Benjamin Linard

According to our database, Benjamin Linard authored at least 11 papers between 2011 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

EPIK: precise and scalable evolutionary placement with informative <i>k</i>-mers.

Nikolai Romashchenko, Benjamin Linard, Fabio Pardi, Eric Rivals

Bioinform., December, 2023

Computing Phylo-$k$k-Mers.

Nikolai Romashchenko, Benjamin Linard, Eric Rivals, Fabio Pardi

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

2022

The Quest for Orthologs orthology benchmark service in 2022.

Yannis Nevers, Tamsin E. M. Jones, Dushyanth Jyothi, Bethan Yates, Meritxell Ferret, Laura Portell-Silva, Laia Codó, Salvatore Cosentino, Marina Marcet-Houben, Anna Vlasova, Laetitia Poidevin, Arnaud Kress, Mark Hickman, Emma Persson, Ivana Pilizota, Cristina Guijarro-Clarke, Adrian M. Altenhoff, Elspeth A. Bruford, Christophe Dessimoz, Ingo Ebersberger, David M. Emms, Toni Gabaldón, Natasha M. Glover, Yanhui Hu, Wataru Iwasaki, Odile Lecompte, Benjamin Linard, María J. Martín, David S. Roos, Erik Sonhammer, Paul D. Thomas, David Thybert, Klaas Vandepoele, Salvador Capella-Gutiérrez, Asier Gonzalez-Uriarte, Javier Garrayo-Ventas, Dmitry Repchevsky, Vicky Sundesha, Erik L. L. Sonnhammer

Nucleic Acids Res., 2022

2021

Rapid screening and detection of inter-type viral recombinants using phylo-k-mers.

Guillaume E. Scholz, Benjamin Linard, Nikolai Romashchenko, Eric Rivals, Fabio Pardi

Bioinform., 2021

PEWO: a collection of workflows to benchmark phylogenetic placement.

Benjamin Linard, Nikolai Romashchenko, Fabio Pardi, Eric Rivals

Bioinform., 2021

2019

OrthoInspector 3.0: open portal for comparative genomics.

Yannis Nevers, Arnaud Kress, Audrey Defosset, Raymond Ripp, Benjamin Linard, Julie Dawn Thompson, Olivier Poch, Odile Lecompte

Nucleic Acids Res., 2019

Rapid alignment-free phylogenetic identification of metagenomic sequences.

Benjamin Linard, Krister M. Swenson, Fabio Pardi

Bioinform., 2019

2015

OrthoInspector 2.0: Software and database updates.

Benjamin Linard, Alexis Allot, Raphael Schneider, Can Morel, Raymond Ripp, Marc Bigler, Julie Dawn Thompson, Olivier Poch, Odile Lecompte

Bioinform., 2015

2012

Development of evolutionary knowledge extraction methods and their application in biological complex systems. (Développement de méthodes évolutionnaires d'extraction de connaissance et application à des systèmes biologiques complexes).

Benjamin Linard

PhD thesis, 2012

KD4v: comprehensible knowledge discovery system for missense variant.

Tien-Dao Luu, Alin Rusu, Vincent Walter, Benjamin Linard, Laetitia Poidevin, Raymond Ripp, Luc Moulinier, Jean Muller, Wolfgang Raffelsberger, Nicolas Wicker, Odile Lecompte, Julie Dawn Thompson, Olivier Poch, Hoan Nguyen

Nucleic Acids Res., 2012

2011

OrthoInspector: comprehensive orthology analysis and visual exploration.

Benjamin Linard, Julie Dawn Thompson, Olivier Poch, Odile Lecompte

BMC Bioinform., 2011