Benjamin Chain

According to our database, Benjamin Chain authored at least 10 papers between 2010 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2024

Data-driven Discovery of Biophysical T Cell Receptor Co-specificity Rules.

Andrew G. T. Pyo, Yuta Nagano, Martina Milighetti, James Henderson, Curtis G. Callan Jr., Benny Chain, Ned S. Wingreen, Andreas Tiffeau-Mayer

CoRR, 2024

Contrastive learning of T cell receptor representations.

Yuta Nagano, Andrew G. T. Pyo, Martina Milighetti, James Henderson, John Shawe-Taylor, Benny Chain, Andreas Tiffeau-Mayer

CoRR, 2024

2022

Executable network of SARS-CoV-2-host interaction predicts drug combination treatments.

Rowan S. M. Howell, Matthew A. Clarke, Ann-Kathrin Reuschl, Tianyi Chen, Sean Abbott-Imboden, Mervyn Singer, David M. Lowe, Clare L. Bennett, Benjamin Chain, Clare Jolly, Jasmin Fisher

npj Digit. Medicine, 2022

Corrigendum to: Decombinator V4: an improved AIRR-C compliant software package for T-cell receptor sequence annotation.

Thomas Peacock, James M. Heather, Tahel Ronel, Benny Chain

Bioinform., 2022

2021

Decombinator V4: an improved AIRR compliant-software package for T-cell receptor sequence annotation?

Thomas Peacock, James M. Heather, Tahel Ronel, Benny Chain

Bioinform., 2021

2020

Correlated Feature Selection with Extended Exclusive Group Lasso.

Yuxin Sun, Benny Chain, Samuel Kaski, John Shawe-Taylor

CoRR, 2020

2018

High-throughput sequencing of the T-cell receptor repertoire: pitfalls and opportunities.

James M. Heather, Mazlina Ismail, Theres Oakes, Benny Chain

Briefings Bioinform., 2018

2014

Tracking global changes induced in the CD4 T-cell receptor repertoire by immunization with a complex antigen using short stretches of CDR3 protein sequence.

Niclas Thomas, Katharine Best, Mattia Cinelli, Shlomit Reich-Zeliger, Hilah Gal, Eric Shifrut, Asaf Madi, Nir Friedman, John Shawe-Taylor, Benny Chain

Bioinform., 2014

2013

Decombinator: a tool for fast, efficient gene assignment in T-cell receptor sequences using a finite state machine.

Niclas Thomas, James M. Heather, Wilfred Ndifon, John Shawe-Taylor, Benjamin Chain

Bioinform., 2013

2010

Error, reproducibility and sensitivity : a pipeline for data processing of Agilent oligonucleotide expression arrays.

Benjamin Chain, Helen Bowen, John Hammond, Wilfried Posch, Jane Rasaiyaah, Jhen Tsang, Mahdad Noursadeghi

BMC Bioinform., 2010