Chao Yang

According to our database, Chao Yang authored at least 89 papers between 2002 and 2024.

Collaborative distances:

• Dijkstra number of three.
• Erdős number of three.

2024

Explicit Quantum Circuits for Block Encodings of Certain Sparse Matrices.

Daan Camps, Lin Lin, Roel Van Beeumen, Chao Yang

SIAM J. Matrix Anal. Appl., March, 2024

Accelerating Eigenvalue Computation for Nuclear Structure Calculations via Perturbative Corrections.

Dong Min Roh, Esmond Ng, Chao Yang, Dean Lee, Pieter Maris, James P. Vary

CoRR, 2024

2023

Probing reaction channels via reinforcement learning.

Senwei Liang, Aditya N. Singh, Yuanran Zhu, David T. Limmer, Chao Yang

Mach. Learn. Sci. Technol., December, 2023

Hybrid eigensolvers for nuclear configuration interaction calculations.

Abdullah Alperen, Hasan Metin Aktulga, Pieter Maris, Chao Yang

Comput. Phys. Commun., November, 2023

Analyzing and predicting non-equilibrium many-body dynamics via dynamic mode decomposition.

Jia Yin, Yang-hao Chan, Felipe H. da Jornada, Diana Qiu, Chao Yang, Steven G. Louie

J. Comput. Phys., March, 2023

A machine learning pipeline for membrane segmentation of cryo-electron tomograms.

Li Zhou, Chao Yang, Weiguo Gao, Talita Perciano, Karen M. Davies, Nicholas K. Sauter

J. Comput. Sci., January, 2023

Learning nonlinear integral operators via Recurrent Neural Networks and its application in solving Integro-Differential Equations.

Hardeep Bassi, Yuanran Zhu, Senwei Liang, Jia Yin, Cian C. Reeves, Vojtech Vlcek, Chao Yang

CoRR, 2023

Fault-Tolerant LOBPCG for Nuclear CI Calculations.

Meiyue Shao, Dossay Oryspayev, Chao Yang, Pieter Maris, Brandon G. Cook

Proceedings of the International Conference on High Performance Computing in Asia-Pacific Region, 2023

2022

Graph Representation Learning for Similarity Stocks Analysis.

Boyao Zhang, Chao Yang, Haikuo Zhang, Zongguo Wang, Jingqi Sun, Lihua Wang, Yonghua Zhao, Yangang Wang

J. Signal Process. Syst., 2022

Using dynamic mode decomposition to predict the dynamics of a two-time non-equilibrium Green's function.

Jia Yin, Yang-hao Chan, Felipe H. da Jornada, Diana Qiu, Steven G. Louie, Chao Yang

J. Comput. Sci., 2022

Accelerating an iterative eigensolver for nuclear structure configuration interaction calculations on GPUs using OpenACC.

Pieter Maris, Chao Yang, Dossay Oryspayev, Brandon Cook

J. Comput. Sci., 2022

Low rank approximation in simulations of quantum algorithms.

Linjian Ma, Chao Yang

J. Comput. Sci., 2022

Exploring Potential Energy Surfaces Using Reinforcement Machine Learning.

Alexis W. Mills, Joshua J. Goings, David Beck, Chao Yang, Xiaosong Li

J. Chem. Inf. Model., 2022

Enhancing scalability of a matrix-free eigensolver for studying many-body localization.

Roel Van Beeumen, Khaled Z. Ibrahim, Gregory D. Kahanamoku-Meyer, Norman Y. Yao, Chao Yang

Int. J. High Perform. Comput. Appl., 2022

KSSOLV 2.0: An efficient MATLAB toolbox for solving the Kohn-Sham equations with plane-wave basis set.

Shizhe Jiao, Zhenlin Zhang, Kai Wu, Lingyun Wan, Huanhuan Ma, Jielan Li, Sheng Chen, Xinming Qin, Jie Liu, Zijing Ding, Jinlong Yang, Yingzhou Li, Wei Hu, Lin Lin, Chao Yang

Comput. Phys. Commun., 2022

Explicit Quantum Circuits for Block Encodings of Certain Sparse Matrice.

