Breschine Cummins

According to our database, Breschine Cummins authored at least 18 papers between 2010 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Subnetwork inclusion and switching of multilevel Boolean networks preserve parameter graph structure and dynamics.

William Duncan, Breschine Cummins, Tomás Gedeon

Frontiers Appl. Math. Stat., 2024

2023

Oscillator death in coupled biochemical oscillators.

Tomás Gedeon, Breschine Cummins

Math. Control. Signals Syst., December, 2023

2022

Experimental guidance for discovering genetic networks through hypothesis reduction on time series.

Breschine Cummins, Francis C. Motta, Robert C. Moseley, Anastasia Deckard, Sophia Campione, Marcio Gameiro, Tomás Gedeon, Konstantin Mischaikow, Steven B. Haase

PLoS Comput. Biol., October, 2022

Extending Combinatorial Regulatory Network Modeling to Include Activity Control and Decay Modulation.

Bree Cummins, Marcio Gameiro, Tomás Gedeon, Shane Kepley, Konstantin Mischaikow, Lun Zhang

SIAM J. Appl. Dyn. Syst., September, 2022

Joint realizability of monotone Boolean functions.

Peter Crawford-Kahrl, Bree Cummins, Tomás Gedeon

Theor. Comput. Sci., 2022

Extremal Event Graphs: A (Stable) Tool for Analyzing Noisy Time Series Data.

Robin Belton, Bree Cummins, Brittany Terese Fasy, Tomás Gedeon

CoRR, 2022

Conservation of dynamic characteristics of transcriptional regulatory elements in periodic biological processes.

Francis C. Motta, Robert C. Moseley, Bree Cummins, Anastasia Deckard, Steven B. Haase

BMC Bioinform., 2022

2020

Multistability in the epithelial-mesenchymal transition network.

Ying Xin, Bree Cummins, Tomás Gedeon

BMC Bioinform., 2020

2019

Comparison of Combinatorial Signatures of Global Network Dynamics Generated by Two Classes of ODE Models.

Peter Crawford-Kahrl, Bree Cummins, Tomás Gedeon

SIAM J. Appl. Dyn. Syst., 2019

A poset metric from the directed maximum common edge subgraph.

Robert Nerem, Peter Crawford-Kahrl, Bree Cummins, Tomás Gedeon

CoRR, 2019

2018

Model Rejection and Parameter Reduction via Time Series.

Bree Cummins, Tomás Gedeon, Shaun Harker, Konstantin Mischaikow

SIAM J. Appl. Dyn. Syst., 2018

Identifying robust hysteresis in networks.

Tomás Gedeon, Bree Cummins, Shaun Harker, Konstantin Mischaikow

PLoS Comput. Biol., 2018

Combinatorial Dynamics for Regulatory Networks.

Zane Huttinga, Bree Cummins, Tomas Geadon

Proceedings of the Molecular Logic and Computational Synthetic Biology, 2018

2017

Database of Dynamic Signatures Generated by Regulatory Networks (DSGRN).

Bree Cummins, Tomás Gedeon, Shaun Harker, Konstantin Mischaikow

Proceedings of the Computational Methods in Systems Biology, 2017

2016

Combinatorial Representation of Parameter Space for Switching Networks.

Bree Cummins, Tomás Gedeon, Shaun Harker, Konstantin Mischaikow, Kafung Mok

SIAM J. Appl. Dyn. Syst., 2016

2015

On the Efficacy of State Space Reconstruction Methods in Determining Causality.

Bree Cummins, Tomás Gedeon, Kelly Spendlove

SIAM J. Appl. Dyn. Syst., 2015

2012

A Spatial Model of Mosquito Host-Seeking Behavior.

Bree Cummins, Ricardo Cortez, Ivo M. Foppa, Justin Walbeck, James Mac Hyman

PLoS Comput. Biol., 2012

2010

Computation of three-dimensional Brinkman flows using regularized methods.

Ricardo Cortez, Bree Cummins, Karin Leiderman, Douglas Varela

J. Comput. Phys., 2010