Cheng-Yan Kao

According to our database1, Cheng-Yan Kao authored at least 84 papers between 1993 and 2013.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of two.

Timeline

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Bibliography

2013
EBARDenovo: highly accurate <i>de novo</i> assembly of RNA-Seq with efficient chimera-detection.
Bioinform., 2013

Differential network biology reveals a positive correlation between a novel protein-protein interaction and cancer cells migration.
Proceedings of the 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2013

2012
The Impact of Normalization and Phylogenetic Information on Estimating the Distance for Metagenomes.
IEEE ACM Trans. Comput. Biol. Bioinform., 2012

A Multiclass Classification Tool Using Cloud Computing Architecture.
Proceedings of the International Conference on Advances in Social Networks Analysis and Mining, 2012

2011
Construction and analysis of the protein-protein interaction networks for schizophrenia, bipolar disorder, and major depression.
BMC Bioinform., 2011

A quantitative analysis of monochromaticity in genetic interaction networks.
BMC Bioinform., 2011

MetaABC - an integrated metagenomics platform for data adjustment, binning and clustering.
Bioinform., 2011

2009
Modeling Taiwanese POS Tagging Using Statistical Methods and Mandarin Training Data.
Int. J. Comput. Linguistics Chin. Lang. Process., 2009

Inferring a transcriptional regulatory network of the cytokinesis-related genes by network component analysis.
BMC Syst. Biol., 2009

POINeT: protein interactome with sub-network analysis and hub prioritization.
BMC Bioinform., 2009

Combining Agent-Based Models with Stochastic Differential Equations for Gene Regulatory Networks.
Proceedings of the Ninth IEEE International Conference on Bioinformatics and Bioengineering, 2009

2008
Ortholog-based protein-protein interaction prediction and its application to inter-species interactions.
BMC Bioinform., 2008

Evolutionary conservation of DNA-contact residues in DNA-binding domains.
BMC Bioinform., 2008

中文名詞組的辨識:監督式與半監督式學習法的實驗 (Chinese NP Chunking: Experiments with Supervised, and Semisupervised Learning) [In Chinese].
Proceedings of the 20th Conference on Computational Linguistics and Speech Processing, 2008

利用統計方法及中文訓練資料處理台語文詞性標記 (Modeling Taiwanese POS tagging with statistical methods and Mandarin training data) [In Chinese].
Proceedings of the 20th Conference on Computational Linguistics and Speech Processing, 2008

Evolutionary Conservation and Interacting Preference for Identifying Protein-DNA Interactions.
Proceedings of the International Multisymposiums on Computer and Computational Sciences, 2008

2007
VNTRDB: a bacterial variable number tandem repeat locus database.
Nucleic Acids Res., 2007

Modeling Taiwanese Southern-Min Tone Sandhi Using Rule-Based Methods.
Int. J. Comput. Linguistics Chin. Lang. Process., 2007

Reconstruction of human protein interolog network using evolutionary conserved network.
BMC Bioinform., 2007

Detection of the inferred interaction network in hepatocellular carcinoma from EHCO (Encyclopedia of Hepatocellular Carcinoma genes Online).
BMC Bioinform., 2007

Portable Patient Information Integration System for Patient Safety Improvement.
Proceedings of the Frontiers of High Performance Computing and Networking ISPA 2007 Workshops, 2007

Positioning System in Taipei Children's Museum of Transportation and Communication.
Proceedings of the Frontiers of High Performance Computing and Networking ISPA 2007 Workshops, 2007

Evolutionary Conservation of DNA-Contact residues in DNA-binding Domains.
Proceedings of the Proceeding of the Second International Multi-Symposium of Computer and Computational Sciences (IMSCCS 2007), 2007

A genetic algorithm for resident physician scheduling problem.
Proceedings of the Genetic and Evolutionary Computation Conference, 2007

2006
Compact Genetic Algorithm for Performance Improvement in Hierarchical Sensor Networks Management.
J. Interconnect. Networks, 2006

Combining Single-pass and Multiple-pass Heuristics for Group Flexible Flow-shop Scheduling Problems.
Proceedings of the IEEE International Conference on Systems, 2006

Simple Software for Microarray Image Analysis.
Proceedings of the Third Canadian Conference on Computer and Robot Vision (CRV 2006), 2006