Daan Camps, Lin Lin, Roel Van Beeumen, Chao Yang

CoRR, 2022

Performance Portability of Sparse Block Diagonal Matrix Multiple Vector Multiplications on GPUs.

Khaled Z. Ibrahim, Chao Yang, Pieter Maris

Proceedings of the IEEE/ACM International Workshop on Performance, 2022

2021

Achieving performance portability in Gaussian basis set density functional theory on accelerator based architectures in NWChemEx.

David B. Williams-Young, Abhishek Bagusetty, Wibe A. de Jong, Douglas Doerfler, Hubertus Johannes Jacobus Van Dam, Álvaro Vázquez-Mayagoitia, Theresa L. Windus, Chao Yang

Parallel Comput., 2021

A greedy algorithm for computing eigenvalues of a symmetric matrix with localized eigenvectors.

Taylor M. Hernandez, Roel Van Beeumen, Mark A. Caprio, Chao Yang

Numer. Linear Algebra Appl., 2021

Quantum Fourier transform revisited.

Daan Camps, Roel Van Beeumen, Chao Yang

Numer. Linear Algebra Appl., 2021

Randomized Algorithms for Scientific Computing (RASC).

Aydin Buluç, Tamara G. Kolda, Stefan M. Wild, Mihai Anitescu, Anthony M. DeGennaro, John Jakeman, Chandrika Kamath, Ramakrishnan Kannan, Miles E. Lopes, Per-Gunnar Martinsson, Kary L. Myers, Jelani Nelson, Juan M. Restrepo, C. Seshadhri, Draguna L. Vrabie, Brendt Wohlberg, Stephen J. Wright, Chao Yang, Peter Zwart

CoRR, 2021

A Flexible Power Method for Solving Infinite Dimensional Tensor Eigenvalue Problems.

Roel Van Beeumen, Lana Perisa, Daniel Kressner, Chao Yang

CoRR, 2021

Accelerating Quantum Many-Body Configuration Interaction with Directives.

Brandon Cook, Patrick J. Fasano, Pieter Maris, Chao Yang, Dossay Oryspayev

Proceedings of the Accelerator Programming Using Directives - 8th International Workshop, 2021

Similarity Analysis of Knowledge Graph-based Company Embedding for Stocks Portfolio.

Boyao Zhang, Zhongrui Li, Chao Yang, Zongguo Wang, Yonghua Zhao, Jingqi Sun, Lihua Wang

Proceedings of the 6th IEEE International Conference on Smart Cloud, 2021

Performance Modeling and Tuning for DFT Calculations on Heterogeneous Architectures.

Hadia Ahmed, David B. Williams-Young, Khaled Z. Ibrahim, Chao Yang

Proceedings of the IEEE International Parallel and Distributed Processing Symposium Workshops, 2021

2020

A Shift Selection Strategy for Parallel Shift-invert Spectrum Slicing in Symmetric Self-consistent Eigenvalue Computation.

David B. Williams-Young, Paul G. Beckman, Chao Yang

ACM Trans. Math. Softw., 2020

Mesh independence of the generalized Davidson algorithm.

C. T. Kelley, Jerry Bernholc, E. L. Briggs, Steven P. Hamilton, Lin Lin, Chao Yang

J. Comput. Phys., 2020

ELSI - An open infrastructure for electronic structure solvers.

Victor Wen-zhe Yu, Carmen Campos, William Dawson, Alberto García, Ville Havu, Ben Hourahine, William P. Huhn, Mathias Jacquelin, Weile Jia, Murat Keçeli, Raul Laasner, Yingzhou Li, Lin Lin, Jianfeng Lu, Jonathan Moussa, José E. Román, Álvaro Vázquez-Mayagoitia, Chao Yang, Volker Blum

Comput. Phys. Commun., 2020

Scalable implementation of polynomial filtering for density functional theory calculation in PARSEC.

Kai-Hsin Liou, Chao Yang, James R. Chelikowsky

Comput. Phys. Commun., 2020

Solving the k-sparse Eigenvalue Problem with Reinforcement Learning.

