Benjamin Goudey

According to our database, Benjamin Goudey authored at least 16 papers between 2007 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Integration of background knowledge for automatic detection of inconsistencies in gene ontology annotation.

Jiyu Chen, Benjamin Goudey, Nicholas Geard, Karin Verspoor

Bioinform., 2024

2023

Disease progression modelling of Alzheimer's disease using probabilistic principal components analysis.

Martin Saint-Jalmes, Victor Fedyashov, Daniel Beck, Timothy Baldwin, Noel G. Faux, Pierrick Bourgeat, Jurgen Fripp, Colin L. Masters, Benjamin Goudey

NeuroImage, September, 2023

2022

Exploring automatic inconsistency detection for literature-based gene ontology annotation.

Jiyu Chen, Benjamin Goudey, Justin Zobel, Nicholas Geard, Karin Verspoor

Bioinform., 2022

Propagation, detection and correction of errors using the sequence database network.

Benjamin Goudey, Nicholas Geard, Karin Verspoor, Justin Zobel

Briefings Bioinform., 2022

2021

Evaluation of consensus strategies for haplotype phasing.

Ziad Al Bkhetan, Gursharan Chana, Kotagiri Ramamohanarao, Karin Verspoor, Benjamin Goudey

Briefings Bioinform., 2021

eQTLHap: a tool for comprehensive eQTL analysis considering haplotypic and genotypic effects.

Ziad Al Bkhetan, Gursharan Chana, Cheng Soon Ong, Benjamin Goudey, Kotagiri Ramamohanarao

Briefings Bioinform., 2021

2019

Exploring effective approaches for haplotype block phasing.

Ziad Al Bkhetan, Justin Zobel, Adam Kowalczyk, Karin Verspoor, Benjamin Goudey

BMC Bioinform., 2019

2018

Predicting the Key Alzheimers Biomarkers in CSF from Plasma Analytes.

Christine Schieber, Annalisa Swan, Roslyn I. Hickson, Noel Faux, Benjamin Goudey

Proceedings of the AMIA 2018, 2018

A hybrid approach for automated mutation annotation of the extended human mutation landscape in scientific literature.

Antonio Jimeno-Yepes, Andrew D. MacKinlay, Natalie Gunn, Christine Schieber, Noel Faux, Matthew Downton, Benjamin Goudey, Richard L. Martin

Proceedings of the AMIA 2018, 2018

2017

A framework for optimal health worker allocation in under-resourced regions.

Benjamin Goudey, Roslyn I. Hickson, C. K. H. Hettiarachchige, M. Pore, C. Reeves, O. J. Smith, Annalisa Swan

IBM J. Res. Dev., 2017

2016

Information theoretic alignment free variant calling.

Justin Bedo, Benjamin Goudey, Jeremy Wazny, Ze-yu Zhou

PeerJ Prepr., 2016

2015

High performance computing enabling exhaustive analysis of higher order single nucleotide polymorphism interaction in Genome Wide Association Studies.

Benjamin Goudey, Mani Abedini, John L. Hopper, Michael Inouye, Enes Makalic, Daniel F. Schmidt, John Wagner, Zeyu Zhou, Justin Zobel, Matthias Reumann

Health Inf. Sci. Syst., 2015

2014

GWISFI: A universal GPU interface for exhaustive search of pairwise interactions in case-control GWAS in minutes.

Qiao Wang, Fan Shi, Andrew Kowalczyk, Richard M. Campbell, Benjamin Goudey, Dave Rawlinson, Aaron Harwood, Herman L. Ferrá, Adam Kowalczyk

Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

2012

Supercomputing enabling exhaustive statistical analysis of genome wide association study data: Preliminary results.

Matthias Reumann, Enes Makalic, Benjamin W. Goudey, Michael Inouye, Adrian Bickerstaffe, Minh Bui, Daniel J. Park, Miroslaw K. Kapuscinski, Daniel F. Schmidt, Zeyu Zhou, Guoqi Q. Qian, Justin Zobel, John Wagner, John L. Hopper

Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2012

2011

Replication of epistatic DNA loci in two case-control GWAS studies using OPE algorithm.

Benjamin Goudey, Qiao Wang, Dave Rawlinson, Armita Zarnegar, Eder Kikianty, John Markham, Geoff MacIntyre, Gad Abraham, Linda Stern, Michael Inouye, Izhak Haviv, Adam Kowalczyk

BMC Bioinform., 2011

2007

Exploring Extensions to Machine-learning based Gene Normalisation.

Benjamin Goudey, Nicola Stokes, David Martínez

Proceedings of the Australasian Language Technology Workshop, 2007