Carol Friedman

According to our database1, Carol Friedman authored at least 144 papers between 1982 and 2019.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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On csauthors.net:

Bibliography

2019
A two-site survey of medical center personnel's willingness to share clinical data for research: implications for reproducible health NLP research.
BMC Medical Informatics Decis. Mak., 2019

Ensembles of natural language processing systems for portable phenotyping solutions.
J. Biomed. Informatics, 2019

Crowdsourcing Public Opinion for Sharing Medical Records for the Advancement of Science.
Proceedings of the MEDINFO 2019: Health and Wellbeing e-Networks for All, 2019

2018
Detection of drug-drug interactions through data mining studies using clinical sources, scientific literature and social media.
Briefings Bioinform., 2018

Validation of the Behavior of a Knowledge Base Implementing Clinical Guidelines for Point-of-Care Antiretroviral Toxicity Monitoring.
Proceedings of the AMIA 2018, 2018

2017
Monitoring prescribing patterns using regression and electronic health records.
BMC Medical Informatics Decis. Mak., 2017

Toward multimodal signal detection of adverse drug reactions.
J. Biomed. Informatics, 2017

<i>JASIST</i> special issue on biomedical information retrieval.
J. Assoc. Inf. Sci. Technol., 2017

Automated Metabolic Phenotyping of Cytochrome Polymorphisms Using PubMed Abstract Mining.
Proceedings of the AMIA 2017, 2017

2016
An Automated System for Retrieving Herb-drug Interaction Related Articles from MEDLINE.
Proceedings of the Summit on Clinical Research Informatics, 2016

Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed.
Proceedings of the Summit on Clinical Research Informatics, 2016

2015
Validating drug repurposing signals using electronic health records: a case study of metformin associated with reduced cancer mortality.
J. Am. Medical Informatics Assoc., 2015

Medication-indication knowledge bases: a systematic review and critical appraisal.
J. Am. Medical Informatics Assoc., 2015

MAC Annotator: An interactive tool for translating medication appropriateness criteria into structured form.
Proceedings of the AMIA 2015, 2015

Representation of Genetic Variants in Genomic Sequencing Reports.
Proceedings of the AMIA 2015, 2015

Implementing automated delivery of evidence-based medication safety information to the point of care.
Proceedings of the AMIA 2015, 2015

2014
A method for controlling complex confounding effects in the detection of adverse drug reactions using electronic health records.
J. Am. Medical Informatics Assoc., 2014

Developing a Formal Representation for Medication Appropriateness Criteria.
Proceedings of the AMIA 2014, 2014

Combining Heterogeneous Databases to Detect Adverse Drug Reaction.
Proceedings of the AMIA 2014, 2014

Identification of Inflammatory Bowel Disease Patients with Steroid-induced Diabetes Mellitus Using an Electronic Health Record.
Proceedings of the AMIA 2014, 2014

2013
Natural language processing: State of the art and prospects for significant progress, a workshop sponsored by the National Library of Medicine.
J. Biomed. Informatics, 2013

Combing signals from spontaneous reports and electronic health records for detection of adverse drug reactions.
J. Am. Medical Informatics Assoc., 2013

Deriving comorbidities from medical records using Natural Language Processing.
Proceedings of the AMIA 2013, 2013

HospSum: Integrating physician discharge notes with coded nursing care data to generate patient-centric summaries.
Proceedings of the AMIA 2013, 2013

2012
A new clustering method for detecting rare senses of abbreviations in clinical notes.
J. Biomed. Informatics, 2012

Drug-drug interaction through molecular structure similarity analysis.
J. Am. Medical Informatics Assoc., 2012

Combining Corpus-derived Sense Profiles with Estimated Frequency Information to Disambiguate Clinical Abbreviations.
Proceedings of the AMIA 2012, 2012

Electronic health record data suggests metformin improves cancer survival: A new model for drug repurposing studies.
Proceedings of the AMIA 2012, 2012

Identifying overuse of medications using natural language processing and electronic health records.
Proceedings of the AMIA 2012, 2012

Methods for Identifying Suicide or Suicidal Ideation in EHRs.
Proceedings of the AMIA 2012, 2012

2011
Deriving a probabilistic syntacto-semantic grammar for biomedicine based on domain-specific terminologies.
J. Biomed. Informatics, 2011

Facilitating adverse drug event detection in pharmacovigilance databases using molecular structure similarity: application to rhabdomyolysis.
J. Am. Medical Informatics Assoc., 2011

2010
Selecting information in electronic health records for knowledge acquisition.
J. Biomed. Informatics, 2010

Mining multi-item drug adverse effect associations in spontaneous reporting systems.
BMC Bioinform., 2010

