Chien-Yu Chen
Orcid: 0000-0002-6940-6389Affiliations:
- National Taiwan University, Department of Bio-Industrial Mechatronics Engineering
According to our database1,
Chien-Yu Chen
authored at least 53 papers
between 2000 and 2024.
Collaborative distances:
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Bibliography
2024
CAVACHON: a hierarchical variational autoencoder to integrate multi-modal single-cell data.
CoRR, 2024
Evaluating the Performance of Protein Structure Prediction in Detecting Structural Changes of Pathogenic Nonsynonymous Single Nucleotide Variants.
Proceedings of the 17th International Joint Conference on Biomedical Engineering Systems and Technologies, 2024
2022
pubmedKB: an interactive web server for exploring biomedical entity relations in the biomedical literature.
Nucleic Acids Res., 2022
2021
Bioinform., 2021
Evaluation of using WGS/WES to characterize ACMG actionable genes in genetic testing reports.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021
2020
Comprehensive Study of Keywords for Sequence-Based Automatic Annotation of Protein Functions.
Proceedings of the 20th IEEE International Conference on Bioinformatics and Bioengineering, 2020
2019
Predicting Pathogenic Non-coding Variants on Imbalanced Data Set using Cluster Ensemble Sampling.
Proceedings of the 19th IEEE International Conference on Bioinformatics and Bioengineering, 2019
2018
Advanced Orientation Robust Face Detection Algorithm Using Prominent Features and Hybrid Learning Techniques.
Proceedings of the IEEE Visual Communications and Image Processing, 2018
Advanced Ear Detection Algorithm Using Faster R-CNN, Refocus Filters, and the Gradient Map.
Proceedings of the 23rd IEEE International Conference on Digital Signal Processing, 2018
2013
Nucleic Acids Res., 2013
2012
Nucleic Acids Res., 2012
<i>De novo</i> motif discovery facilitates identification of interactions between transcription factors in <i>Saccharomyces cerevisiae</i>.
Bioinform., 2012
2011
Algorithms Mol. Biol., 2011
2010
Predicting DNA-binding locations and orientation on proteins using knowledge-based learning of geometric properties.
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2010
2009
Nucleic Acids Res., 2009
Statistical identification of gene association by CID in application of constructing ER regulatory network.
BMC Bioinform., 2009
2008
Nucleic Acids Res., 2008
Cross-generation and cross-laboratory predictions of Affymetrix microarrays by rank-based methods.
J. Biomed. Informatics, 2008
2007
Identification of hot regions in protein-protein interactions by sequential pattern mining.
BMC Bioinform., 2007
Prediction of Protein Secondary Structures with a Novel Kernel Density Estimator.
Proceedings of the 2007 International Conference on Machine Learning; Models, 2007
Proceedings of the Bioinformatics Research and Development, First International Conference, 2007
2006
Pattern Recognit., 2006
Exploiting homogeneity in protein sequence clusters for construction of protein family hierarchies.
Pattern Recognit., 2006
MAGIIC-PRO: detecting functional signatures by efficient discovery of long patterns in protein sequences.
Nucleic Acids Res., 2006
Protein disorder prediction by condensed PSSM considering propensity for order or disorder.
BMC Bioinform., 2006
Efficient Discovery of Structural Motifs from Protein Sequences with Combination of Flexible Intra- and Inter-block Gap Constraints.
Proceedings of the Advances in Knowledge Discovery and Data Mining, 2006
2005
Data classification with radial basis function networks based on a novel kernel density estimation algorithm.
IEEE Trans. Neural Networks, 2005
A statistics-based approach to control the quality of subclusters in incremental gravitational clustering.
Pattern Recognit., 2005
Analysis and summarization of correlations in data cubes and its application in microarray data analysis.
Intell. Data Anal., 2005
Proceedings of the IEEE International Joint Conference on Neural Networks, 2005
A novel radial basis function network classifier with centers set by hierarchical clustering.
Proceedings of the IEEE International Joint Conference on Neural Networks, 2005
Prediction of Outer Membrane Proteins by Support Vector Machines Using Combinations of Gapped Amino Acid Pair Compositions.
Proceedings of the Fifth IEEE International Symposium on Bioinformatic and Bioengineering (BIBE 2005), 2005
Genetic algorithms and silhouette measures applied to microarray data classification.
Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore, 2005
2004
ProteMiner-SSM: a web server for efficient analysis of similar protein tertiary substructures.
Nucleic Acids Res., 2004
Int. J. Pattern Recognit. Artif. Intell., 2004
Incremental generation of summarized clustering hierarchy for protein family analysis.
Bioinform., 2004
The Combination of Kaiser Window and Moving Average for the Low-Pass Filtering of the Remote ECG Signals.
Proceedings of the 17th IEEE Symposium on Computer-Based Medical Systems (CBMS 2004), 2004
An Efficient Mechanism for Prediction of Protein-Ligand Interactions Based on Analysis of Protein Tertiary Substructures.
Proceedings of the 4th IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2004), 2004
2003
IEEE Trans. Inf. Theory, 2003
Oper. Res. Lett., 2003
Proceedings of the IEEE International Conference on Systems, 2003
Expediting protein structural analysis with an efficient kernel density estimation algorithm.
Proceedings of the Fifth International Symposium on Multimedia Software Engineering, 2003
Design of an incremental clustering package for protein function and family analysis.
Proceedings of the Fifth International Symposium on Multimedia Software Engineering, 2003
2002
Proceedings of the Advances in Knowledge Discovery and Data Mining, 2002
Proceedings of the Data Mining and Knowledge Discovery: Theory, 2002
2001
J. VLSI Signal Process., 2001
Proceedings of the Principles of Data Mining and Knowledge Discovery, 2001
2000
Proceedings of the IEEE International Symposium on Circuits and Systems, 2000