Li Zhou, Lihao Yan, Mark A. Caprio, Weiguo Gao, Chao Yang

CoRR, 2020

On the Efficient Evaluation of the Exchange Correlation Potential on Graphics Processing Unit Clusters.

David B. Williams-Young, Wibe A. de Jong, Hubertus Johannes Jacobus Van Dam, Chao Yang

CoRR, 2020

Evaluation of the Communication Motif for a Distributed Eigensolver using the SST Network Simulation Tool.

Md. Afibuzzaman, Pieter Maris, Taylor L. Groves, Dossay Oryspayev, Brandon Cook, Chao Yang, Hasan Metin Aktulga

Proceedings of the 2020 IEEE/ACM Performance Modeling, 2020

Parallel Shift-Invert Spectrum Slicing on Distributed Architectures with GPU Accelerators.

David B. Williams-Young, Chao Yang

Proceedings of the ICPP 2020: 49th International Conference on Parallel Processing, 2020

A Scalable Matrix-Free Iterative Eigensolver for Studying Many-Body Localization.

Roel Van Beeumen, Gregory D. Kahanamoku-Meyer, Norman Y. Yao, Chao Yang

Proceedings of the International Conference on High Performance Computing in Asia-Pacific Region, 2020

2019

Large-scale GW calculations on pre-exascale HPC systems.

Mauro Del Ben, Felipe H. da Jornada, Andrew Canning, Nathan Wichmann, Karthik Raman, Ruchira Sasanka, Chao Yang, Steven G. Louie, Jack Deslippe

Comput. Phys. Commun., 2019

2018

A Robust and Efficient Implementation of LOBPCG.

Jed A. Duersch, Meiyue Shao, Chao Yang, Ming Gu

SIAM J. Sci. Comput., 2018

A Structure Preserving Lanczos Algorithm for Computing the Optical Absorption Spectrum.

Meiyue Shao, Felipe H. da Jornada, Lin Lin, Chao Yang, Jack Deslippe, Steven G. Louie

SIAM J. Matrix Anal. Appl., 2018

PSelInv - A distributed memory parallel algorithm for selected inversion: The non-symmetric case.

Mathias Jacquelin, Lin Lin, Chao Yang

Parallel Comput., 2018

Computing resonant modes of accelerator cavities by solving nonlinear eigenvalue problems via rational approximation.

Roel Van Beeumen, Osni Marques, Esmond G. Ng, Chao Yang, Zhaojun Bai, Lixin Ge, Oleksiy Kononenko, Zenghai Li, Cho-Kuen Ng, Liling Xiao

J. Comput. Phys., 2018

ELSI: A unified software interface for Kohn-Sham electronic structure solvers.

Victor Wen-zhe Yu, Fabiano Corsetti, Alberto García, William P. Huhn, Mathias Jacquelin, Weile Jia, Björn Lange, Lin Lin, Jianfeng Lu, Wenhui Mi, Ali Seifitokaldani, Álvaro Vázquez-Mayagoitia, Chao Yang, Haizhao Yang, Volker Blum

Comput. Phys. Commun., 2018

Accelerating nuclear configuration interaction calculations through a preconditioned block iterative eigensolver.

Meiyue Shao, Hasan Metin Aktulga, Chao Yang, Esmond G. Ng, Pieter Maris, James P. Vary

Comput. Phys. Commun., 2018

Deep Learning: Extrapolation Tool for Ab Initio Nuclear Theory.

Gianina Alina Negoita, James P. Vary, Glenn R. Luecke, Pieter Maris, Andrey M. Shirokov, Ik Jae Shin, Youngman Kim, Esmond G. Ng, Chao Yang, Matthew Lockner, Gurpur M. Prabhu

CoRR, 2018

Accelerating Optical Absorption Spectra and Exciton Energy Computation via Interpolative Separable Density Fitting.

Wei Hu, Meiyue Shao, Andrea Cepellotti, Felipe H. da Jornada, Lin Lin, Kyle Thicke, Chao Yang, Steven G. Louie

Proceedings of the Computational Science - ICCS 2018, 2018

A Left-Looking Selected Inversion Algorithm and Task Parallelism on Shared Memory Systems.

