Birte Kehr

According to our database, Birte Kehr authored at least 15 papers between 2011 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

How Do Users Design Scientific Workflows? The Case of Snakemake and Nextflow.

Sebastian Pohl, Nourhan Elfaramawy, Artur Miling, Kedi Cao, Birte Kehr, Matthias Weidlich

Proceedings of the 36th International Conference on Scientific and Statistical Database Management, 2024

2023

How do users design scientific workflows? The Case of Snakemake.

Sebastian Pohl, Nourhan Elfaramawy, Kedi Cao, Birte Kehr, Matthias Weidlich

CoRR, 2023

From Program Chains to Exploratory Workflows: PopinSnake for Genomic Insertion Detection.

Kedi Cao, Nourhan Elfaramawy, Matthias Weidlich, Birte Kehr

Proceedings of the 19th IEEE International Conference on e-Science, 2023

2022

Population-scale detection of non-reference sequence variants using colored de Bruijn graphs.

Thomas Krannich, W. Timothy J. White, Sebastian Niehus, Guillaume Holley, Bjarni V. Halldórsson, Birte Kehr

Bioinform., 2022

2021

The Collaborative Research Center FONDA.

Ulf Leser, Marcus Hilbrich, Claudia Draxl, Peter Eisert, Lars Grunske, Patrick Hostert, Dagmar Kainmüller, Odej Kao, Birte Kehr, Timo Kehrer, Christoph Koch, Volker Markl, Henning Meyerhenke, Tilmann Rabl, Alexander Reinefeld, Knut Reinert, Kerstin Ritter, Björn Scheuermann, Florian Schintke, Nicole Schweikardt, Matthias Weidlich

Datenbank-Spektrum, 2021

GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data.

Julia Markowski, Rieke Kempfer, Alexander Kukalev, Ibai Irastorza-Azcarate, Gesa Loof, Birte Kehr, Ana Pombo, Sven Rahmann, Roland F. Schwarz

Bioinform., 2021

2017

popSTR: population-scale detection of STR variants.

Snædís Kristmundsdóttir, Brynja D. Sigurpálsdóttir, Birte Kehr, Bjarni V. Halldórsson

Bioinform., 2017

2016

PopIns: population-scale detection of novel sequence insertions.

Birte Kehr, Páll Melsted, Bjarni V. Halldórsson

Bioinform., 2016

chopBAI: BAM index reduction solves I/O bottlenecks in the joint analysis of large sequencing cohorts.

Birte Kehr, Páll Melsted

Bioinform., 2016

2014

Contributions to computing and modeling multiple whole-genome alignments.

Birte Kehr

PhD thesis, 2014

Genome alignment with graph data structures: a comparison.

Birte Kehr, Kathrin Trappe, Manuel Holtgrewe, Knut Reinert

BMC Bioinform., 2014

NetCoffee: a fast and accurate global alignment approach to identify functionally conserved proteins in multiple networks.

Jialu Hu, Birte Kehr, Knut Reinert

Bioinform., 2014

2012

Hidden Breakpoints in Genome Alignments.

Birte Kehr, Knut Reinert, Aaron E. Darling

Proceedings of the Algorithms in Bioinformatics - 12th International Workshop, 2012

2011

Determination of Glycan Structure from Tandem Mass Spectra.

Sebastian Böcker, Birte Kehr, Florian Rasche

IEEE ACM Trans. Comput. Biol. Bioinform., 2011

STELLAR: fast and exact local alignments.

Birte Kehr, David Weese, Knut Reinert

BMC Bioinform., 2011