Mining electronic health records for adverse drug effects using regression based methods.
Proceedings of the ACM International Health Informatics Symposium, 2010

2009
Research Paper: Methods for Building Sense Inventories of Abbreviations in Clinical Notes.
J. Am. Medical Informatics Assoc., 2009

Research Paper: Active Computerized Pharmacovigilance Using Natural Language Processing, Statistics, and Electronic Health Records: A Feasibility Study.
J. Am. Medical Informatics Assoc., 2009

Research Paper: Syndromic Surveillance Using Ambulatory Electronic Health Records.
J. Am. Medical Informatics Assoc., 2009

Characterizing environmental and phenotypic associations using information theory and electronic health records.
BMC Bioinform., 2009

PhenoGO: an integrated resource for the multiscale mining of clinical and biological data.
BMC Bioinform., 2009

Generating quality word sense disambiguation test sets based on MeSH indexing.
Proceedings of the AMIA 2009, 2009

Discovering Novel Adverse Drug Events Using Natural Language Processing and Mining of the Electronic Health Record.
Proceedings of the Artificial Intelligence in Medicine, 2009

2008
Research Paper: Automated Acquisition of Disease-Drug Knowledge from Biomedical and Clinical Documents: An Initial Study.
J. Am. Medical Informatics Assoc., 2008

Semantic reclassification of the UMLS concepts.
Bioinform., 2008

Methods for Building Sense Inventories of Abbreviations in Clinical Notes.
Proceedings of the AMIA 2008, 2008

Automated Knowledge Acquisition from Clinical Narrative Reports.
Proceedings of the AMIA 2008, 2008

Comparing ICD9-Encoded Diagnoses and NLP-Processed Discharge Summaries for Clinical Trials Pre-Screening: A Case Study.
Proceedings of the AMIA 2008, 2008

Word Sense Disambiguation via Semantic Type Classification.
Proceedings of the AMIA 2008, 2008

2007
Natural language processing and visualization in the molecular imaging domain.
J. Biomed. Informatics, 2007

Research Paper: Semantic Classification of Biomedical Concepts Using Distributional Similarity.
J. Am. Medical Informatics Assoc., 2007

Using contextual and lexical features to restructure and validate the classification of biomedical concepts.
BMC Bioinform., 2007

Gene symbol disambiguation using knowledge-based profiles.
Bioinform., 2007

Discovery of Protein Interaction Networks Shared by Diseases.
Proceedings of the Biocomputing 2007, 2007

Using Distributional Analysis to Semantically Classify UMLS Concepts.
Proceedings of the MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics, 2007

Information theory applied to the sparse gene ontology annotation network to predict novel gene function.
Proceedings of the Proceedings 15th International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), 2007

Combining multiple evidence for gene symbol disambiguation.
Proceedings of the Biological, translational, and clinical language processing, 2007

A Study of Abbreviations in Clinical Notes.
Proceedings of the AMIA 2007, 2007

Information-Theoretic Classification of SNOMED Improves the Organization of Context-Sensitive Excerpts from Cochrane Reviews.
Proceedings of the AMIA 2007, 2007

Combining Contextual and Lexical Features to Classify UMLS Concepts.
Proceedings of the AMIA 2007, 2007

Detection of Practice Pattern Trends through Natural Language Processing of Clinical Narratives and Biomedical Literature.
Proceedings of the AMIA 2007, 2007

2006
Terminology model discovery using natural language processing and visualization techniques.
J. Biomed. Informatics, 2006

Research Paper: Quantitative Assessment of Dictionary-based Protein Named Entity Tagging.
J. Am. Medical Informatics Assoc., 2006

Research Paper: Human and Automated Coding of Rehabilitation Discharge Summaries According to the International Classification of Functioning, Disability, and Health.
J. Am. Medical Informatics Assoc., 2006

Qualitative assessment of the International Classification of Functioning, Disability, and Health with respect to the desiderata for controlled medical vocabularies.
Int. J. Medical Informatics, 2006

Machine learning and word sense disambiguation in the biomedical domain: design and evaluation issues.
BMC Bioinform., 2006

Bio-Ontology and text: bridging the modeling gap.
Bioinform., 2006

PhenoGO: Assigning Phenotypic Context to Gene Ontology Annotations with Natural Language Processing.
Proceedings of the Biocomputing 2006, 2006

Issues in Representing Biological and Clinical Phenotypes Using the Formal Models.
Proceedings of the KR-MED 2006, 2006

A Natural Language Processing (NLP) Tool to Assist in the Curation Of the Laboratory Mouse Tumor Biology Database.
Proceedings of the AMIA 2006, 2006

