Brandon Cook

According to our database, Brandon Cook authored at least 37 papers between 2014 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Accelerating LULESH using HPX - the C++ Standard Library for Parallelism and Concurrency.

Srinivas Yadav Singanaboina, Weile Wei, Isidoros Tsaousis Seiras, Panagiotis Syskakis, Bradley Richardson, Brandon Cook, Hartmut Kaiser

Proceedings of the Practice and Experience in Advanced Research Computing 2024: Human Powered Computing, 2024

Scheduling and Allocation of Disaggregated Memory Resources in HPC Systems.

Jie Li, George Michelogiannakis, Brandon Cook, John Shalf, Yong Chen

Proceedings of the IEEE International Parallel and Distributed Processing Symposium, 2024

2023

ARcode: HPC Application Recognition Through Image-encoded Monitoring Data.

Jie Li, Brandon Cook, Yong Chen

CoRR, 2023

Analyzing Resource Utilization in an HPC System: A Case Study of NERSC Perlmutter.

Jie Li, George Michelogiannakis, Brandon Cook, Dulanya Cooray, Yong Chen

CoRR, 2023

Not all applications have boring communication patterns: Profiling message matching with BMM.

Taylor L. Groves, Naveen Ravichandrasekaran, Brandon Cook, Noel Keen, David Trebotich, Nicholas J. Wright, Bob Alverson, Duncan Roweth, Keith D. Underwood

Concurr. Comput. Pract. Exp., 2023

Analyzing Resource Utilization in an HPC System: A Case Study of NERSC's Perlmutter.

Jie Li, George Michelogiannakis, Brandon Cook, Dulanya Cooray, Yong Chen

Proceedings of the High Performance Computing - 38th International Conference, 2023

Fault-Tolerant LOBPCG for Nuclear CI Calculations.

Meiyue Shao, Dossay Oryspayev, Chao Yang, Pieter Maris, Brandon G. Cook

Proceedings of the International Conference on High Performance Computing in Asia-Pacific Region, 2023

Efficient Intra-Rack Resource Disaggregation for HPC Using Co-Packaged DWDM Photonics.

George Michelogiannakis, Yehia Arafa, Brandon Cook, Liang Yuan Dai, Abdel-Hameed A. Badawy, Madeleine Glick, Yuyang Wang, Keren Bergman, John Shalf

Proceedings of the IEEE International Conference on Cluster Computing, 2023

2022

A Case For Intra-rack Resource Disaggregation in HPC.

George Michelogiannakis, Benjamin Klenk, Brandon Cook, Min Yee Teh, Madeleine Glick, Larry Dennison, Keren Bergman, John Shalf

ACM Trans. Archit. Code Optim., 2022

Accelerating an iterative eigensolver for nuclear structure configuration interaction calculations on GPUs using OpenACC.

Pieter Maris, Chao Yang, Dossay Oryspayev, Brandon Cook

J. Comput. Sci., 2022

2021

Accelerating Quantum Many-Body Configuration Interaction with Directives.

Brandon Cook, Patrick J. Fasano, Pieter Maris, Chao Yang, Dossay Oryspayev

Proceedings of the Accelerator Programming Using Directives - 8th International Workshop, 2021

Monitoring Scientific Python Usage on a Supercomputer.

Rollin C. Thomas, Laurie Stephey, Annette Greiner, Brandon Cook

Proceedings of the 20th Python in Science Conference 2021 (SciPy 2021), Virtual Conference, July 12, 2021

An Extended Roofline Performance Model with PCI-E and Network Ceilings.

Amanda S. Dufek, Jack R. Deslippe, Paul T. Lin, Charlene J. Yang, Brandon G. Cook, Jonathan Madsen

Proceedings of the 2021 International Workshop on Performance Modeling, 2021

Case Study of Using Kokkos and SYCL as Performance-Portable Frameworks for Milc-Dslash Benchmark on NVIDIA, AMD and Intel GPUs.

