Bernie J. Daigle Jr.

According to our database, Bernie J. Daigle Jr. authored at least 15 papers between 2008 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2021

GEOlimma: differential expression analysis and feature selection using pre-existing microarray data.

Liangqun Lu, Kevin A. Townsend, Bernie J. Daigle Jr.

BMC Bioinform., 2021

2019

icHET: interactive visualization of cytoplasmic heteroplasmy.

Vinhthuy Phan, Diem-Trang Pham, Caroline Melton, Adam J. Ramsey, Bernie J. Daigle Jr., Jennifer R. Mandel

Bioinform., 2019

2017

Proceedings of the 16th Annual UT-KBRIN Bioinformatics Summit 2016: bioinformatics: Burns, TN, USA. April 21-23, 2017.

Eric C. Rouchka, Julia H. Chariker, David Tieri, Juw Won Park, Shreedharkumar D. Rajurkar, Vikas Singh, Nishchal K. Verma, Yan Cui, Mark L. Farman, Bradford Condon, Neil Moore, Jerzy W. Jaromczyk, Jolanta Jaromczyk, Daniel R. Harris, Patrick Calie, Eun Kyong Shin, Robert L. Davis, Arash Shaban-Nejad, Joshua M. Mitchell, Robert M. Flight, Qing Jun Wang, Richard M. Higashi, Teresa W.-M. Fan, Andrew N. Lane, Hunter N. B. Moseley, Liangqun Lu, Bernie J. Daigle, Xi Chen, Andrey Smelter, Li Chen, Bailey K. Phan, Nathaniel J. Serpico, Ethan G. Toney, Caroline E. Melton, Jennifer R. Mandel, Bernie J. Daigle Jr., Hao Chen, Kazi I. Zaman, Ramin Homayouni, Patrick J. Trainor, Samantha M. Carlisle, Andrew P. DeFilippis, Shesh N. Rai

BMC Bioinform., September, 2017

2016

Proceedings of the 15th Annual UT-KBRIN Bioinformatics Summit 2016: Cadiz, KY, USA. 8-10 April 2016.

Eric C. Rouchka, Julia H. Chariker, Benjamin J. Harrison, Juw Won Park, Xueyuan Cao, Stanley Pounds, Susana C. Raimondi, James R. Downing, Raul C. Ribeiro, Jeffrey Rubnitz, Jatinder Lamba, Bernie J. Daigle Jr., Deborah Burgess, Stephanie Gehrlich, John C. Carmen, Nicholas Johnson, Chandrakanth Emani, Kalpani De Silva, Michael P. Heaton, Theodore S. Kalbfleisch, Teeradache Viangteeravat, Rahul Mudunuri, Oluwaseun Ajayi, Fatih Sen, Eunice Y. Huang, Mohammad Mohebbi, Luaire Florian, Douglas J. Jackson, John F. Naber, Akm Sabbir, Sally R. Ellingson, Yuping Lu, Charles A. Phillips, Michael A. Langston, Rahul Kumar Sevakula, Raghuveer Thirukovalluru, Nishchal K. Verma, Yan Cui, Mohammed Sayed, Jing Wang, Qi Liu, Yu Shyr, Xiaofei Zhang, Naresh Prodduturi, Gavin R. Oliver, Diane Grill, Jie Na, Jeanette Eckel-Passow, Eric W. Klee, Michael M. Goodin, Mark L. Farman, Harrison Inocencio, Chanyong Jang, Jerzy W. Jaromczyk, Neil Moore, Kelly L. Sovacool, Leon Dent, Mike Izban, Sammed N. Mandape, Shruti S. Sakhare, Siddharth Pratap, Dana Marshall, M. Scotty Depriest, James N. MacLeod, Hanady Adam, Ethan Blandford, Joel Campbell, Joshua Castlen, Brittany Dixon, Ginger Gilbert, Aaron Hall, Philip Kreisle, Jessica Lasher, Bethany Oakes, Allison Speer, Maximilian Valentine, Naga Satya Venkateswara Ra Nagisetty, Rony Jose, Robert W. Rooney, David Hains

BMC Bioinform., August, 2016

Stochastic Simulation Service: Bridging the Gap between the Computational Expert and the Biologist.

Brian Drawert, Andreas Hellander, Benjamin B. Bales, Debjani Banerjee, Giovanni Bellesia, Bernie J. Daigle Jr., Geoffrey Douglas, Mengyuan Gu, Anand Gupta, Stefan Hellander, Christopher B. Horuk, Dibyendu Nath, Aviral Takkar, Sheng Wu, Per Lötstedt, Chandra Krintz, Linda R. Petzold

PLoS Comput. Biol., 2016

Identification of disease states associated with coagulopathy in trauma.

Yuanyang Zhang, Tie Bo Wu, Bernie J. Daigle Jr., Mitchell J. Cohen, Linda R. Petzold

BMC Medical Informatics Decis. Mak., 2016

SParSE++: improved event-based stochastic parameter search.

Min K. Roh, Bernie J. Daigle Jr.

BMC Syst. Biol., 2016

2015

Inferring single-cell gene expression mechanisms using stochastic simulation.

Bernie J. Daigle Jr., Mohammad Soltani, Linda R. Petzold, Abhyudai Singh

Bioinform., 2015

A Cure Time Model for Joint Prediction of Outcome and Time-to-Outcome.

Yuanyang Zhang, Bernie J. Daigle Jr., Mitchell J. Cohen, Linda R. Petzold

Proceedings of the 2015 IEEE International Conference on Data Mining, 2015

2013

Core modular blood and brain biomarkers in social defeat mouse model for post traumatic stress disorder.

Ruoting Yang, Bernie J. Daigle Jr., Seid Y. Muhie, Rasha Hammamieh, Marti Jett, Linda R. Petzold, Francis J. Doyle III

BMC Syst. Biol., 2013

2012

Core module biomarker identification with network exploration for breast cancer metastasis.

Ruoting Yang, Bernie J. Daigle Jr., Linda R. Petzold, Francis J. Doyle III

BMC Bioinform., 2012

Accelerated maximum likelihood parameter estimation for stochastic biochemical systems.

Bernie J. Daigle Jr., Min K. Roh, Linda R. Petzold, Jarad Niemi

BMC Bioinform., 2012

2010

Using Pre-existing Microarray Datasets to Increase Experimental Power: Application to Insulin Resistance.

Bernie J. Daigle Jr., Alicia Deng, Tracey McLaughlin, Samuel W. Cushman, Margaret C. Cam, Gerald Reaven, Philip S. Tsao, Russ B. Altman

PLoS Comput. Biol., 2010

Independent component analysis: Mining microarray data for fundamental human gene expression modules.

Jesse M. Engreitz, Bernie J. Daigle Jr., Jonathan J. Marshall, Russ B. Altman

J. Biomed. Informatics, 2010

2008

M-BISON: Microarray-based integration of data sources using networks.

Bernie J. Daigle Jr., Russ B. Altman

BMC Bioinform., 2008