Chigusa Kobayashi

Orcid: 0000-0002-5603-4619

According to our database1, Chigusa Kobayashi authored at least 8 papers between 2016 and 2023.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Links

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Bibliography

2023
Acceleration of generalized replica exchange with solute tempering simulations of large biological systems on massively parallel supercomputer.
J. Comput. Chem., 2023

2022
Implementation of residue-level coarse-grained models in GENESIS for large-scale molecular dynamics simulations.
PLoS Comput. Biol., 2022

2021
Coarse-Grained Modeling of Multiple Pathways in Conformational Transitions of Multi-Domain Proteins.
J. Chem. Inf. Model., 2021

New parallel computing algorithm of molecular dynamics for extremely huge scale biological systems.
J. Comput. Chem., 2021

2019
Scaling molecular dynamics beyond 100, 000 processor cores for large-scale biophysical simulations.
J. Comput. Chem., 2019

2017
Flexible fitting to cryo-EM density map using ensemble molecular dynamics simulations.
J. Comput. Chem., 2017

GENESIS 1.1: A hybrid-parallel molecular dynamics simulator with enhanced sampling algorithms on multiple computational platforms.
J. Comput. Chem., 2017

2016
Parallel implementation of 3D FFT with volumetric decomposition schemes for efficient molecular dynamics simulations.
Comput. Phys. Commun., 2016


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