Carl J. Schmidt

According to our database, Carl J. Schmidt authored at least 18 papers between 2001 and 2018.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2018

TransAtlasDB: an integrated database connecting expression data, metadata and variants.

Modupeore O. Adetunji, Susan J. Lamont, Carl J. Schmidt

Database J. Biol. Databases Curation, 2018

2017

Graph query algebra and visual proximity rules for biological pathway exploration.

Keqin Wu, Liang Sun, Carl J. Schmidt, Jian Chen

Inf. Vis., 2017

WebGIVI: a web-based gene enrichment analysis and visualization tool.

Liang Sun, Yongnan Zhu, A. S. M. Ashique Mahmood, Catalina O. Tudor, Jia Ren, K. Vijay-Shanker, Jian Chen, Carl J. Schmidt

BMC Bioinform., 2017

2016

miRiaD: A Text Mining Tool for Detecting Associations of microRNAs with Diseases.

Samir Gupta, Karen E. Ross, Catalina O. Tudor, Cathy H. Wu, Carl J. Schmidt, K. Vijay-Shanker

J. Biomed. Semant., 2016

2015

PathRings: a web-based tool for exploration of ortholog and expression data in biological pathways.

Yongnan Zhu, Liang Sun, Alexander Garbarino, Carl J. Schmidt, Jinglong Fang, Jian Chen

BMC Bioinform., 2015

2012

Developing a biocuration workflow for AgBase, a non-model organism database.

Lakshmi R. Pillai, Philippe Chouvarine, Catalina O. Tudor, Carl J. Schmidt, K. Vijay-Shanker, Fiona M. McCarthy

Database J. Biol. Databases Curation, 2012

Pathway curation: Application of text-mining tools eGIFT and RLIMS-P.

Carl J. Schmidt, Liang Sun, Cecilia N. Arighi, Keith Decker, K. Vijay-Shanker, Manabu Torii, Catalina O. Tudor, Cathy H. Wu, Peter D'Eustachio

Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

Using expression data to help pathway curation.

Keith Decker, Preeti Anday, Liang Sun, Carl J. Schmidt

Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

2010

eGIFT: Mining Gene Information from the Literature.

Catalina O. Tudor, Carl J. Schmidt, K. Vijay-Shanker

BMC Bioinform., 2010

2009

BioPlanner: A Plan Adaptation Approach for the Discovery of Biological Pathways across Species.

Li Jin, Keith S. Decker, Carl J. Schmidt

Proceedings of the Twenty-First Conference on Innovative Applications of Artificial Intelligence, 2009

2008

<i>Gallus</i> GBrowse: a unified genomic database for the chicken.

Carl J. Schmidt, Michael Romanov, Oliver Ryder, Vincent J. Magrini, Matthew T. Hickenbotham, Jarret Glasscock, Sean McGrath, Elaine R. Mardis, Lincoln D. Stein

Nucleic Acids Res., 2008

Mining the Biomedical Literature for Genic Information.

Catalina O. Tudor, K. Vijay-Shanker, Carl J. Schmidt

Proceedings of the Workshop on Current Trends in Biomedical Natural Language Processing, 2008

2003

GoFigure: Automated Gene OntologyTM annotation.

Salim Khan, Gang Situ, Keith Decker, Carl J. Schmidt

Bioinform., 2003

A multi-agent system for the quantitative simulation of biological networks.

Salim Khan, Ravi Makkena, Foster McGeary, Keith S. Decker, William Gillis, Carl J. Schmidt

Proceedings of the Second International Joint Conference on Autonomous Agents & Multiagent Systems, 2003

A Multi-Agent System-driven AI Planning Approach to Biological Pathway Discovery.

Salim Khan, William Gillis, Carl J. Schmidt, Keith Decker

Proceedings of the Thirteenth International Conference on Automated Planning and Scheduling (ICAPS 2003), 2003

2002

BioMAS: A Multi-Agent System for Genomic Annotation.

Keith Decker, Salim Khan, Carl J. Schmidt, Gang Situ, Ravi Makkena, Dennis Michaud

Int. J. Cooperative Inf. Syst., 2002

2001

Extending a Multi-agent System for Genomic Annotation.

Keith Decker, Salim Khan, Carl J. Schmidt, Dennis Michaud

Proceedings of the Cooperative Information Agents V, 5th International Workshop, 2001

A multi-agent system for automated genomic annotation.

Keith Decker, Xiaojing Zheng, Carl J. Schmidt

Proceedings of the Fifth International Conference on Autonomous Agents, 2001