Bruno W. S. Sobral

According to our database, Bruno W. S. Sobral authored at least 26 papers between 2000 and 2015.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2015

RNA-Rocket: an RNA-Seq analysis resource for infectious disease research.

Andrew S. Warren, Cristina Aurrecoechea, Brian P. Brunk, Prerak Desai, Scott J. Emrich, Gloria I. Giraldo-Calderón, Omar S. Harb, Deborah Hix, Daniel Lawson, Dustin Machi, Chunhong Mao, Michael McClelland, Eric K. Nordberg, Maulik Shukla, Leslie B. Vosshall, Alice R. Wattam, Rebecca Will, Hyun Seung Yoo, Bruno W. S. Sobral

Bioinform., 2015

Curation, integration and visualization of bacterial virulence factors in PATRIC.

Chunhong Mao, David Abraham, Alice R. Wattam, Meredith J. C. Wilson, Maulik Shukla, Hyun Seung Yoo, Bruno W. S. Sobral

Bioinform., 2015

2014

PATRIC, the bacterial bioinformatics database and analysis resource.

Alice R. Wattam, David Abraham, Oral Dalay, Terry Disz, Timothy Driscoll, Joseph L. Gabbard, Joseph J. Gillespie, Roger Gough, Deborah Hix, Ronald W. Kenyon, Dustin Machi, Chunhong Mao, Eric K. Nordberg, Robert Olson, Ross A. Overbeek, Gordon D. Pusch, Maulik Shukla, Julie Schulman, Rick L. Stevens, Daniel E. Sullivan, Veronika Vonstein, Andrew S. Warren, Rebecca Will, Meredith J. C. Wilson, Hyun Seung Yoo, Chengdong Zhang, Yan Zhang, Bruno W. S. Sobral

Nucleic Acids Res., 2014

2012

Overview of the ID, EPI and REL tasks of BioNLP Shared Task 2011.

Sampo Pyysalo, Tomoko Ohta, Rafal Rak, Daniel E. Sullivan, Chunhong Mao, Chunxia Wang, Bruno W. S. Sobral, Jun'ichi Tsujii, Sophia Ananiadou

BMC Bioinform., 2012

2011

Integration and visualization of host-pathogen data related to infectious diseases.

Timothy Driscoll, Joseph L. Gabbard, Chunhong Mao, Oral Dalay, Maulik Shukla, Clark C. Freifeld, Anne Gatewood Hoen, John S. Brownstein, Bruno W. S. Sobral

Bioinform., 2011

Informatics-Driven Infectious Disease Research.

Bruno W. S. Sobral, Chunhong Mao, Maulik Shukla, Daniel E. Sullivan, Chengdong Zhang

Proceedings of the Biomedical Engineering Systems and Technologies, 2011

Informatics-driven Infectious Disease Research.

Bruno W. S. Sobral

Proceedings of the BIODEVICES 2011, 2011

Overview of the Infectious Diseases (ID) task of BioNLP Shared Task 2011.

Sampo Pyysalo, Tomoko Ohta, Rafal Rak, Daniel E. Sullivan, Chunhong Mao, Chunxia Wang, Bruno W. S. Sobral, Jun'ichi Tsujii, Sophia Ananiadou

Proceedings of BioNLP Shared Task 2011 Workshop, Portland, Oregon, USA, June 24, 2011, 2011

2010

Towards Event Extraction from Full Texts on Infectious Diseases.

Sampo Pyysalo, Tomoko Ohta, Han-Cheol Cho, Daniel E. Sullivan, Chunhong Mao, Bruno W. S. Sobral, Jun'ichi Tsujii, Sophia Ananiadou

Proceedings of the 2010 Workshop on Biomedical Natural Language Processing, 2010

2009

Temporal Controls of the Asymmetric Cell Division Cycle in <i>Caulobacter crescentus</i>.

Shenghua Li, Paul Brazhnik, Bruno W. S. Sobral, John J. Tyson

PLoS Comput. Biol., 2009

PIG - the pathogen interaction gateway.

Tim Driscoll, Matthew D. Dyer, T. M. Murali, Bruno W. S. Sobral

Nucleic Acids Res., 2009

2008

A Quantitative Study of the Division Cycle of <i>Caulobacter crescentus</i> Stalked Cells.

Shenghua Li, Paul Brazhnik, Bruno W. S. Sobral, John J. Tyson

PLoS Comput. Biol., 2008

An emerging cyberinfrastructure for biodefense pathogen and pathogen-host data.

C. Zhang, Oswald Crasta, Stephen A. Cammer, Rebecca Will, Ron Kenyon, Daniel E. Sullivan, Q. Yu, W. Sun, R. Jha, D. Liu, Tian Xue, Y. Zhang, M. Moore, Peter B. McGarvey, Hongzhan Huang, Yongxing Chen, J. Zhang, Raja Mazumder, Cathy H. Wu, Bruno W. S. Sobral

Nucleic Acids Res., 2008

2007

PATRIC: The VBI PathoSystems Resource Integration Center.

