factorization Machine Models.
Proceedings of the Machine Learning in Medical Imaging - 12th International Workshop, 2021

Combining 3D Image and Tabular Data via the Dynamic Affine Feature Map Transform.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

Scalable, Axiomatic Explanations of Deep Alzheimer's Diagnosis from Heterogeneous Data.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

STRUDEL: Self-training with Uncertainty Dependent Label Refinement Across Domains.
Proceedings of the Machine Learning in Medical Imaging - 12th International Workshop, 2021

Geometric Deep Learning on Anatomical Meshes for the Prediction of Alzheimer's Disease.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

Estimation of Causal Effects in the Presence of Unobserved Confounding in the Alzheimer's Continuum.
Proceedings of the Information Processing in Medical Imaging, 2021

2020
Keypoint Transfer for Fast Whole-Body Segmentation.
IEEE Trans. Medical Imaging, 2020

Recalibrating 3D ConvNets With Project & Excite.
IEEE Trans. Medical Imaging, 2020

Neuroimage signature from salient keypoints is highly specific to individuals and shared by close relatives.
NeuroImage, 2020

'Squeeze & excite' guided few-shot segmentation of volumetric images.
Medical Image Anal., 2020

Discriminative and Generative Models for Anatomical Shape Analysison Point Clouds with Deep Neural Networks.
CoRR, 2020

Controlling for Unknown Confounders in Neuroimaging.
CoRR, 2020

Adversarial Learned Molecular Graph Inference and Generation.
Proceedings of the Machine Learning and Knowledge Discovery in Databases, 2020

Bayesian Neural Networks for Uncertainty Estimation of Imaging Biomarkers.
Proceedings of the Machine Learning in Medical Imaging - 11th International Workshop, 2020

Importance Driven Continual Learning for Segmentation Across Domains.
Proceedings of the Machine Learning in Medical Imaging - 11th International Workshop, 2020

Recalibration of Neural Networks for Point Cloud Analysis.
Proceedings of the 8th International Conference on 3D Vision, 2020

2019
Recalibrating Fully Convolutional Networks With Spatial and Channel "Squeeze and Excitation" Blocks.
IEEE Trans. Medical Imaging, 2019

QuickNAT: A fully convolutional network for quick and accurate segmentation of neuroanatomy.
NeuroImage, 2019

Bayesian QuickNAT: Model uncertainty in deep whole-brain segmentation for structure-wise quality control.
NeuroImage, 2019

Likelihood-Free Inference and Generation of Molecular Graphs.
CoRR, 2019

BrainTorrent: A Peer-to-Peer Environment for Decentralized Federated Learning.
CoRR, 2019

Data Augmentation with Manifold Exploring Geometric Transformations for Increased Performance and Robustness.
CoRR, 2019

A Wide and Deep Neural Network for Survival Analysis from Anatomical Shape and Tabular Clinical Data.
Proceedings of the Machine Learning and Knowledge Discovery in Databases, 2019

Quantifying Confounding Bias in Neuroimaging Datasets with Causal Inference.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

'Project & Excite' Modules for Segmentation of Volumetric Medical Scans.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

An AutoML Approach for the Prediction of Fluid Intelligence from MRI-Derived Features.
Proceedings of the Adolescent Brain Cognitive Development Neurocognitive Prediction, 2019

Prediction of Fluid Intelligence from T1-Weighted Magnetic Resonance Images.
Proceedings of the Adolescent Brain Cognitive Development Neurocognitive Prediction, 2019

Manifold Exploring Data Augmentation with Geometric Transformations for Increased Performance and Robustness.
Proceedings of the Information Processing in Medical Imaging, 2019

Learning a Conditional Generative Model for Anatomical Shape Analysis.
Proceedings of the Information Processing in Medical Imaging, 2019

2018
DeepNAT: Deep convolutional neural network for segmenting neuroanatomy.
NeuroImage, 2018

Gaussian process uncertainty in age estimation as a measure of brain abnormality.
NeuroImage, 2018

Recalibrating Fully Convolutional Networks with Spatial and Channel 'Squeeze & Excitation' Blocks.
CoRR, 2018

Detect, Quantify, and Incorporate Dataset Bias: A Neuroimaging Analysis on 12, 207 Individuals.
CoRR, 2018

QuickNAT: Segmenting MRI Neuroanatomy in 20 seconds.
CoRR, 2018

Concurrent Spatial and Channel 'Squeeze & Excitation' in Fully Convolutional Networks.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

Inherent Brain Segmentation Quality Control from Fully ConvNet Monte Carlo Sampling.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

Deep Shape Analysis on Abdominal Organs for Diabetes Prediction.
Proceedings of the Shape in Medical Imaging, 2018

Deep Multi-structural Shape Analysis: Application to Neuroanatomy.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

InfiNet: Fully convolutional networks for infant brain MRI segmentation.
Proceedings of the 15th IEEE International Symposium on Biomedical Imaging, 2018

Abstract: Fast MRI Whole Brain Segmentation with Fully Convolutional Neural Networks.
Proceedings of the Bildverarbeitung für die Medizin 2018 - Algorithmen - Systeme, 2018

