Ben Glocker

Orcid: 0000-0002-4897-9356

Affiliations:
  • Imperial College, London, UK
  • Technical University Munich, Germany


According to our database1, Ben Glocker authored at least 248 papers between 2007 and 2024.

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Bibliography

2024
Confidence-Aware Paced-Curriculum Learning by Label Smoothing for Surgical Scene Understanding.
IEEE Trans Autom. Sci. Eng., July, 2024

mammo-net.
Dataset, February, 2024

A geometric approach to robust medical image segmentation.
Medical Image Anal., 2024

Rethinking Fair Representation Learning for Performance-Sensitive Tasks.
CoRR, 2024

Radio-opaque artefacts in digital mammography: automatic detection and analysis of downstream effects.
CoRR, 2024

Robust image representations with counterfactual contrastive learning.
CoRR, 2024

Latent 3D Brain MRI Counterfactual.
CoRR, 2024

SharkTrack: an accurate, generalisable software for streamlining shark and ray underwater video analysis.
CoRR, 2024

Identifiable Object-Centric Representation Learning via Probabilistic Slot Attention.
CoRR, 2024

Demystifying Variational Diffusion Models.
CoRR, 2024

Unsupervised Similarity Learning for Image Registration with Energy-Based Models.
Proceedings of the Biomedical Image Registration - 11th International Workshop, 2024

Mitigating Attribute Amplification in Counterfactual Image Generation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2024, 2024

Counterfactual Contrastive Learning: Robust Representations via Causal Image Synthesis.
Proceedings of the Data Engineering in Medical Imaging - Second MICCAI Workshop, 2024

Quantifying the Impact of Population Shift Across Age and Sex for Abdominal Organ Segmentation.
Proceedings of the Ethics and Fairness in Medical Imaging, 2024

Average Calibration Error: A Differentiable Loss for Improved Reliability in Image Segmentation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2024, 2024

The Importance of Model Inspection for Better Understanding Performance Characteristics of Graph Neural Networks.
Proceedings of the IEEE International Symposium on Biomedical Imaging, 2024

Image-To-Tree with Recursive Prompting.
Proceedings of the IEEE International Symposium on Biomedical Imaging, 2024

Grounded Object-Centric Learning.
Proceedings of the Twelfth International Conference on Learning Representations, 2024

2023
Joint Optimization of Class-Specific Training- and Test-Time Data Augmentation in Segmentation.
IEEE Trans. Medical Imaging, November, 2023

Simple Synthetic Angiography 0.1.
Dataset, November, 2023

Paced-curriculum distillation with prediction and label uncertainty for image segmentation.
Int. J. Comput. Assist. Radiol. Surg., October, 2023

Context Label Learning: Improving Background Class Representations in Semantic Segmentation.
IEEE Trans. Medical Imaging, June, 2023

Data synthesis and adversarial networks: A review and meta-analysis in cancer imaging.
Medical Image Anal., 2023

CrossMoDA 2021 challenge: Benchmark of cross-modality domain adaptation techniques for vestibular schwannoma and cochlea segmentation.
Medical Image Anal., 2023

FUTURE-AI: International consensus guideline for trustworthy and deployable artificial intelligence in healthcare.
CoRR, 2023

No Fair Lunch: A Causal Perspective on Dataset Bias in Machine Learning for Medical Imaging.
CoRR, 2023

Unsupervised Conditional Slot Attention for Object Centric Learning.
CoRR, 2023

A Causal Ordering Prior for Unsupervised Representation Learning.
CoRR, 2023

Understanding metric-related pitfalls in image analysis validation.
CoRR, 2023

Image To Tree with Recursive Prompting.
CoRR, 2023

Robust semi-supervised segmentation with timestep ensembling diffusion models.
Proceedings of the Machine Learning for Health, 2023

Hierarchical Compositionality in Hyperbolic Space for Robust Medical Image Segmentation.
Proceedings of the Domain Adaptation and Representation Transfer - 5th MICCAI Workshop, 2023

A Sheaf Theoretic Perspective for Robust Prostate Segmentation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

The Role of Subgroup Separability in Group-Fair Medical Image Classification.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

Robustness Stress Testing in Medical Image Classification.
Proceedings of the Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, 2023

High Fidelity Image Counterfactuals with Probabilistic Causal Models.
Proceedings of the International Conference on Machine Learning, 2023

Measuring axiomatic soundness of counterfactual image models.
Proceedings of the Eleventh International Conference on Learning Representations, 2023

Distance Matters For Improving Performance Estimation Under Covariate Shift.
Proceedings of the IEEE/CVF International Conference on Computer Vision, 2023

