Camille Marchet

Orcid: 0000-0002-7235-7346

According to our database1, Camille Marchet authored at least 15 papers between 2014 and 2025.

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Timeline

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Bibliography

2025
Fractional hitting sets for efficient multiset sketching.
Algorithms Mol. Biol., December, 2025

2024
<i>KaMRaT</i>: a C++ toolkit for <i>k</i>-mer count matrix dimension reduction.
Bioinform., March, 2024

On the number of <i>k</i>-mers admitting a given lexicographical minimizer.
CoRR, 2024

Conway-Bromage-Lyndon (CBL): an exact, dynamic representation of <i>k</i>-mer sets.
Bioinform., 2024

Cdbgtricks: Strategies to update a compacted de Bruijn graph.
Proceedings of the Prague Stringology Conference 2024, 2024

2023
Scalable sequence database search using partitioned aggregated Bloom comb trees.
Bioinform., 2023

Fractional Hitting Sets for Efficient and Lightweight Genomic Data Sketching.
Proceedings of the 23rd International Workshop on Algorithms in Bioinformatics, 2023

2021
BLight: efficient exact associative structure for k-mers.
Bioinform., 2021

2020
A resource-frugal probabilistic dictionary and applications in bioinformatics.
Discret. Appl. Math., 2020

REINDEER: efficient indexing of k-mer presence and abundance in sequencing datasets.
Bioinform., 2020

Comparative assessment of long-read error correction software applied to Nanopore RNA-sequencing data.
Briefings Bioinform., 2020

2018
From reads to transcripts: de novo methods for the analysis of transcriptome second and third generation sequencing. (Des lectures aux transcrits: méthodes de novo pour l'analyse du séquençage des transcriptomes de deuxième et troisième génération).
PhD thesis, 2018

2017
Playing hide and seek with repeats in local and global de novo transcriptome assembly of short RNA-seq reads.
Algorithms Mol. Biol., 2017

2016
A Resource-frugal Probabilistic Dictionary and Applications in (Meta)Genomics.
Proceedings of the Prague Stringology Conference 2016, 2016

2014
Navigating in a Sea of Repeats in RNA-seq without Drowning.
Proceedings of the Algorithms in Bioinformatics - 14th International Workshop, 2014


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