Mathias Jacquelin, Lin Lin, Weile Jia, Yonghua Zhao, Chao Yang

Proceedings of the International Conference on High Performance Computing in Asia-Pacific Region, 2018

2017

A High Performance Block Eigensolver for Nuclear Configuration Interaction Calculations.

Hasan Metin Aktulga, Md. Afibuzzaman, Samuel Williams, Aydin Buluç, Meiyue Shao, Chao Yang, Esmond G. Ng, Pieter Maris, James P. Vary

IEEE Trans. Parallel Distributed Syst., 2017

PSelInv - A Distributed Memory Parallel Algorithm for Selected Inversion: The Symmetric Case.

Mathias Jacquelin, Lin Lin, Chao Yang

ACM Trans. Math. Softw., 2017

Adaptive local basis set for Kohn-Sham density functional theory in a discontinuous Galerkin framework II: Force, vibration, and molecular dynamics calculations.

Gaigong Zhang, Lin Lin, Wei Hu, Chao Yang, John E. Pask

J. Comput. Phys., 2017

Efficient block preconditioned eigensolvers for linear response time-dependent density functional theory.

Eugene Vecharynski, Jiri Brabec, Meiyue Shao, Niranjan Govind, Chao Yang

Comput. Phys. Commun., 2017

A Model Order Reduction Algorithm for Estimating the Absorption Spectrum.

Roel Van Beeumen, David B. Williams-Young, Joseph M. Kasper, Chao Yang, Esmond G. Ng, Xiaosong Li

CoRR, 2017

2016

A Thick-Restart Lanczos Algorithm with Polynomial Filtering for Hermitian Eigenvalue Problems.

Ruipeng Li, Yuanzhe Xi, Eugene Vecharynski, Chao Yang, Yousef Saad

SIAM J. Sci. Comput., 2016

Approximating Spectral Densities of Large Matrices.

Lin Lin, Yousef Saad, Chao Yang

SIAM Rev., 2016

Trace-Penalty Minimization for Large-Scale Eigenspace Computation.

Zaiwen Wen, Chao Yang, Xin Liu, Yin Zhang

J. Sci. Comput., 2016

Reduced-cost sparsity-exploiting algorithm for solving coupled-cluster equations.

Jiri Brabec, Chao Yang, Evgeny Epifanovsky, Anna I. Krylov, Esmond Ng

J. Comput. Chem., 2016

molgw 1: Many-body perturbation theory software for atoms, molecules, and clusters.

Fabien Bruneval, Tonatiuh Rangel, Samia M. Hamed, Meiyue Shao, Chao Yang, Jeffrey B. Neaton

Comput. Phys. Commun., 2016

BSEPACK User's Guide.

Meiyue Shao, Chao Yang

CoRR, 2016

Enhancing Scalability and Load Balancing of Parallel Selected Inversion via Tree-Based Asynchronous Communication.

Mathias Jacquelin, Lin Lin, Nathan Wichmann, Chao Yang

Proceedings of the 2016 IEEE International Parallel and Distributed Processing Symposium, 2016

Convolutional neural networks at the interface of physical and digital data.

Daniela Ushizima, Chao Yang, Singanallur V. Venkatakrishnan, Flávio H. D. Araújo, Romuere Rôdrigues Veloso e Silva, Haoran Tang, Joao Vitor Mascarenhas, Alexander Hexemer, Dilworth Parkinson, James A. Sethian

Proceedings of the 2016 IEEE Applied Imagery Pattern Recognition Workshop, 2016

2015

An Out-of-Core Task-based Middleware for Data-Intensive Scientific Computing.

Erik Saule, Hasan Metin Aktulga, Chao Yang, Esmond G. Ng, Ümit V. Çatalyürek

Proceedings of the Handbook on Data Centers, 2015

A Proximal Gradient Method for Ensemble Density Functional Theory.

Michael Ulbrich, Zaiwen Wen, Chao Yang, Dennis Klöckner, Zhaosong Lu

SIAM J. Sci. Comput., 2015

A projected preconditioned conjugate gradient algorithm for computing many extreme eigenpairs of a Hermitian matrix.