E. E. Snyder, N. Kampanya, J. Lu, Eric K. Nordberg, H. R. Karur, Maulik Shukla, Jeetendra Soneja, Y. Tian, Tian Xue, Hyun Seung Yoo, Fengkai Zhang, C. Dharmanolla, N. V. Dongre, Joseph J. Gillespie, J. Hamelius, M. Hance, K. I. Huntington, D. Jukneliene, J. Koziski, L. Mackasmiel, S. P. Mane, V. Nguyen, A. Purkayastha, J. Shallom, G. Yu, Y. Guo, Joseph L. Gabbard, Deborah Hix, A. F. Azad, S. C. Baker, S. M. Boyle, Y. Khudyakov, X. J. Meng, C. Rupprecht, J. Vinje, Oswald Crasta, M. J. Czar, Allan Dickerman, J. Dana Eckart, Ron Kenyon, Rebecca Will, João C. Setubal, Bruno W. S. Sobral

Nucleic Acids Res., 2007

Computational prediction of host-pathogen protein-protein interactions.

Matthew D. Dyer, T. M. Murali, Bruno W. S. Sobral

Proceedings of the Proceedings 15th International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), 2007

A Generalized Framework for Pathosystems Informatics & Bioinformatics Web Services.

Tian Xue, Boyu Yang, Rebecca Will, Bruce Sharp, Ron Kenyon, Oswald Crasta, Bruno W. S. Sobral

Proceedings of the International Conference on Bioinformatics & Computational Biology, 2007

2006

Genome Annotation and Comparison System.

Jing Zhao, Tian Xue, Boyu Yang, Kelly Williams, Alice R. Wattam, Rebecca Will, Bruce Sharp, Ron Kenyon, Oswald Crasta, Bruno W. S. Sobral

Proceedings of the 2006 International Conference on Bioinformatics & Computational Biology, 2006

Bioinformatics Web Services.

Boyu Yang, Tian Xue, Jing Zhao, Chaitanya Kommidi, Jeetendra Soneja, Jian Li, Rebecca Will, Bruce Sharp, Ron Kenyon, Oswald Crasta, Bruno W. S. Sobral

Proceedings of the 2006 International Conference on Bioinformatics & Computational Biology, 2006

2005

NodMutDB: a database for genes and mutants involved in symbiosis.

Chunhong Mao, Jing Qiu, Chunxia Wang, Trevor C. Charles, Bruno W. S. Sobral

Bioinform., 2005

PIML: the Pathogen Information Markup Language.

Yongqun He, Richard R. Vines, Alice R. Wattam, Georgiy V. Abramochkin, Allan Dickerman, J. Dana Eckart, Bruno W. S. Sobral

Bioinform., 2005

Cyberinfrastructure for PathoSystems Biology.

Bruno W. S. Sobral

Proceedings of the Advances in Bioinformatics and Computational Biology, 2005

ToolBus - An Interoperable Environment for Biological Researchers.

Boyu Yang, J. Dana Eckart, Eric K. Nordberg, Bruno W. S. Sobral

Proceedings of The 2005 International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences, 2005

2003

A Life Scientist's Gateway to Distributed Data Management and Computing: The PathPort/ToolBus Framework.

J. Dana Eckart, Bruno W. S. Sobral

OMICS, 2003

2001

The Arabidopsis Information Resource (TAIR): a comprehensive database and web-based information retrieval, analysis, and visualization system for a model plant.

Eva Huala, Allan Dickerman, Margarita Garcia-Hernandez, Danforth Weems, Leonore Reiser, Frank LaFond, David Hanley, Donald Kiphart, Mingzhe Zhuang, Wen Huang, Lukas A. Mueller, Debika Bhattacharyya, Devaki Bhaya, Bruno W. S. Sobral, William D. Beavis, David Meinke, Christopher D. Town, Chris Somerville, Seung Yon Rhee

Nucleic Acids Res., 2001

ISYS: a decentralized, component-based approach to the integration of heterogeneous bioinformatics resources.

Adam C. Siepel, Andrew D. Farmer, Andrew N. Tolopko, Mingzhe Zhuang, Pedro Mendes, William D. Beavis, Bruno W. S. Sobral

Bioinform., 2001

2000

The Phytophthora Genome Initiative Database: informatics and analysis for distributed pathogenomic research.

Mark E. Waugh, Peter T. Hraber, Jennifer W. Weller, Yihe Wu, Guanghong Chen, Jeff T. Inman, Donald Kiphart, Bruno W. S. Sobral

Nucleic Acids Res., 2000