Camilo Thorne

According to our database, Camilo Thorne authored at least 46 papers between 2007 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Focused Contrastive Loss for Classification With Pre-Trained Language Models.

Jiayuan He, Yuan Li, Zenan Zhai, Biaoyan Fang, Camilo Thorne, Christian Druckenbrodt, Saber A. Akhondi, Karin Verspoor

IEEE Trans. Knowl. Data Eng., July, 2024

Elsevier Arena: Human Evaluation of Chemistry/Biology/Health Foundational Large Language Models.

Camilo Thorne, Christian Druckenbrodt, Kinga Szarkowska, Deepika Goyal, Pranita Marajan, Vijay Somanath, Corey Harper, Mao Yan, Tony Scerri

CoRR, 2024

Automated Synonym Discovery for Taxonomy Maintenance Using Semantic Search Techniques.

Maziar Moradi Fard, Camilo Thorne, Paula Sorrolla Bayod, Saber A. Akhondi, Wytze Vlietstra

Proceedings of the Natural Language Processing and Information Systems, 2024

Learning Section Weights for Multi-label Document Classification.

Maziar Moradi Fard, Paula Sorrolla Bayod, Kiomars Motarjem, Mohammad Alian Nejadi, Saber A. Akhondi, Camilo Thorne

Proceedings of the Natural Language Processing and Information Systems, 2024

2023

One Strike, You're Out: Detecting Markush Structures in Low Signal-to-Noise Ratio Images.

Thomas Jurriaans, Kinga Szarkowska, Eric T. Nalisnick, Markus Schwörer, Camilo Thorne, Saber A. Akhondi

CoRR, 2023

Stress Testing BERT Anaphora Resolution Models for Reaction Extraction in Chemical Patents.

Chieling Yueh, Evangelos Kanoulas, Bruno Martins, Camilo Thorne, Saber A. Akhondi

CoRR, 2023

2022

The ChEMU 2022 Evaluation Campaign: Information Extraction in Chemical Patents.

Yuan Li, Biaoyan Fang, Jiayuan He, Hiyori Yoshikawa, Saber A. Akhondi, Christian Druckenbrodt, Camilo Thorne, Zenan Zhai, Zubair Afzal, Trevor Cohn, Timothy Baldwin, Karin Verspoor

Proceedings of the Advances in Information Retrieval, 2022

Overview of ChEMU 2022 Evaluation Campaign: Information Extraction in Chemical Patents.

Yuan Li, Biaoyan Fang, Jiayuan He, Hiyori Yoshikawa, Saber A. Akhondi, Christian Druckenbrodt, Camilo Thorne, Zubair Afzal, Zenan Zhai, Timothy Baldwin, Karin Verspoor

Proceedings of the Experimental IR Meets Multilinguality, Multimodality, and Interaction, 2022

Extended Overview of ChEMU 2022 Evaluation Campaign: Information Extraction in Chemical Patents.

Yuan Li, Biaoyan Fang, Jiayuan He, Hiyori Yoshikawa, Saber A. Akhondi, Christian Druckenbrodt, Camilo Thorne, Zubair Afzal, Zenan Zhai, Kojiro Machi, Masaharu Yoshioka, Youngrok Jang, Hosung Song, Junho Lee, Gyeonghun Kim, Yireun Kim, Stanley Jungkyu Choi, Honglak Lee, Kyunghoon Bae, Darshini Mahendran, Christina Tang, Bridget T. McInnes, Timothy Baldwin, Karin Verspoor

Proceedings of the Working Notes of CLEF 2022 - Conference and Labs of the Evaluation Forum, Bologna, Italy, September 5th - to, 2022

2021

ChemTables: a dataset for semantic classification on tables in chemical patents.

Zenan Zhai, Christian Druckenbrodt, Camilo Thorne, Saber A. Akhondi, Dat Quoc Nguyen, Trevor Cohn, Karin Verspoor

J. Cheminformatics, 2021

ChEMU 2020: Natural Language Processing Methods Are Effective for Information Extraction From Chemical Patents.

Jiayuan He, Dat Quoc Nguyen, Saber A. Akhondi, Christian Druckenbrodt, Camilo Thorne, Ralph Hoessel, Zubair Afzal, Zenan Zhai, Biaoyan Fang, Hiyori Yoshikawa, Ameer Albahem, Lawrence Cavedon, Trevor Cohn, Timothy Baldwin, Karin Verspoor

Frontiers Res. Metrics Anal., 2021

ChEMU 2021: Reaction Reference Resolution and Anaphora Resolution in Chemical Patents.

