Cecilia N. Arighi
Orcid: 0000-0002-0803-4817
According to our database1,
Cecilia N. Arighi
authored at least 61 papers
between 2007 and 2024.
Collaborative distances:
Collaborative distances:
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on orcid.org
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Bibliography
2024
Functional implications of glycans and their curation: insights from the workshop held at the 16th Annual International Biocuration Conference in Padua, Italy.
Database J. Biol. Databases Curation, January, 2024
2023
Bioinform., January, 2023
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023
2022
A roadmap for the functional annotation of protein families: a community perspective.
Database J. Biol. Databases Curation, 2022
Overview of the COVID-19 text mining tool interactive demonstration track in BioCreative VII.
Database J. Biol. Databases Curation, 2022
Proceedings of the AMIA 2022, 2022
2021
UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase.
Bioinform., 2021
Bioinform., 2021
Corrigendum to: Utilizing image and caption information for biomedical document classification.
Bioinform., 2021
Database J. Biol. Databases Curation, 2021
Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research.
Briefings Bioinform., 2021
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021
2020
Database J. Biol. Databases Curation, 2020
Modality-Classification of Microscopy Images Using Shallow Variants of Deep Networks.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020
2019
An effective biomedical document classification scheme in support of biocuration: addressing class imbalance.
Database J. Biol. Databases Curation, 2019
Database J. Biol. Databases Curation, 2019
2018
iPTMnet: an integrated resource for protein post-translational modification network discovery.
Nucleic Acids Res., 2018
iTextMine: integrated text-mining system for large-scale knowledge extraction from the literature.
Database J. Biol. Databases Curation, 2018
2017
Protein Ontology (PRO): enhancing and scaling up the representation of protein entities.
Nucleic Acids Res., 2017
Bioinform., 2017
eGenPub, a text mining system for extending computationally mapped bibliography for UniProt Knowledgebase by capturing centrality.
Database J. Biol. Databases Curation, 2017
2016
Database J. Biol. Databases Curation, 2016
Pressing needs of biomedical text mining in biocuration and beyond: opportunities and challenges.
Database J. Biol. Databases Curation, 2016
BioC-compatible full-text passage detection for protein-protein interactions using extended dependency graph.
Database J. Biol. Databases Curation, 2016
BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID.
Database J. Biol. Databases Curation, 2016
Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016
2015
RLIMS-P 2.0: A Generalizable Rule-Based Information Extraction System for Literature Mining of Protein Phosphorylation Information.
IEEE ACM Trans. Comput. Biol. Bioinform., 2015
PLoS Comput. Biol., 2015
Construction of phosphorylation interaction networks by text mining of full-length articles using the eFIP system.
Database J. Biol. Databases Curation, 2015
2014
Nucleic Acids Res., 2014
RLIMS-P: an online text-mining tool for literature-based extraction of protein phosphorylation information.
Database J. Biol. Databases Curation, 2014
Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data.
Database J. Biol. Databases Curation, 2014
Database J. Biol. Databases Curation, 2014
Database J. Biol. Databases Curation, 2014
Knowledge Representation of Protein PTMs and Complexes in the Protein Ontology: Application to Multi-Faceted Disease Analysis.
Proceedings of the 5th International Conference on Biomedical Ontology, 2014
2013
A framework for biomedical figure segmentation towards image-based document retrieval.
BMC Syst. Biol., 2013
Construction of protein phosphorylation networks by data mining, text mining and ontology integration: analysis of the spindle checkpoint.
Database J. Biol. Databases Curation, 2013
An overview of the BioCreative 2012 Workshop Track III: interactive text mining task.
Database J. Biol. Databases Curation, 2013
Text Mining of Protein Phosphorylation Information Using a Generalizable Rule-Based Approach.
Proceedings of the ACM Conference on Bioinformatics, 2013
An Image-Text Approach for Extracting Experimental Evidence of Protein-Protein Interactions in the Biomedical Literature.
Proceedings of the ACM Conference on Bioinformatics, 2013
2012
Community annotation and bioinformatics workforce development in concert - Little Skate Genome Annotation Workshops and Jamborees.
Database J. Biol. Databases Curation, 2012
The eFIP system for text mining of protein interaction networks of phosphorylated proteins.
Database J. Biol. Databases Curation, 2012
Recent advances in biocuration: Meeting Report from the fifth International Biocuration Conference.
Database J. Biol. Databases Curation, 2012
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine, 2012
2011
Nucleic Acids Res., 2011
BMC Bioinform., 2011
Protein-Centric Connection of Biomedical Knowledge: Protein Ontology (PRO) Research and Annotation Tools.
Proceedings of the 2nd International Conference on Biomedical Ontology, 2011
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2011
2009
An improved ontological representation of dendritic cells as a paradigm for all cell types.
BMC Bioinform., 2009
2008
Functional Annotation of Protein Isoforms and Modified Forms.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2008
2007