Eugene Vecharynski, Chao Yang, John E. Pask

J. Comput. Phys., 2015

Numerical integration for ab initio many-electron self energy calculations within the GW approximation.

Fang Liu, Lin Lin, Derek Vigil-Fowler, Johannes Lischner, Alexander F. Kemper, Sahar Sharifzadeh, Felipe H. da Jornada, Jack Deslippe, Chao Yang, Jeffrey B. Neaton, Steven G. Louie

J. Comput. Phys., 2015

New algorithms for iterative matrix-free eigensolvers in quantum chemistry.

Dmitry Zuev, Eugene Vecharynski, Chao Yang, Natalie Orms, Anna I. Krylov

J. Comput. Chem., 2015

Enhancing the scalability and load balancing of the parallel selected inversion algorithm via tree-based asynchronous communication.

Mathias Jacquelin, Lin Lin, Nathan Wichmann, Chao Yang

CoRR, 2015

2014

Exploring the future of out-of-core computing with compute-local non-volatile memory.

Myoungsoo Jung, Ellis Herbert Wilson III, Wonil Choi, John Shalf, Hasan Metin Aktulga, Chao Yang, Erik Saule, Ümit V. Çatalyürek, Mahmut T. Kandemir

Sci. Program., 2014

Parallel eigenvalue calculation based on multiple shift-invert Lanczos and contour integral based spectral projection method.

Hasan Metin Aktulga, Lin Lin, Christopher Haine, Esmond G. Ng, Chao Yang

Parallel Comput., 2014

Improving the scalability of a symmetric iterative eigensolver for multi-core platforms.

Hasan Metin Aktulga, Chao Yang, Esmond G. Ng, Pieter Maris, James P. Vary

Concurr. Comput. Pract. Exp., 2014

Optimizing Sparse Matrix-Multiple Vectors Multiplication for Nuclear Configuration Interaction Calculations.

Hasan Metin Aktulga, Aydin Buluç, Samuel Williams, Chao Yang

Proceedings of the 2014 IEEE 28th International Parallel and Distributed Processing Symposium, 2014

2013

Elliptic Preconditioner for Accelerating the Self-Consistent Field Iteration in Kohn-Sham Density Functional Theory.

Lin Lin, Chao Yang

SIAM J. Sci. Comput., 2013

2012

An Out-of-Core Dataflow Middleware to Reduce the Cost of Large Scale Iterative Solvers.

Zheng Zhou, Erik Saule, Hasan Metin Aktulga, Chao Yang, Esmond G. Ng, Pieter Maris, James P. Vary, Ümit V. Çatalyürek

Proceedings of the 41st International Conference on Parallel Processing Workshops, 2012

Topology-Aware Mappings for Large-Scale Eigenvalue Problems.

Hasan Metin Aktulga, Chao Yang, Esmond G. Ng, Pieter Maris, James P. Vary

Proceedings of the Euro-Par 2012 Parallel Processing - 18th International Conference, 2012

An Out-of-Core Eigensolver on SSD-equipped Clusters.

Zheng Zhou, Erik Saule, Hasan Metin Aktulga, Chao Yang, Esmond G. Ng, Pieter Maris, James P. Vary, Ümit V. Çatalyürek

Proceedings of the 2012 IEEE International Conference on Cluster Computing, 2012

2011

SelInv - An Algorithm for Selected Inversion of a Sparse Symmetric Matrix.

Lin Lin, Chao Yang, Juan C. Meza, Jianfeng Lu, Lexing Ying, Weinan E

ACM Trans. Math. Softw., 2011

A Fast Parallel Algorithm for Selected Inversion of Structured Sparse Matrices with Application to 2D Electronic Structure Calculations.

Lin Lin, Chao Yang, Jianfeng Lu, Lexing Ying, Weinan E

SIAM J. Sci. Comput., 2011

Advancing Nuclear Physics Through TOPS Solvers and Tools

Esmond G. Ng, Jason Sarich, Stefan M. Wild, Todd S. Munson, Hasan Metin Aktulga, Chao Yang, Pieter Maris, James P. Vary, Nicolas Schunck, M. G. Bertolli, Markus Kortelainen, Witold Nazarewicz, Thomas Papenbrock, M. V. Stoitsov

CoRR, 2011

Large-scale parallel null space calculation for nuclear configuration interaction.