Amanda S. Dufek, Rahulkumar Gayatri, Neil A. Mehta, Douglas Doerfler, Brandon Cook, Yasaman Ghadar, Carleton DeTar

Proceedings of the International Workshop on Performance, 2021

2020

Tuning floating-point precision using dynamic program information and temporal locality.

Hugo Brunie, Costin Iancu, Khaled Z. Ibrahim, Philip Brisk, Brandon Cook

Proceedings of the International Conference for High Performance Computing, 2020

Evaluation of the Communication Motif for a Distributed Eigensolver using the SST Network Simulation Tool.

Md. Afibuzzaman, Pieter Maris, Taylor L. Groves, Dossay Oryspayev, Brandon Cook, Chao Yang, Hasan Metin Aktulga

Proceedings of the 2020 IEEE/ACM Performance Modeling, 2020

The Case of Performance Variability on Dragonfly-based Systems.

Abhinav Bhatele, Jayaraman J. Thiagarajan, Taylor L. Groves, Rushil Anirudh, Staci A. Smith, Brandon Cook, David K. Lowenthal

Proceedings of the 2020 IEEE International Parallel and Distributed Processing Symposium (IPDPS), 2020

Scaling of Union of Intersections for Inference of Granger Causal Networks from Observational Data.

Mahesh Balasubramanian, Trevor D. Ruiz, Brandon Cook, Prabhat, Sharmodeep Bhattacharyya, Aviral Shrivastava, Kristofer E. Bouchard

Proceedings of the 2020 IEEE International Parallel and Distributed Processing Symposium (IPDPS), 2020

Quantifying the impact of network congestion on application performance and network metrics.

Yijia Zhang, Taylor L. Groves, Brandon Cook, Nicholas J. Wright, Ayse K. Coskun

Proceedings of the IEEE International Conference on Cluster Computing, 2020

2019

Eigensolver performance comparison on Cray XC systems.

Brandon Cook, Thorsten Kurth, Jack Deslippe, Pierre Carrier, Nick Hill, Nathan Wichmann

Concurr. Comput. Pract. Exp., 2019

Enabling Continuous Testing of HPC Systems Using ReFrame.

Vasileios Karakasis, Theofilos Manitaras, Victor Holanda Rusu, Rafael Sarmiento-Pérez, Christopher Bignamini, Matthias Kraushaar, Andreas Jocksch, Samuel Omlin, Guilherme Peretti-Pezzi, João P. S. C. Augusto, Brian Friesen, Yun (Helen) He, Lisa Gerhardt, Brandon Cook, Zhi-Qiang You, Samuel Khuvis, Karen Tomko

Proceedings of the Tools and Techniques for High Performance Computing, 2019

2018

Optimizing the Union of Intersections LASSO (UoI_LASSO) and Vector Autoregressive (UoI_VAR) Algorithms for Improved Statistical Estimation at Scale.

Mahesh Balasubramanian, Trevor D. Ruiz, Brandon Cook, Sharmodeep Bhattacharyya, Prabhat, Aviral Shrivastava, Kristofer E. Bouchard

CoRR, 2018

Preparing NERSC users for Cori, a Cray XC40 system with Intel many integrated cores.

Yun (Helen) He, Brandon Cook, Jack Deslippe, Brian Friesen, Richard A. Gerber, Rebecca Hartman-Baker, Alice Koniges, Thorsten Kurth, Stephen Leak, Woo-Sun Yang, Zhengji Zhao, Eddie Baron, Peter Hauschildt

Concurr. Comput. Pract. Exp., 2018

Evaluating the networking characteristics of the Cray XC-40 Intel Knights Landing-based Cori supercomputer at NERSC.

Douglas Doerfler, Brian Austin, Brandon Cook, Jack Deslippe, Krishna Kandalla, Peter Mendygral

Concurr. Comput. Pract. Exp., 2018

Sparse CSB_Coo Matrix-Vector and Matrix-Matrix Performance on Intel Xeon Architectures.

Brandon Cook, Charlene Yang, Thorsten Kurth, Jack Deslippe

Proceedings of the High Performance Computing, 2018

A Metric for Evaluating Supercomputer Performance in the Era of Extreme Heterogeneity.