2005
Cysteine separations profiles on protein sequences infer disulfide connectivity.
Bioinform., 2005

Improving disulfide connectivity prediction with sequential distance between oxidized cysteines.
Bioinform., 2005

Integrated minimum-set primers and unique probe design algorithms for differential detection on symptom-related pathogens.
Bioinform., 2005

A stochastic differential equation model for quantifying transcriptional regulatory network in <i>Saccharomyces cerevisiae</i>.
Bioinform., 2005

台語變調系統實作研究 (A Study on Implementation of Taiwanese Tone Sandhi System) [In Chinese].
Proceedings of the 17th Conference on Computational Linguistics and Speech Processing, 2005

A Study on Implementation of Southern-Min Taiwanese Tone Sandhi System.
Proceedings of the 19st Pacific Asia Conference on Language, Information and Computation, 2005

Compact Genetic Algorithm for Performance Improvement in Hierarchical Sensor Networks Management.
Proceedings of the 8th International Symposium on Parallel Architectures, 2005

Sensor Network Design and Implementation for Health Telecare and Diagnosis Assistance Applications.
Proceedings of the 11th International Conference on Parallel and Distributed Systems, 2005

Compact genetic algorithm for active interval scheduling in hierarchical sensor networks.
Proceedings of the Genetic and Evolutionary Computation Conference, 2005

Improving EAX with restricted 2-opt.
Proceedings of the Genetic and Evolutionary Computation Conference, 2005

GEMPLS: A New QSAR Method Combining Generic Evolutionary Method and Partial Least Squares.
Proceedings of the Applications of Evolutionary Computing, 2005

2004
An evolutionary algorithm for large traveling salesman problems.
IEEE Trans. Syst. Man Cybern. Part B, 2004

An Evolutionary Approach for Gene Expression Patterns.
IEEE Trans. Inf. Technol. Biomed., 2004

Some issues of designing genetic algorithms for traveling salesman problems.
Soft Comput., 2004

POINT: a database for the prediction of protein-protein interactions based on the orthologous interactome.
Bioinform., 2004

Designing Multiple-Use Primer Set for Multiplex PCR by Using Compact GAs.
Proceedings of the Parallel Problem Solving from Nature, 2004

Disulfide Connectivity Prediction Using Support Vector Machine and Novel Features.
Proceedings of the International Conference on Mathematics and Engineering Techniques in Medicine and Biological Scienes, 2004

A Tool to Determine the Specificity of Antisense Oligonucleotide.
Proceedings of the International Conference on Mathematics and Engineering Techniques in Medicine and Biological Scienes, 2004

Discovering Statistically Significant Clusters by Using Iterative Genetic Algorithms in Gene Expression Data.
Proceedings of the International Conference on Mathematics and Engineering Techniques in Medicine and Biological Scienes, 2004

Exploring of Radiation Resistance from Bacterium Deinococcus radiodurans R1 by Amino Acid Compositions of Proteins: View from Comparative Whole Protein Sequences.
Proceedings of the International Conference on Mathematics and Engineering Techniques in Medicine and Biological Scienes, 2004

Optimal Designs for Microarray Experiments.
Proceedings of the 7th International Symposium on Parallel Architectures, 2004

Combination Methods in Microarray Analysis.
Proceedings of the 7th International Symposium on Parallel Architectures, 2004

Comparative Molecular Binding Energy Analysis of HIV-1 Protease Inhibitors Using Genetic Algorithm-Based Partial Least Squares Method.
Proceedings of the Genetic and Evolutionary Computation, 2004

Identifying Significant Genes from Microarray Data.
Proceedings of the 4th IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2004), 2004

Automatically Predicting Possible Loci of Variable Number of Tandem Repeats.
Proceedings of the 4th IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2004), 2004

2003
Ranking Genes for Discriminability on Microarray Data.
J. Inf. Sci. Eng., 2003

A Data Mining Method to Predict Transcriptional Regulatory Sites Based on Differentially Expressed Genes in Human Genome.
Proceedings of the 3rd IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2003), 2003

2002
Applying Genetic Algorithms To Finding The Optimal Gene Order In Displaying The Microarray Data.
Proceedings of the GECCO 2002: Proceedings of the Genetic and Evolutionary Computation Conference, 2002

