Bo Liu

Affiliations:

Harbin Institute of Technology, School of Computer Sciences and Technology, Center for Bioinformatics, Harbin, China

According to our database¹, Bo Liu authored at least 37 papers between 2012 and 2023.

Collaborative distances:

Dijkstra number² of four.
Erdős number³ of four.

Timeline

Legend:

Book

In proceedings

Article

PhD thesis

Dataset

Other

Bibliography

2023

Struct2GO: protein function prediction based on graph pooling algorithm and AlphaFold2 structure information.

[BibT_eX]

[DOI]

Bioinform., October, 2023

Prot2GO: Predicting GO Annotations From Protein Sequences and Interactions.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

PSPGO: Cross-Species Heterogeneous Network Propagation for Protein Function Prediction.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

ScCCL: Single-Cell Data Clustering Based on Self-Supervised Contrastive Learning.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

2022

Deepgmd: A Graph-Neural-Network-Based Method to Detect Gene Regulator Module.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2022

OTUCD: Unsupervised GCN based metagenomics non-overlapping community detection.

[BibT_eX]

[DOI]

Comput. Biol. Chem., 2022

2021

deGSM: Memory Scalable Construction Of Large Scale de Bruijn Graph.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2021

ScGSLC: An unsupervised graph similarity learning framework for single-cell RNA-seq data clustering.

[BibT_eX]

[DOI]

Comput. Biol. Chem., 2021

Fast and SNP-aware short read alignment with SALT.

[BibT_eX]

[DOI]

Wei Quan

Bo Liu

Yadong Wang

BMC Bioinform., 2021

IIMLP: integrated information-entropy-based method for LncRNA prediction.

[BibT_eX]

[DOI]

BMC Bioinform., 2021

Factor graph-aggregated heterogeneous network embedding for disease-gene association prediction.

[BibT_eX]

[DOI]

BMC Bioinform., 2021

SKSV: ultrafast structural variation detection from circular consensus sequencing reads.

[BibT_eX]

[DOI]

Bioinform., 2021

Erratum to: abPOA: an SIMD-based C library for fast partial order alignment using adaptive band.

[BibT_eX]

[DOI]

Bioinform., 2021

abPOA: an SIMD-based C library for fast partial order alignment using adaptive band.

[BibT_eX]

[DOI]

Bioinform., 2021

ScSSC: Semi-supervised Single Cell Clustering Based on 2D Embedding.

[BibT_eX]

[DOI]

Proceedings of the Intelligent Computing Theories and Application, 2021

2020

Prognostic prediction of carcinoma by a differential-regulatory-network-embedded deep neural network.

[BibT_eX]

[DOI]

Comput. Biol. Chem., 2020

GONET: A Deep Network to Annotate Proteins via Recurrent Convolution Networks.

[BibT_eX]

[DOI]

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

Assessment of Machine Learning Methods for Classification in Single Cell ATAC-seq.

[BibT_eX]

[DOI]

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

2019

Fast read alignment with incorporation of known genomic variants.

[BibT_eX]

[DOI]

BMC Medical Informatics Decis. Mak., 2019

Integrated entropy-based approach for analyzing exons and introns in DNA sequences.

[BibT_eX]

[DOI]

BMC Bioinform., 2019

rMETL: sensitive mobile element insertion detection with long read realignment.

[BibT_eX]

[DOI]

Bioinform., 2019

TideHunter: efficient and sensitive tandem repeat detection from noisy long-reads using seed-and-chain.

[BibT_eX]

[DOI]

Bioinform., 2019

Prediction of Human LncRNAs Based on Integrated Information Entropy Features.

[BibT_eX]

[DOI]

Proceedings of the Intelligent Computing Theories and Application, 2019

A Bidirectional Fuzzy Index and Approximate Search Algorithm for Next Generation Sequencing.

[BibT_eX]

[DOI]

Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

SALT: a fast, memory-efficient and SNP-aware short read alignment tool.

[BibT_eX]

[DOI]

Wei Quan

Bo Liu

Yadong Wang

Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

2018

Fast variation-aware read alignment with deBGA-VARA.

[BibT_eX]

[DOI]

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

deSPI: efficient classification of metagenomics reads with lightweight de Bruijn graph-based reference indexing.

[BibT_eX]

[DOI]

Dengfeng Guan

Bo Liu

Yadong Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

rCANID: read Clustering and Assembly-based Novel Insertion Detection tool.

[BibT_eX]

[DOI]

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

2017

Accurate annotation of metagenomic data without species-level references.

[BibT_eX]

[DOI]

Int. J. Data Min. Bioinform., 2017

rMFilter: acceleration of long read-based structure variation calling by chimeric read filtering.

[BibT_eX]

[DOI]

Bioinform., 2017

LAMSA: fast split read alignment with long approximate matches.

[BibT_eX]

[DOI]

Bo Liu

Yan Gao

Yadong Wang

Bioinform., 2017

2016

deBWT: parallel construction of Burrows-Wheeler Transform for large collection of genomes with de Bruijn-branch encoding.

[BibT_eX]

[DOI]

Bo Liu

Dixian Zhu

Yadong Wang

Bioinform., 2016

rHAT: fast alignment of noisy long reads with regional hashing.

[BibT_eX]

[DOI]

Bioinform., 2016

deBGA: read alignment with de Bruijn graph-based seed and extension.

[BibT_eX]

[DOI]

Bioinform., 2016

2015

misFinder: identify mis-assemblies in an unbiased manner using reference and paired-end reads.

[BibT_eX]

[DOI]

BMC Bioinform., 2015

2013

PERGA: A Paired-End Read Guided De Novo Assembler for Extending Contigs Using SVM Approach.

[BibT_eX]

[DOI]

Proceedings of the ACM Conference on Bioinformatics, 2013

2012

A differentor-based adaptive ontology-matching approach.

[BibT_eX]

[DOI]

Peigang Xu

Yadong Wang

Bo Liu

J. Inf. Sci., 2012

Bo Liu

Timeline

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On csauthors.net:

Bibliography

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