ZebraHunter: Searching Rare Medical Diagnoses and Retrieving Relevant Citations.
Proceedings of the AMIA 2006, 2006

Exploiting Semantic Relations for Literature-Based Discovery.
Proceedings of the AMIA 2006, 2006

Disseminating Natural Language Processed Clinical Narratives.
Proceedings of the AMIA 2006, 2006

Generating Executable Knowledge for Evidence-Based Medicine Using Natural Language and Semantic Processing.
Proceedings of the AMIA 2006, 2006

2005
Extracting information on pneumonia in infants using natural language processing of radiology reports.
J. Biomed. Informatics, 2005

ISO reference terminology models for nursing: Applicability for natural language processing of nursing narratives.
Int. J. Medical Informatics, 2005

Visualizing information across multidimensional post-genomic structured and textual databases.
Bioinform., 2005

Gene name ambiguity of eukaryotic nomenclatures.
Bioinform., 2005

System Architecture for Temporal Information Extraction, Representationand Reasoning in Clinical Narrative Reports.
Proceedings of the AMIA 2005, 2005

Natural Language Processing in the Molecular Imaging Domain.
Proceedings of the AMIA 2005, 2005

Extending a Medical Language Processing System to the Functional Status Domain.
Proceedings of the AMIA 2005, 2005

2004
Introduction: named entity recognition in biomedicine.
J. Biomed. Informatics, 2004

Research Paper: A Multi-aspect Comparison Study of Supervised Word Sense Disambiguation.
J. Am. Medical Informatics Assoc., 2004

Research Paper: Automated Encoding of Clinical Documents Based on Natural Language Processing.
J. Am. Medical Informatics Assoc., 2004

Probabilistic inference of molecular networks from noisy data sources.
Bioinform., 2004

Biological Nomenclatures: A Source of Lexical Knowledge and Ambiguity.
Proceedings of the Biocomputing 2004, 2004

Facilitating Cancer Research using Natural Language Processing of Pathology Reports.
Proceedings of the MEDINFO 2004, 2004

CliniViewer: A Tool for Viewing Electronic Medical Records Based on Natural Language Processing and XML.
Proceedings of the MEDINFO 2004, 2004

Extracting Phenotypic Information from the Literature via Natural Language Processing.
Proceedings of the MEDINFO 2004, 2004

A Comparison of Semantic Categories of the ISO Reference Terminology Models for Nursing and the MedLEE Natural Language Processing System.
Proceedings of the MEDINFO 2004, 2004

2003
A vocabulary development and visualization tool based on natural language processing and the mining of textual patient reports.
J. Biomed. Informatics, 2003

Mining Terminological Knowledge in Large Biomedical Corpora.
Proceedings of the 8th Pacific Symposium on Biocomputing, 2003

Linking Biomedical Language, Information and Knowledge - Session Introduction.
Proceedings of the 8th Pacific Symposium on Biocomputing, 2003

Facilitating Research in Pathology using Natural Language Processing.
Proceedings of the AMIA 2003, 2003

A Native XML Database Design for Clinical Document Research.
Proceedings of the AMIA 2003, 2003

Natural Language Processing Challenges in HIV/AIDS Clinic Notes.
Proceedings of the AMIA 2003, 2003

2002
Two biomedical sublanguages: a description based on the theories of Zellig Harris.
J. Biomed. Informatics, 2002

Editorial.
J. Biomed. Informatics, 2002

Research Paper: Mapping Abbreviations to Full Forms in Biomedical Articles.
J. Am. Medical Informatics Assoc., 2002

Research Paper: Automatic Resolution of Ambiguous Terms Based on Machine Learning and Conceptual Relations in the UMLS.
J. Am. Medical Informatics Assoc., 2002

Of truth and pathways: chasing bits of information through myriads of articles.
Proceedings of the Tenth International Conference on Intelligent Systems for Molecular Biology, 2002

Automatic extraction of gene and protein synonyms from MEDLINE and journal articles.
Proceedings of the AMIA 2002, 2002

A study of abbreviations in MEDLINE abstracts.
Proceedings of the AMIA 2002, 2002

Representing nested semantic information in a linear string of text using XML.
Proceedings of the AMIA 2002, 2002

A comparison of the Charlson comorbidities derived from medical language processing and administrative data.
Proceedings of the AMIA 2002, 2002

2001
Disambiguating Ambiguous Biomedical Terms in Biomedical Narrative Text: An Unsupervised Method.
J. Biomed. Informatics, 2001

Extraction of Information from Emergency Medical Services Incident Narratives.
Proceedings of the MEDINFO 2001, 2001

PERSIVAL, a system for personalized search and summarization over multimedia healthcare information.
Proceedings of the ACM/IEEE Joint Conference on Digital Libraries, 2001

