César Manuel Vargas Benítez

Orcid: 0000-0002-5691-5432

According to our database1, César Manuel Vargas Benítez authored at least 17 papers between 2007 and 2020.

Collaborative distances:
  • Dijkstra number2 of six.
  • Erdős number3 of five.

Timeline

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Bibliography

2020
PathMolD-AB: Spatiotemporal pathways of protein folding using parallel molecular dynamics with a coarse-grained model.
Comput. Biol. Chem., 2020

A benchmark of optimally folded protein structures using integer programming and the 3D-HP-SC model.
Comput. Biol. Chem., 2020

2018
A Novel Approach to Protein Folding Prediction based on Long Short-Term Memory Networks: A Preliminary Investigation and Analysis.
Proceedings of the 2018 International Joint Conference on Neural Networks, 2018

2017
A deep bidirectional long short-term memory approach applied to the protein secondary structure prediction problem.
Proceedings of the IEEE Latin American Conference on Computational Intelligence, 2017

A gene expression programming approach for evolving multi-class image classifiers.
Proceedings of the IEEE Latin American Conference on Computational Intelligence, 2017

2016
An Ecologically-inspired Parallel Approach Applied to the Protein Structure Reconstruction from Contact Maps.
Proceedings of the Genetic and Evolutionary Computation Conference, 2016

2015
Contributions to the study of the protein folding problem using bioinspired computation and molecular dynamics.
PhD thesis, 2015

2014
Population-based harmony search using GPU applied to protein structure prediction.
Int. J. Comput. Sci. Eng., 2014

Gene Expression Programming for Evolving Two-Dimensional Cellular Automata in a Distributed Environment.
Proceedings of the Intelligent Distributed Computing VIII, 2014

2012
Parallelism, hybridism and coevolution in a multi-level ABC-GA approach for the protein structure prediction problem.
Concurr. Comput. Pract. Exp., 2012

Molecular Dynamics for Simulating the Protein Folding Process Using the 3D AB Off-Lattice Model.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2012

2011
Reconfigurable Hardware Computing for Accelerating Protein Folding Simulations Using the Harmony Search Algorithm and the 3D-HP-Side Chain Model.
Proceedings of the Algorithms and Architectures for Parallel Processing, 2011

2010
Protein structure prediction with the 3D-HP side-chain model using a master-slave parallel genetic algorithm.
J. Braz. Comput. Soc., 2010

Hierarchical Parallel Genetic Algorithm applied to the three-dimensional HP Side-chain Protein Folding Problem.
Proceedings of the IEEE International Conference on Systems, 2010

Parallel Artificial Bee Colony Algorithm Approaches for Protein Structure Prediction Using the 3DHP-SC Model.
Proceedings of the Intelligent Distributed Computing IV - Proceedings of the 4th International Symposium on Intelligent Distributed Computing, 2010

2009
A parallel genetic algorithm for protein folding prediction using the 3D-HP Side Chain model.
Proceedings of the IEEE Congress on Evolutionary Computation, 2009

2007
Simulation of the Dynamic Behavior of One-Dimensional Cellular Automata Using Reconfigurable Computing.
Proceedings of the Reconfigurable Computing: Architectures, 2007


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