Cezary Czaplewski
Orcid: 0000-0002-0294-3403
According to our database1,
Cezary Czaplewski
authored at least 24 papers
between 1997 and 2024.
Collaborative distances:
Collaborative distances:
Timeline
Legend:
Book In proceedings Article PhD thesis Dataset OtherLinks
Online presence:
-
on zbmath.org
-
on orcid.org
On csauthors.net:
Bibliography
2024
Assessment of Two Restraint Potentials for Coarse-Grained Chemical-Cross-Link-Assisted Modeling of Protein Structures.
J. Chem. Inf. Model., February, 2024
Multi-GPU UNRES for scalable coarse-grained simulations of very large protein systems.
Comput. Phys. Commun., 2024
2023
Optimization of parallel implementation of UNRES package for coarse-grained simulations to treat large proteins.
J. Comput. Chem., February, 2023
Long-time scale simulations of virus-like particles from three human-norovirus strains.
J. Comput. Chem., 2023
2021
UNRES-Dock - protein-protein and peptide-protein docking by coarse-grained replica-exchange MD simulations.
Bioinform., 2021
2020
Improved Consensus-Fragment Selection in Template-Assisted Prediction of Protein Structures with the UNRES Force Field in CASP13.
J. Chem. Inf. Model., 2020
2018
Supercomput. Front. Innov., 2018
UNRES server for physics-based coarse-grained simulations and prediction of protein structure, dynamics and thermodynamics.
Nucleic Acids Res., 2018
2017
Ergodicity and model quality in template-restrained canonical and temperature/Hamiltonian replica exchange coarse-grained molecular dynamics simulations of proteins.
J. Comput. Chem., 2017
2016
Use of Restraints from Consensus Fragments of Multiple Server Models To Enhance Protein-Structure Prediction Capability of the UNRES Force Field.
J. Chem. Inf. Model., 2016
Performance of protein-structure predictions with the physics-based UNRES force field in CASP11.
Bioinform., 2016
2015
Prediction of Protein Structure by Template-Based Modeling Combined with the UNRES Force Field.
J. Chem. Inf. Model., 2015
2010
Towards Temperature Dependent Coarse-grained Potential of Side-chain Interactions for Protein Folding Simulations.
Proceedings of the 10th IEEE International Conference on Bioinformatics and Bioengineering, 2010
2006
A Hierarchical Multiscale Approach to Protein Structure Prediction: Production of Low-Resolution Packing Arrangements of Helices and Refinement of the Best Models with a United-Residue Force Field.
Multiscale Model. Simul., 2006
Proceedings of the Applied Parallel Computing. State of the Art in Scientific Computing, 2006
2005
Protein structure prediction with the UNRES force-field using Replica-Exchange Monte Carlo-with-Minimization; Comparison with MCM, CSA, and CFMC.
J. Comput. Chem., 2005
J. Comput. Chem., 2005
2002
Evolution of physics-based methodology for exploring the conformational energy landscape of proteins.
J. Comput. Chem., 2002
2000
UNRES: a united-residue force field for energy-based prediction of protein structure - orgin and significance of multibody terms.
Proceedings of the Fourth Annual International Conference on Computational Molecular Biology, 2000
1999
Essential dynamics/factor analysis for the interpretation of molecular dynamics trajectories.
J. Comput. Aided Mol. Des., 1999
1998
United-residue force field for off-lattice protein-structure simulations: III. Origin of backbone hydrogen-bonding cooperativity in united-residue potentials.
J. Comput. Chem., 1998
J. Comput. Aided Mol. Des., 1998
1997
J. Comput. Aided Mol. Des., 1997