Charles D. Johnson

According to our database, Charles D. Johnson authored at least 7 papers between 2011 and 2018.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2018

Examining De Novo Transcriptome Assemblies via a Quality Assessment Pipeline.

Noushin Ghaffari, Osama A. Arshad, Hyundoo Jeong, John Thiltges, Michael F. Criscitiello, Byung-Jun Yoon, Aniruddha Datta, Charles D. Johnson

IEEE ACM Trans. Comput. Biol. Bioinform., 2018

2016

Computational Considerations in Transcriptome Assemblies and Their Evaluation, using High Quality Human RNA-Seq data.

Noushin Ghaffari, Jordi Abante, Raminder Singh, Philip D. Blood, Charles D. Johnson

Proceedings of the XSEDE16 Conference on Diversity, 2016

2014

De novo transcriptome assemblies and annotation for pacifie whiteleg shrimp.

Noushin Ghaffari, Osama A. Arshad, Hyundoo Jeong, John Thiltges, Michael F. Criscitiello, Byung-Jun Yoon, Aniruddha Datta, Charles D. Johnson

Proceedings of the 2014 IEEE Global Conference on Signal and Information Processing, 2014

2013

Modeling the Next Generation Sequencing sample processing pipeline for the purposes of classification.

Noushin Ghaffari, Mohammadmahdi R. Yousefi, Charles D. Johnson, Ivan Ivanov, Edward R. Dougherty

BMC Bioinform., 2013

2012

Fast DNA barcode generating algorithm using Radix Coding method.

Amir Nikooienejad, Richard Metz, Byung-Jun Yoon, Charles D. Johnson

Proceedings of the Proceedings 2012 IEEE International Workshop on Genomic Signal Processing and Statistics, 2012

OBGene: Optimal barcode generator for NGS experiments.

Esmaeil Atashpaz-Gargari, Mohammad Shahrokh Esfahani, Richard Metz, Charles D. Johnson

Proceedings of the Proceedings 2012 IEEE International Workshop on Genomic Signal Processing and Statistics, 2012

2011

Evaluation of the coverage and depth of transcriptome by RNA-Seq in chickens.

Ying Wang, Noushin Ghaffari, Charles D. Johnson, Ulisses M. Braga-Neto, Hui Wang, Rui Chen, Huaijun Zhou

BMC Bioinform., 2011