Brian Austin, Christopher S. Daley, Douglas Doerfler, Jack Deslippe, Brandon Cook, Brian Friesen, Thorsten Kurth, Charlene Yang, Nicholas J. Wright

Proceedings of the 2018 IEEE/ACM Performance Modeling, 2018

2017

Analyzing Performance of Selected NESAP Applications on the Cori HPC System.

Thorsten Kurth, William Arndt, Taylor Barnes, Brandon Cook, Jack Deslippe, Douglas Doerfler, Brian Friesen, Yun (Helen) He, Tuomas Koskela, Mathieu Lobet, Tareq M. Malas, Leonid Oliker, Andrey Ovsyannikov, Samuel Williams, Woo-Sun Yang, Zhengji Zhao

Proceedings of the High Performance Computing, 2017

Performance Variability on Xeon Phi.

Brandon Cook, Thorsten Kurth, Brian Austin, Samuel Williams, Jack Deslippe

Proceedings of the High Performance Computing, 2017

MerBench: PGAS Benchmarks for High Performance Genome Assembly.

Evangelos Georganas, Marquita Ellis, Rob Egan, Steven A. Hofmeyr, Aydin Buluç, Brandon Cook, Leonid Oliker, Katherine A. Yelick

Proceedings of PAW@SC 2017: Second Annual PGAS Applications Workshop, 2017

Multi-source sensor fusion for small unmanned aircraft systems using fuzzy logic.

Brandon Cook, Kelly Cohen

Proceedings of the 2017 IEEE International Conference on Fuzzy Systems, 2017

Performance Characterization of De Novo Genome Assembly on Leading Parallel Systems.

Marquita Ellis, Evangelos Georganas, Rob Egan, Steven A. Hofmeyr, Aydin Buluç, Brandon Cook, Leonid Oliker, Katherine A. Yelick

Proceedings of the Euro-Par 2017: Parallel Processing - 23rd International Conference on Parallel and Distributed Computing, Santiago de Compostela, Spain, August 28, 2017

2016

Applying the Roofline Performance Model to the Intel Xeon Phi Knights Landing Processor.

Douglas Doerfler, Jack Deslippe, Samuel Williams, Leonid Oliker, Brandon Cook, Thorsten Kurth, Mathieu Lobet, Tareq M. Malas, Jean-Luc Vay, Henri Vincenti

Proceedings of the High Performance Computing, 2016

High Performance Optimizations for Nuclear Physics Code MFDn on KNL.

Brandon Cook, Pieter Maris, Meiyue Shao, Nathan Wichmann, Marcus Wagner, John O'Neill, Thanh Phung, Gaurav Bansal

Proceedings of the High Performance Computing, 2016

Evaluating and Optimizing the NERSC Workload on Knights Landing.

Taylor Barnes, Brandon Cook, Jack Deslippe, Douglas Doerfler, Brian Friesen, Yun (Helen) He, Thorsten Kurth, Tuomas Koskela, Mathieu Lobet, Tareq M. Malas, Leonid Oliker, Andrey Ovsyannikov, Abhinav Sarje, Jean-Luc Vay, Henri Vincenti, Samuel Williams, Pierre Carrier, Nathan Wichmann, Marcus Wagner, Paul R. C. Kent, Christopher Kerr, John M. Dennis

Proceedings of the 7th International Workshop on Performance Modeling, 2016

MPI usage at NERSC: Present and Future.

Alice Koniges, Brandon Cook, Jack Deslippe, Thorsten Kurth, Hongzhang Shan

Proceedings of the 23rd European MPI Users' Group Meeting, EuroMPI 2016, 2016

OpenMP Parallelization and Optimization of Graph-Based Machine Learning Algorithms.

Zhaoyi Meng, Alice Koniges, Yun (Helen) He, Samuel Williams, Thorsten Kurth, Brandon Cook, Jack Deslippe, Andrea L. Bertozzi

Proceedings of the OpenMP: Memory, Devices, and Tasks, 2016

2014

Applied Mathematics: Methods and Matlab.

Brandon G. Cook

Comput. Sci. Eng., 2014