2017
Efficient Descriptor-Based Segmentation of Parotid Glands With Nonlocal Means.
IEEE Trans. Biomed. Eng., 2017

ReLayNet: Retinal Layer and Fluid Segmentation of Macular Optical Coherence Tomography using Fully Convolutional Network.
CoRR, 2017

Latent Processes Governing Neuroanatomical Change in Aging and Dementia.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017

Error Corrective Boosting for Learning Fully Convolutional Networks with Limited Data.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017

A Multi-armed Bandit to Smartly Select a Training Set from Big Medical Data.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017

Abtract: Shape Analysis in Human Brain MRI.
Proceedings of the Bildverarbeitung für die Medizin 2017 - Algorithmen - Systeme, 2017

2016
Domain adaptation for Alzheimer's disease diagnostics.
NeuroImage, 2016

2015
BrainPrint: A discriminative characterization of brain morphology.
NeuroImage, 2015

Diverse Landmark Sampling from Determinantal Point Processes for Scalable Manifold Learning.
CoRR, 2015

Keypoint Transfer Segmentation.
Proceedings of the Information Processing in Medical Imaging, 2015

Sampling from Determinantal Point Processes for Scalable Manifold Learning.
Proceedings of the Information Processing in Medical Imaging, 2015

A Feature-Based Approach to Big Data Analysis of Medical Images.
Proceedings of the Information Processing in Medical Imaging, 2015

2014
Blockface histology with optical coherence tomography: A comparison with Nissl staining.
NeuroImage, 2014

Gaussian Process Interpolation for Uncertainty Estimation in Image Registration.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

BrainPrint : Identifying Subjects by Their Brain.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

Atlas-Based Under-Segmentation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

2013
Simultaneous Registration of Multiple Images: Similarity Metrics and Efficient Optimization.
IEEE Trans. Pattern Anal. Mach. Intell., 2013

Contour-Driven Regression for Label Inference in Atlas-Based Segmentation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Sparse Projections of Medical Images onto Manifolds.
Proceedings of the Information Processing in Medical Imaging, 2013

2012
Manifold learning for image-based breathing gating in ultrasound and MRI.
Medical Image Anal., 2012

Entropy and Laplacian images: Structural representations for multi-modal registration.
Medical Image Anal., 2012

The 2D analytic signal for envelope detection and feature extraction on ultrasound images.
Medical Image Anal., 2012

Spectral Label Fusion.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

MRI Confirmed Prostate Tissue Classification with Laplacian Eigenmaps of Ultrasound RF Spectra.
Proceedings of the Machine Learning in Medical Imaging - Third International Workshop, 2012

A contextual maximum likelihood framework for modeling image registration.
Proceedings of the 2012 IEEE Conference on Computer Vision and Pattern Recognition, 2012

2011
Manifold learning for image-based breathing gating in MRI.
Proceedings of the Medical Imaging 2011: Image Processing, 2011

3D Stent Recovery from One X-Ray Projection.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011, 2011

Temporal Groupwise Registration for Motion Modeling.
Proceedings of the Information Processing in Medical Imaging, 2011

The 2D Analytic Signal on RF and B-Mode Ultrasound Images.
Proceedings of the Information Processing in Medical Imaging, 2011

Ultraschall-Mosaicing und Bewegungsmodellierung: Anwendungen der medizinischen Bildregistrierung.
Proceedings of the Ausgezeichnete Informatikdissertationen 2011, 2011

Ultrasound Mosaicing and Motion Modeling - Applications in Medical Image Registration.
PhD thesis, 2011

2010
Manifold Learning for Image-Based Breathing Gating with Application to 4D Ultrasound.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2010

Manifold learning for patient position detection in MRI.
Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010

Structural image representation for image registration.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2010

Manifold Learning for Multi-Modal Image Registration.
Proceedings of the British Machine Vision Conference, 2010

2009
Sphere extraction in MR images with application to whole-body MRI.
Proceedings of the Medical Imaging 2009: Image Processing, 2009

Alignment of Viewing-Angle Dependent Ultrasound Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009

Similarity metrics and efficient optimization for simultaneous registration.
Proceedings of the 2009 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2009), 2009

Towards an Estimation of Acoustic Impedance from Multiple Ultrasound Images.
Proceedings of the Bildverarbeitung für die Medizin 2009: Algorithmen - Systeme, 2009

MRI Composing for Whole Body Imaging.
Proceedings of the Bildverarbeitung für die Medizin 2009: Algorithmen - Systeme, 2009

2008
Ultrasound specific similarity measures for three-dimensional mosaicing.
Proceedings of the Medical Imaging 2008: Image Processing, 2008

Deformable Mosaicing for Whole-Body MRI.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2008

Estimation of acoustic impedance from multiple ultrasound images with application to spatial compounding.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2008

2007
Three-Dimensional Ultrasound Mosaicing.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

2006
Patient Position Detection for SAR Optimization in Magnetic Resonance Imaging.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2006


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