Jiayuan He, Biaoyan Fang, Hiyori Yoshikawa, Yuan Li, Saber A. Akhondi, Christian Druckenbrodt, Camilo Thorne, Zubair Afzal, Zenan Zhai, Lawrence Cavedon, Trevor Cohn, Timothy Baldwin, Karin Verspoor

Proceedings of the Advances in Information Retrieval, 2021

Overview of ChEMU 2021: Reaction Reference Resolution and Anaphora Resolution in Chemical Patents.

Yuan Li, Biaoyan Fang, Jiayuan He, Hiyori Yoshikawa, Saber A. Akhondi, Christian Druckenbrodt, Camilo Thorne, Zubair Afzal, Zenan Zhai, Timothy Baldwin, Karin Verspoor

Proceedings of the Experimental IR Meets Multilinguality, Multimodality, and Interaction, 2021

Extended Overview of ChEMU 2021: Reaction Reference Resolution and Anaphora Resolution in Chemical Patents.

Yuan Li, Biaoyan Fang, Jiayuan He, Hiyori Yoshikawa, Saber A. Akhondi, Christian Druckenbrodt, Camilo Thorne, Zubair Afzal, Zenan Zhai, Timothy Baldwin, Karin Verspoor

Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to, 2021

Stress Test Evaluation of Biomedical Word Embeddings.

Vladimir Araujo, Andrés Carvallo, Carlos Aspillaga, Camilo Thorne, Denis Parra

Proceedings of the 20th Workshop on Biomedical Language Processing, 2021

2020

Word Embeddings for Chemical Patent Natural Language Processing.

Camilo Thorne, Saber A. Akhondi

CoRR, 2020

Disease Normalization with Graph Embeddings.

Dhruba Pujary, Camilo Thorne, Wilker Aziz

Proceedings of the Intelligent Systems and Applications, 2020

ChEMU: Named Entity Recognition and Event Extraction of Chemical Reactions from Patents.

Dat Quoc Nguyen, Zenan Zhai, Hiyori Yoshikawa, Biaoyan Fang, Christian Druckenbrodt, Camilo Thorne, Ralph Hoessel, Saber A. Akhondi, Trevor Cohn, Timothy Baldwin, Karin Verspoor

Proceedings of the Advances in Information Retrieval, 2020

An Extended Overview of the CLEF 2020 ChEMU Lab: Information Extraction of Chemical Reactions from Patents.

Jiayuan He, Dat Quoc Nguyen, Saber A. Akhondi, Christian Druckenbrodt, Camilo Thorne, Ralph Hoessel, Zubair Afzal, Zenan Zhai, Biaoyan Fang, Hiyori Yoshikawa, Ameer Albahem, Jingqi Wang, Yuankai Ren, Zhi Zhang, Yaoyun Zhang, Mai Hoang Dao, Pedro Ruas, Andre Lamurias, Francisco M. Couto, Jenny Copara, Nona Naderi, Julien Knafou, Patrick Ruch, Douglas Teodoro, Daniel M. Lowe, John Mayfield, Abdullatif Köksal, Hilal Dönmez, Elif Özkirimli, Arzucan Özgür, Darshini Mahendran, Gabrielle Gurdin, Nastassja Lewinski, Christina Tang, Bridget T. McInnes, C. S. Malarkodi, Pattabhi Rk Rao, Sobha Lalitha Devi, Lawrence Cavedon, Trevor Cohn, Timothy Baldwin, Karin Verspoor

Proceedings of the Working Notes of CLEF 2020, 2020

Overview of ChEMU 2020: Named Entity Recognition and Event Extraction of Chemical Reactions from Patents.

Jiayuan He, Dat Quoc Nguyen, Saber A. Akhondi, Christian Druckenbrodt, Camilo Thorne, Ralph Hoessel, Zubair Afzal, Zenan Zhai, Biaoyan Fang, Hiyori Yoshikawa, Ameer Albahem, Lawrence Cavedon, Trevor Cohn, Timothy Baldwin, Karin Verspoor

Proceedings of the Experimental IR Meets Multilinguality, Multimodality, and Interaction, 2020

2019

Improving Chemical Named Entity Recognition in Patents with Contextualized Word Embeddings.

Zenan Zhai, Dat Quoc Nguyen, Saber A. Akhondi, Camilo Thorne, Christian Druckenbrodt, Trevor Cohn, Michelle Gregory, Karin Verspoor

Proceedings of the 18th BioNLP Workshop and Shared Task, 2019

Detecting Chemical Reactions in Patents.

Hiyori Yoshikawa, Dat Quoc Nguyen, Zenan Zhai, Christian Druckenbrodt, Camilo Thorne, Saber A. Akhondi, Timothy Baldwin, Karin Verspoor

Proceedings of the The 17th Annual Workshop of the Australasian Language Technology Association, 2019

2018

On the Semantic Similarity of Disease Mentions in MEDLINE and Twitter.

