Chang Sik Kim

According to our database, Chang Sik Kim authored at least 10 papers between 2007 and 2019.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2019

In silico error correction improves cfDNA mutation calling.

Chang Sik Kim, Sumitra Mohan, Mahmood Ayub, Dominic G. Rothwell, Caroline Dive, Ged Brady, Crispin J. Miller

Bioinform., 2019

2017

K-mer clustering algorithm using a MapReduce framework: application to the parallelization of the Inchworm module of Trinity.

Chang Sik Kim, Martyn D. Winn, Vipin Sachdeva, Kirk E. Jordan

BMC Bioinform., 2017

2016

A gene-signature progression approach to identifying candidate small-molecule cancer therapeutics with connectivity mapping.

Qing Wen, Chang Sik Kim, Peter Hamilton, Shu-Dong Zhang

BMC Bioinform., 2016

2014

Parallelization of the Trinity Pipeline for De Novo Transcriptome Assembly.

Vipin Sachdeva, Chang Sik Kim, Kirk E. Jordan, Martyn D. Winn

Proceedings of the 2014 IEEE International Parallel & Distributed Processing Symposium Workshops, 2014

Integrative analysis of chemo-transcriptomic profiles for drug-feature specific gene expression signatures.

Chang Sik Kim, Qing Wen, Shu-Dong Zhang

Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

K-mer clustering algorithm using a MapReduce approach.

Chang Sik Kim, Martyn D. Winn, Vipin Sachdeva, Kirk E. Jordan

Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

RMA with quantile normalization mixes biological signals between different sample groups in microarray data analysis.

Chang Sik Kim, Seungwoo Hwang, Shu-Dong Zhang

Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

2008

A phase synchronization clustering algorithm for identifying interesting groups of genes from cell cycle expression data.

Chang Sik Kim, Cheol Soo Bae, Hong Joon Tcha

BMC Bioinform., 2008

Detecting biological associations between genes based on the theory of phase synchronization.

Chang Sik Kim, Pentti Riikonen, Tapio Salakoski

Biosyst., 2008

2007

Bayesian Orthogonal Least Squares (BOLS) algorithm for reverse engineering of gene regulatory networks.

Chang Sik Kim

BMC Bioinform., 2007