Hasan Metin Aktulga, Chao Yang, Esmond G. Ng, Pieter Maris, James P. Vary

Proceedings of the 2011 International Conference on High Performance Computing & Simulation, 2011

On Reducing I/O Overheads in Large-Scale Invariant Subspace Projections.

Hasan Metin Aktulga, Chao Yang, Ümit V. Çatalyürek, Pieter Maris, James P. Vary, Esmond G. Ng

Proceedings of the Euro-Par 2011: Parallel Processing Workshops - CCPI, CGWS, HeteroPar, HiBB, HPCVirt, HPPC, HPSS, MDGS, ProPer, Resilience, UCHPC, VHPC, Bordeaux, France, August 29, 2011

2010

Scaling of ab-initio nuclear physics calculations on multicore computer architectures.

Pieter Maris, Masha Sosonkina, James P. Vary, Esmond G. Ng, Chao Yang

Proceedings of the International Conference on Computational Science, 2010

High-Performance Three-Dimensional Image Reconstruction for Molecular Structure Determination.

Julianne Chung, Philip Sternberg, Chao Yang

Int. J. High Perform. Comput. Appl., 2010

2009

KSSOLV - a MATLAB toolbox for solving the Kohn-Sham equations.

Chao Yang, Juan C. Meza, Byounghak Lee, Lin-Wang Wang

ACM Trans. Math. Softw., 2009

2008

An Implementation and Evaluation of the AMLS Method for Sparse Eigenvalue Problems.

Weiguo Gao, Xiaoye S. Li, Chao Yang, Zhaojun Bai

ACM Trans. Math. Softw., 2008

On the Convergence of the Self-Consistent Field Iteration for a Class of Nonlinear Eigenvalue Problems.

Chao Yang, Weiguo Gao, Juan C. Meza

SIAM J. Matrix Anal. Appl., 2008

Accelerating configuration interaction calculations for nuclear structure.

Philip Sternberg, Esmond G. Ng, Chao Yang, Pieter Maris, James P. Vary, Masha Sosonkina, Hung Viet Le

Proceedings of the ACM/IEEE Conference on High Performance Computing, 2008

2007

A Trust Region Direct Constrained Minimization Algorithm for the Kohn-Sham Equation.

Chao Yang, Juan C. Meza, Lin-Wang Wang

SIAM J. Sci. Comput., 2007

2006

A constrained optimization algorithm for total energy minimization in electronic structure calculations.

Chao Yang, Juan C. Meza, Lin-Wang Wang

J. Comput. Phys., 2006

2005

An Algebraic Substructuring Method for Large-Scale Eigenvalue Calculation.

Chao Yang, Weiguo Gao, Zhaojun Bai, Xiaoye S. Li, Lie-Quan Lee, Parry Husbands, Esmond G. Ng

SIAM J. Sci. Comput., 2005

2004

Matrix-free constructions of circulant and block circulant preconditioners.

Chao Yang, Esmond G. Ng, Pawel A. Penczek

Numer. Linear Algebra Appl., 2004

Algebraic Sub-structuring for Electromagnetic Applications.

Chao Yang, Weiguo Gao, Zhaojun Bai, Xiaoye S. Li, Lie-Quan Lee, Parry Husbands, Esmond G. Ng

Proceedings of the Applied Parallel Computing, 2004

2003

Time-Memory Trade-Offs Using Sparse Matrix Methods for Large-Scale Eigenvalue Problems.

Keita Teranishi, Padma Raghavan, Chao Yang

Proceedings of the Computational Science and Its Applications, 2003

2002

Large-Scale Normal Coordinate Analysis on Distributed Memory Parallel Systems.

Chao Yang, Padma Raghavan, Lloyd F. Arrowood, Donald W. Noid, Bobby G. Sumpter, Robert E. Tuzun

Int. J. High Perform. Comput. Appl., 2002