What's fair is... fair? Presenting JustEFAB, an ethical framework for operationalizing medical ethics and social justice in the integration of clinical machine learning: JustEFAB.
Proceedings of the 2023 ACM Conference on Fairness, Accountability, and Transparency, 2023

Topology Preserving Compositionality for Robust Medical Image Segmentation.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2023

Robust Hierarchical Symbolic Explanations in Hyperbolic Space for Image Classification.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2023

Analysing Race and Sex Bias in Brain Age Prediction.
Proceedings of the Clinical Image-Based Procedures, Fairness of AI in Medical Imaging, and Ethical and Philosophical Issues in Medical Imaging, 2023

2022
Structured Uncertainty in the Observation Space of Variational Autoencoders.
Trans. Mach. Learn. Res., 2022

Failure Detection in Medical Image Classification: A Reality Check and Benchmarking Testbed.
Trans. Mach. Learn. Res., 2022

Author Correction: Federated deep learning for detecting COVID-19 lung abnormalities in CT: a privacy-preserving multinational validation study.
npj Digit. Medicine, 2022

Atlas-ISTN: Joint segmentation, registration and atlas construction with image-and-spatial transformer networks.
Medical Image Anal., 2022

Visual Debates.
CoRR, 2022

Risk of Bias in Chest X-ray Foundation Models.
CoRR, 2022

GLANCE: Global to Local Architecture-Neutral Concept-based Explanations.
CoRR, 2022

Hierarchical Symbolic Reasoning in Hyperbolic Space for Deep Discriminative Models.
CoRR, 2022

Distributional Gaussian Processes Layers for Out-of-Distribution Detection.
CoRR, 2022

Metrics reloaded: Pitfalls and recommendations for image analysis validation.
CoRR, 2022

Investigating underdiagnosis of AI algorithms in the presence of multiple sources of dataset bias.
CoRR, 2022

CrossMoDA 2021 challenge: Benchmark of Cross-Modality Domain Adaptation techniques for Vestibular Schwnannoma and Cochlea Segmentation.
CoRR, 2022

Analysing the effectiveness of a generative model for semi-supervised medical image segmentation.
Proceedings of the Machine Learning for Health, 2022

Vector Quantisation for Robust Segmentation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

Automatic Lesion Analysis for Increased Efficiency in Outcome Prediction of Traumatic Brain Injury.
Proceedings of the Machine Learning in Clinical Neuroimaging - 5th International Workshop, 2022

Estimating Model Performance Under Domain Shifts with Class-Specific Confidence Scores.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

A Comparative Study of Graph Neural Networks for Shape Classification in Neuroimaging.
Proceedings of the Geometric Deep Learning in Medical Image Analysis, 2022

Deep Structural Causal Shape Models.
Proceedings of the Computer Vision - ECCV 2022 Workshops, 2022

Frequency Dropout: Feature-Level Regularization via Randomized Filtering.
Proceedings of the Computer Vision - ECCV 2022 Workshops, 2022

A variational Bayesian method for similarity learning in non-rigid image registration.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2022

2021
AutoImplant 2020-First MICCAI Challenge on Automatic Cranial Implant Design.
IEEE Trans. Medical Imaging, 2021

Analyzing Overfitting Under Class Imbalance in Neural Networks for Image Segmentation.
IEEE Trans. Medical Imaging, 2021

Federated deep learning for detecting COVID-19 lung abnormalities in CT: a privacy-preserving multinational validation study.
npj Digit. Medicine, 2021

Adversarial interference and its mitigations in privacy-preserving collaborative machine learning.
Nat. Mach. Intell., 2021

VerSe: A Vertebrae labelling and segmentation benchmark for multi-detector CT images.
Medical Image Anal., 2021

Normative ascent with local gaussians for unsupervised lesion detection.
Medical Image Anal., 2021

Algorithmic encoding of protected characteristics and its implications on disparities across subgroups.
CoRR, 2021

Uncertainty quantification in non-rigid image registration via stochastic gradient Markov chain Monte Carlo.
CoRR, 2021

Is MC Dropout Bayesian?
CoRR, 2021

Class-Distribution-Aware Calibration for Long-Tailed Visual Recognition.
CoRR, 2021

Active label cleaning: Improving dataset quality under resource constraints.
CoRR, 2021

Bayesian analysis of the prevalence bias: learning and predicting from imbalanced data.
CoRR, 2021

A Review of Generative Adversarial Networks in Cancer Imaging: New Applications, New Solutions.
CoRR, 2021