GENIES: a natural-language processing system for the extraction of molecular pathways from journal articles.
Proceedings of the Ninth International Conference on Intelligent Systems for Molecular Biology, 2001

GeneWays: A System for Mining Text and for Integrating Data on Molecular Pathways.
Proceedings of the Computer science and biology: Proceedings of the German Conference on Bioinformatics, 2001

Automating SNOMED coding using medical language understanding: a feasibility study.
Proceedings of the AMIA 2001, 2001

A study of abbreviations in the UMLS.
Proceedings of the AMIA 2001, 2001

Linking Protein Interaction Data to the MESH Hierarchy.
Proceedings of the AMIA 2001, 2001

Evaluating the UMLS as a source of lexical knowledge for medical language processing.
Proceedings of the AMIA 2001, 2001

2000
Coding Neuroradiology Reports for the Northern Manhattan Stroke Study: A Comparison of Natural Language Processing and Manual Review.
Comput. Biomed. Res., 2000

A knowledge model for analysis and simulation of regulatory networks.
Bioinform., 2000

Knowledge-driven Highlighting of Clinical Texts: Does it Help or Distract?
Proceedings of the AMIA 2000, 2000

Automating ICD-9-CM Encoding Using Medical Language Processing: A Feasibility Study.
Proceedings of the AMIA 2000, 2000

A method for vocabulary development and visualization based on medical language processing and XML.
Proceedings of the AMIA 2000, 2000

Using BLAST, A DNA and Protein Sequence Comparison Tool, for Finding Gene and Protein Names in Journal Articles.
Proceedings of the AMIA 2000, 2000

A broad-coverage natural language processing system.
Proceedings of the AMIA 2000, 2000

Limited parsing of notational text visit notes: ad-hoc vs. NLP approaches.
Proceedings of the AMIA 2000, 2000

1999
Research Paper: A Reliability Study for Evaluating Information Extraction from Radiology Reports.
J. Am. Medical Informatics Assoc., 1999

Research Paper: Representing Information in Patient Reports Using Natural Language Processing and the Extensible Markup Language.
J. Am. Medical Informatics Assoc., 1999

Representing genomic knowledge in the UMLS semantic network.
Proceedings of the AMIA 1999, 1999

What do ER physicians really want? A method for elucidating ER information needs.
Proceedings of the AMIA 1999, 1999

A Knowledge Model for Analysis and Simulation of Regulatory Based on Information in Electronic Publications.
Proceedings of the AMIA 1999, 1999

Automating a severity score guideline for community-acquired pneumonia employing medical language processing of discharge summaries.
Proceedings of the AMIA 1999, 1999

1998
Natural Language as a Tool in the Development of a Controlled Vocabulary.
Proceedings of the AMIA 1998, 1998

Continuous-Speech Structured Reporting.
Proceedings of the AMIA 1998, 1998

An evaluation of natural language processing methodologies.
Proceedings of the AMIA 1998, 1998

1997
Identification of findings suspicious for breast cancer based on natural language processing of mammogram reports.
Proceedings of the AMIA 1997, 1997

Towards a comprehensive medical language processing system: methods and issues.
Proceedings of the AMIA 1997, 1997

1995
Natural language processing in an operational clinical information system.
Nat. Lang. Eng., 1995

Research Paper: The Canon Group's Effort: Working Toward a Merged Model.
J. Am. Medical Informatics Assoc., 1995

Two Applications of Statistical Modelling to Natural Language Processing.
Proceedings of the Learning from Data, 1995

1994
Research Paper: A Schema for Representing Medical Language Applied to Clinical Radiology.
J. Am. Medical Informatics Assoc., 1994

Research Paper: A General Natural-language Text Processor for Clinical Radiology.
J. Am. Medical Informatics Assoc., 1994

1989
A computational treatment of the comparative.
PhD thesis, 1989

A General Computational Treatment of the Comparative.
Proceedings of the 27th Annual Meeting of the Association for Computational Linguistics, 1989

1985
Transporting the Linguistic String Project System from a Medical to a Navy Domain.
ACM Trans. Inf. Syst., 1985

Modeling Natural Language Data for Automatic Creation of a Database from Free-Text Input.
IEEE Database Eng. Bull., 1985

Processing Free-Text Input to Obtain a Database of Medical Information.
Proceedings of the 8th annual international ACM SIGIR conference on Research and development in information retrieval, 1985

1983
Isolating Domain Dependencies In Natural Language Interfaces.
Proceedings of the 1st Applied Natural Language Processing Conference, 1983

1982
Natural Language Interfaces Using Limited Semantic Information.
Proceedings of the 9th International Conference on Computational Linguistics, 1982


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