Camilo Thorne, Roman Klinger

Proceedings of the Natural Language Processing and Information Systems, 2018

2017

Chatbots for troubleshooting: A survey.

Camilo Thorne

Lang. Linguistics Compass, 2017

Multi-Attribute Decision Making with Weighted Description Logics.

Erman Acar, Manuel Fink, Christian Meilicke, Camilo Thorne, Heiner Stuckenschmidt

FLAP, 2017

Towards Confidence Estimation for Typed Protein-Protein Relation Extraction.

Camilo Thorne, Roman Klinger

Proceedings of the Biomedical NLP Workshop associated with RANLP 2017, Varna, 2017

2016

Conditional Random Fields for Spanish Named Entity Recognition Using Unsupervised Features.

Jenny Copara, José Ochoa, Camilo Thorne, Goran Glavas

Proceedings of the Advances in Artificial Intelligence - IBERAMIA 2016, 2016

Cross-Evaluation of Entity Linking and Disambiguation Systems for Clinical Text Annotation.

Camilo Thorne, Stefano Faralli, Heiner Stuckenschmidt

Proceedings of the 12th International Conference on Semantic Systems, 2016

Exploring Unsupervised Features in Conditional Random Fields for Spanish Named Entity Recognition.

Jenny Copara, José Ochoa, Camilo Thorne, Goran Glavas

Proceedings of the 5th Brazilian Conference on Intelligent Systems, 2016

Spanish NER with Word Representations and Conditional Random Fields.

Jenny Copara, José Ochoa, Camilo Thorne, Goran Glavas

Proceedings of the Sixth Named Entity Workshop, 2016

2015

Semantic Complexity of Quantifiers and Their Distribution in Corpora.

Jakub Szymanik, Camilo Thorne

Proceedings of the 11th International Conference on Computational Semantics, 2015

Towards Decision Making via Expressive Probabilistic Ontologies.

Erman Acar, Camilo Thorne, Heiner Stuckenschmidt

Proceedings of the Algorithmic Decision Theory - 4th International Conference, 2015

2014

The Expressive Power of DL-Lite.

Camilo Thorne

CoRR, 2014

Chases and Bag-Set Certain Answers.

Camilo Thorne

CoRR, 2014

2013

Automated Activity Recognition in Clinical Documents.

Camilo Thorne, Marco Montali, Diego Calvanese, Elena Cardillo, Claudio Eccher

Proceedings of the Sixth International Joint Conference on Natural Language Processing, 2013

Process Fragment Recognition in Clinical Documents.

Camilo Thorne, Elena Cardillo, Claudio Eccher, Marco Montali, Diego Calvanese

Proceedings of the AI*IA 2013: Advances in Artificial Intelligence, 2013

2012

Tractability and Intractability of Controlled Languages for Data Access.

Camilo Thorne, Diego Calvanese

Stud Logica, 2012

2011

Querying the Fragments of English.

Camilo Thorne

Proceedings of the Logic, Language, Information and Computation, 2011

2009

Controlled Aggregate Tree Shaped Questions over Ontologies.

Camilo Thorne, Diego Calvanese

Proceedings of the Flexible Query Answering Systems, 8th International Conference, 2009

Exploring Controlled English Ontology-Based Data Access.

Camilo Thorne, Diego Calvanese

Proceedings of the Pre-Proceedings of the Workshop on Controlled Natural Language (CNL 2009), 2009

Controlled English Ontology-Based Data Access.

Camilo Thorne, Diego Calvanese

Proceedings of the Controlled Natural Language, Workshop on Controlled Natural Language, 2009

The Data Complexity of the Syllogistic Fragments of English.

Camilo Thorne, Diego Calvanese

Proceedings of the Logic, Language and Meaning - 17th Amsterdam Colloquium, 2009

2008

Aggregate queries over ontologies.

Diego Calvanese, Evgeny Kharlamov, Werner Nutt, Camilo Thorne

Proceedings of the 2nd International Workshop on Ontologies and Information Systems for the Semantic Web, 2008

2007

Categorial Module Grammars of Bounded Size have Finite Bounded Density.

Camilo Thorne

Proceedings of the LATA 2007. Proceedings of the 1st International Conference on Language and Automata Theory and Applications., 2007

Expressing DL-Lite Ontologies with Controlled English.

Raffaella Bernardi, Diego Calvanese, Camilo Thorne

Proceedings of the 2007 International Workshop on Description Logics (DL2007), 2007

English Querying over Ontologies: E-QuOnto.

Raffaella Bernardi, Francesca Bonin, Diego Calvanese, Domenico Carbotta, Camilo Thorne

Proceedings of the AI*IA 2007: Artificial Intelligence and Human-Oriented Computing, 2007