Common Limitations of Image Processing Metrics: A Picture Story.
CoRR, 2021

Multi-scale Hybrid Transformer Networks: Application to Prostate Disease Classification.
Proceedings of the Multimodal Learning for Clinical Decision Support, 2021

Multiple Instance Learning with Auxiliary Task Weighting for Multiple Myeloma Classification.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

DeepMCAT: Large-Scale Deep Clustering for Medical Image Categorization.
Proceedings of the Deep Generative Models, and Data Augmentation, Labelling, and Imperfections, 2021

Transductive Image Segmentation: Self-training and Effect of Uncertainty Estimation.
Proceedings of the Domain Adaptation and Representation Transfer, and Affordable Healthcare and AI for Resource Diverse Global Health, 2021

Learning from Partially Overlapping Labels: Image Segmentation Under Annotation Shift.
Proceedings of the Domain Adaptation and Representation Transfer, and Affordable Healthcare and AI for Resource Diverse Global Health, 2021

Detecting Hypo-plastic Left Heart Syndrome in Fetal Ultrasound via Disease-Specific Atlas Maps.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

Confidence-Based Out-of-Distribution Detection: A Comparative Study and Analysis.
Proceedings of the Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, and Perinatal Imaging, Placental and Preterm Image Analysis, 2021

The Effect of the Loss on Generalization: Empirical Study on Synthetic Lung Nodule Data.
Proceedings of the Interpretability of Machine Intelligence in Medical Image Computing, and Topological Data Analysis and Its Applications for Medical Data, 2021

The Pitfalls of Sample Selection: A Case Study on Lung Nodule Classification.
Proceedings of the Predictive Intelligence in Medicine - 4th International Workshop, 2021

Patient-Specific 3d Cellular Automata Nodule Growth Synthesis In Lung Cancer Without The Need Of External Data.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

Distributional Gaussian Process Layers for Outlier Detection in Image Segmentation.
Proceedings of the Information Processing in Medical Imaging, 2021

Spatially Varying Label Smoothing: Capturing Uncertainty from Expert Annotations.
Proceedings of the Information Processing in Medical Imaging, 2021

Universal Adversarial Robustness of Texture and Shape-Biased Models.
Proceedings of the 2021 IEEE International Conference on Image Processing, 2021

2020
Post-DAE: Anatomically Plausible Segmentation via Post-Processing With Denoising Autoencoders.
IEEE Trans. Medical Imaging, 2020

Unpaired Multi-Modal Segmentation via Knowledge Distillation.
IEEE Trans. Medical Imaging, 2020

Hierarchical Gaussian Processes with Wasserstein-2 Kernels.
CoRR, 2020

Bayesian Sampling Bias Correction: Training with the Right Loss Function.
CoRR, 2020

VerSe: A Vertebrae Labelling and Segmentation Benchmark for Multi-detector CT Images.
CoRR, 2020

Deep Structural Causal Models for Tractable Counterfactual Inference.
Proceedings of the Advances in Neural Information Processing Systems 33: Annual Conference on Neural Information Processing Systems 2020, 2020

Stochastic Segmentation Networks: Modelling Spatially Correlated Aleatoric Uncertainty.
Proceedings of the Advances in Neural Information Processing Systems 33: Annual Conference on Neural Information Processing Systems 2020, 2020

Deep Generative Model-Based Quality Control for Cardiac MRI Segmentation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Image-Level Harmonization of Multi-site Data Using Image-and-Spatial Transformer Networks.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Self-supervised Skull Reconstruction in Brain CT Images with Decompressive Craniectomy.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Cranial Implant Design via Virtual Craniectomy with Shape Priors.
Proceedings of the Towards the Automatization of Cranial Implant Design in Cranioplasty, 2020

Image Registration via Stochastic Gradient Markov Chain Monte Carlo.
Proceedings of the Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, and Graphs in Biomedical Image Analysis, 2020

2019
Learning-Based Quality Control for Cardiac MR Images.
IEEE Trans. Medical Imaging, 2019

TeTrIS: Template Transformer Networks for Image Segmentation With Shape Priors.
IEEE Trans. Medical Imaging, 2019

Quantitative error prediction of medical image registration using regression forests.
Medical Image Anal., 2019

Attention gated networks: Learning to leverage salient regions in medical images.
Medical Image Anal., 2019

Evaluating reinforcement learning agents for anatomical landmark detection.
Medical Image Anal., 2019

Morpho-MNIST: Quantitative Assessment and Diagnostics for Representation Learning.
J. Mach. Learn. Res., 2019

Special Issue on Machine Vision.
Int. J. Comput. Vis., 2019

Causality matters in medical imaging.
CoRR, 2019

Universal Adversarial Perturbations to Understand Robustness of Texture vs. Shape-biased Training.
CoRR, 2019

