Bette T. Korber

According to our database, Bette T. Korber authored at least 17 papers between 2000 and 2016.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2016

Effect of Glycosylation on an Immunodominant Region in the V1V2 Variable Domain of the HIV-1 Envelope gp120 Protein.

Jianhui Tian, Cesar A. López, Cynthia A. Derdeyn, Morris S. Jones, Abraham Pinter, Bette T. Korber, S. Gnanakaran

PLoS Comput. Biol., 2016

Integrated sequence and immunology filovirus database at Los Alamos.

Karina Yusim, Hyejin Yoon, Brian T. Foley, Shihai Feng, Jennifer Macke, Mira Dimitrijevic, Werner Abfalterer, James Szinger, Will Fischer, Carla Kuiken, Bette T. Korber

Database J. Biol. Databases Curation, 2016

2015

CATNAP: a tool to compile, analyze and tally neutralizing antibody panels.

Hyejin Yoon, Jennifer Macke, Anthony P. West Jr., Brian T. Foley, Pamela J. Bjorkman, Bette T. Korber, Karina Yusim

Nucleic Acids Res., 2015

2013

A Mechanistic Understanding of Allosteric Immune Escape Pathways in the HIV-1 Envelope Glycoprotein.

Anurag Sethi, Jianhui Tian, Cynthia A. Derdeyn, Bette T. Korber, S. Gnanakaran

PLoS Comput. Biol., 2013

A multiple-alignment based primer design algorithm for genetically highly variable DNA targets.

Johanna Brodin, Mohan Krishnamoorthy, Gayathri Athreya, Will Fischer, Peter T. Hraber, Cheryl Gleasner, Lance Green, Bette T. Korber, Thomas Leitner

BMC Bioinform., 2013

2010

Genetic Signatures in the Envelope Glycoproteins of HIV-1 that Associate with Broadly Neutralizing Antibodies.

S. Gnanakaran, Marcus G. Daniels, Tanmoy Bhattacharya, Alan S. Lapedes, Anurag Sethi, Ming Li, Haili Tang, Kelli Greene, Hongmei Gao, Barton F. Haynes, Myron S. Cohen, George M. Shaw, Michael S. Seaman, Amit Kumar, Feng Gao, David C. Montefiori, Bette T. Korber

PLoS Comput. Biol., 2010

Estimating time since infection in early homogeneous HIV-1 samples using a poisson model.

Elena E. Giorgi, Bob Funkhouser, Gayathri Athreya, Alan S. Perelson, Bette T. Korber, Tanmoy Bhattacharya

BMC Bioinform., 2010

HIV classification using the coalescent theory.

Ingo Bulla, Anne-Kathrin Schultz, Fabian Schreiber, Ming Zhang, Thomas Leitner, Bette T. Korber, Burkhard Morgenstern, Mario Stanke

Bioinform., 2010

2009

jpHMM: Improving the reliability of recombination prediction in HIV-1.

Anne-Kathrin Schultz, Ming Zhang, Ingo Bulla, Thomas Leitner, Bette T. Korber, Burkhard Morgenstern, Mario Stanke

Nucleic Acids Res., 2009

2008

Coping with Viral Diversity in HIV Vaccine Design: A Response to Nickle et al.

Will Fischer, H. X. Liao, Barton F. Haynes, Norman L. Letvin, Bette T. Korber

PLoS Comput. Biol., 2008

Web-based design and evaluation of T-cell vaccine candidates.

James Thurmond, Hyejin Yoon, Carla Kuiken, Karina Yusim, Simon Perkins, James Theiler, Tanmoy Bhattacharya, Bette T. Korber, Will Fischer

Bioinform., 2008

2006

Immunoinformatics Comes of Age.

Bette T. Korber, Montiago LaBute, Karina Yusim

PLoS Comput. Biol., 2006

jpHMM at GOBICS: a web server to detect genomic recombinations in HIV-1.

Ming Zhang, Anne-Kathrin Schultz, Charles Calef, Carla Kuiken, Thomas Leitner, Bette T. Korber, Burkhard Morgenstern, Mario Stanke

Nucleic Acids Res., 2006

A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes.

Anne-Kathrin Schultz, Ming Zhang, Thomas Leitner, Carla Kuiken, Bette T. Korber, Burkhard Morgenstern, Mario Stanke

BMC Bioinform., 2006

HLA and HIV Infection Progression: Application of the Minimum Description Length Principle to Statistical Genetics.

Peter T. Hraber, Bette T. Korber, Steven Wolinsky, Henry A. Erlich, Elizabeth A. Trachtenberg, Thomas B. Kepler

Proceedings of the Biological and Medical Data Analysis, 7th International Symposium, 2006

2001

Retrieval and on-the-fly alignment of sequence fragments from the HIV database.

Brian Gaschen, Carla Kuiken, Bette T. Korber, Brian T. Foley

Bioinform., 2001

2000

Detecting hypermutations in viral sequences with an emphasis on G A hypermutation.

Patrick P. Rose, Bette T. Korber

Bioinform., 2000