Solving traveling salesman problems by combining global and local search mechanisms.
Proceedings of the 2002 Congress on Evolutionary Computation, 2002

2001
A Robust Evolutionary Algorithm for Training Neural Networks.
Neural Comput. Appl., 2001

A Theoetical Aspect of a Stochastic Sketching Method for Global Optimization.
J. Inf. Sci. Eng., 2001

Optical Coating Designs Using the Family Competition Evolutionary Algorithm.
Evol. Comput., 2001

A Genetic Algorithm for Multiple Sequence Alignment.
Proceedings of the Computer science and biology: Proceedings of the German Conference on Bioinformatics, 2001

Mining Putative Regulatory Elements in Gene Promoter Regions.
Proceedings of the Computer science and biology: Proceedings of the German Conference on Bioinformatics, 2001

Integrating adaptive mutations and family competition with differential evolution for flexible ligand docking.
Proceedings of the 2001 Congress on Evolutionary Computation, 2001

Discovering Common Structural Motifs from SSU 16 S Ribosomal RNA Secondary Structures.
Proceedings of the 2nd IEEE International Symposium on Bioinformatics and Bioengineering, 2001

2000
A family competition evolutionary algorithm for automated docking of flexible ligands to proteins.
IEEE Trans. Inf. Technol. Biomed., 2000

Integrating adaptive mutations and family competition into genetic algorithms as function optimizer.
Soft Comput., 2000

Flexible ligand docking using a robust evolutionary algorithm.
J. Comput. Chem., 2000

A Genetic Algorithm with Adaptive Mutations and Family Competition for Training Neural Networks.
Int. J. Neural Syst., 2000

An Evolutionary Algorithms to Training Neural Networks for a Two-Spiral Problem.
Proceedings of the Genetic and Evolutionary Computation Conference (GECCO '00), 2000

A Genetic Algorithm for Physical Mapping Problems.
Proceedings of the Genetic and Evolutionary Computation Conference (GECCO '00), 2000

Using Genetic Algorithms to Solve Multiple Sequence Alignments.
Proceedings of the Genetic and Evolutionary Computation Conference (GECCO '00), 2000

Materialized View Selection in a Data Warehouse Using Evolutionary Algorithms.
Proceedings of the Genetic and Evolutionary Computation Conference (GECCO '00), 2000

1999
Stochastic sketching: a new method for global optimization.
Soft Comput., 1999

Resolution of simple plant location problems using an adapted genetic algorithm.
Proceedings of the 1999 Congress on Evolutionary Computation, 1999

Materialized view selection using genetic algorithms in a data warehouse system.
Proceedings of the 1999 Congress on Evolutionary Computation, 1999

1998
An Evolutionary Algorithm for Synthesizing Optical Thin-Film Designs.
Proceedings of the Parallel Problem Solving from Nature, 1998

Molecular binding in structure-based drug design: a case study of the population-based annealing genetic algorithms.
Proceedings of the Tenth IEEE International Conference on Tools with Artificial Intelligence, 1998

A New Evolutionary Approach to Developing Neural Autonomous Agents.
Proceedings of the IEEE International Conference on Robotics and Automation, 1998

1997
A Continuous Genetic Algorithm for Global Optimization.
Proceedings of the 7th International Conference on Genetic Algorithms, 1997

Applying Family Competition to Evolution Strategies for Constrained Optimization.
Proceedings of the Evolutionary Programming VI, 6th International Conference, 1997

1996
A Combined Evolutionary Algorithm for Real Parameters Optimization.
Proceedings of 1996 IEEE International Conference on Evolutionary Computation, 1996

1994
Using an Annealing Genetic Algorithm to Solve Global Energy Minimazation Problem.
Proceedings of the Sixth International Conference on Tools with Artificial Intelligence, 1994

A Genetic Algorithm Approach for Set Covering Problems.
Proceedings of the First IEEE Conference on Evolutionary Computation, 1994

A Genetic Algorithm for Database Query Optimization.
Proceedings of the First IEEE Conference on Evolutionary Computation, 1994

1993
Applying the genetic approach to simulated annealing in solving some NP-hard problems.
IEEE Trans. Syst. Man Cybern., 1993


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