Vertebrae Detection and Localization in CT with Two-Stage CNNs and Dense Annotations.
CoRR, 2019

Machine Learning with Multi-Site Imaging Data: An Empirical Study on the Impact of Scanner Effects.
CoRR, 2019

Needles in Haystacks: On Classifying Tiny Objects in Large Images.
CoRR, 2019

Is Texture Predictive for Age and Sex in Brain MRI?
CoRR, 2019

Medical Imaging with Deep Learning: MIDL 2019 - Extended Abstract Track.
CoRR, 2019

Automated Quality Control in Image Segmentation: Application to the UK Biobank Cardiac MR Imaging Study.
CoRR, 2019

PnP-AdaNet: Plug-and-Play Adversarial Domain Adaptation Network at Unpaired Cross-Modality Cardiac Segmentation.
IEEE Access, 2019

Domain Generalization via Model-Agnostic Learning of Semantic Features.
Proceedings of the Advances in Neural Information Processing Systems 32: Annual Conference on Neural Information Processing Systems 2019, 2019

Improving RetinaNet for CT Lesion Detection with Dense Masks from Weak RECIST Labels.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

Overfitting of Neural Nets Under Class Imbalance: Analysis and Improvements for Segmentation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

Image-and-Spatial Transformer Networks for Structure-Guided Image Registration.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

Unsupervised Lesion Detection with Locally Gaussian Approximation.
Proceedings of the Machine Learning in Medical Imaging - 10th International Workshop, 2019

Controlling Meshes via Curvature: Spin Transformations for Pose-Invariant Shape Processing.
Proceedings of the Information Processing in Medical Imaging, 2019

Graph Convolutional Gaussian Processes.
Proceedings of the 36th International Conference on Machine Learning, 2019

TBI Lesion Segmentation in Head CT: Impact of Preprocessing and Data Augmentation.
Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2019

2018
Anatomically Constrained Neural Networks (ACNNs): Application to Cardiac Image Enhancement and Segmentation.
IEEE Trans. Medical Imaging, 2018

3-D Reconstruction in Canonical Co-Ordinate Space From Arbitrarily Oriented 2-D Images.
IEEE Trans. Medical Imaging, 2018

Metric learning with spectral graph convolutions on brain connectivity networks.
NeuroImage, 2018

Reconstructing subject-specific effect maps.
NeuroImage, 2018

Disease prediction using graph convolutional networks: Application to Autism Spectrum Disorder and Alzheimer's disease.
Medical Image Anal., 2018

PnP-AdaNet: Plug-and-Play Adversarial Domain Adaptation Network with a Benchmark at Cross-modality Cardiac Segmentation.
CoRR, 2018

Towards continual learning in medical imaging.
CoRR, 2018

High-Resolution Mammogram Synthesis using Progressive Generative Adversarial Networks.
CoRR, 2018

Deep Generative Models in the Real-World: An Open Challenge from Medical Imaging.
CoRR, 2018

NeuroNet: Fast and Robust Reproduction of Multiple Brain Image Segmentation Pipelines.
CoRR, 2018

Disease Prediction using Graph Convolutional Networks: Application to Autism Spectrum Disorder and Alzheimer's Disease.
CoRR, 2018

Domain Adaptation for MRI Organ Segmentation using Reverse Classification Accuracy.
CoRR, 2018

Attention-Gated Networks for Improving Ultrasound Scan Plane Detection.
CoRR, 2018

Attention U-Net: Learning Where to Look for the Pancreas.
CoRR, 2018

Learning-Based Quality Control for Cardiac MR Images.
CoRR, 2018

Multi-modal Learning from Unpaired Images: Application to Multi-organ Segmentation in CT and MRI.
Proceedings of the 2018 IEEE Winter Conference on Applications of Computer Vision, 2018

Small Organ Segmentation in Whole-Body MRI Using a Two-Stage FCN and Weighting Schemes.
Proceedings of the Machine Learning in Medical Imaging - 9th International Workshop, 2018


Computing CNN Loss and Gradients for Pose Estimation with Riemannian Geometry.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

On the Adaptability of Unsupervised CNN-Based Deformable Image Registration to Unseen Image Domains.
Proceedings of the Machine Learning in Medical Imaging - 9th International Workshop, 2018

Nonparametric Density Flows for MRI Intensity Normalisation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

Graph Saliency Maps Through Spectral Convolutional Networks: Application to Sex Classification with Brain Connectivity.
Proceedings of the Graphs in Biomedical Image Analysis - and - Integrating Medical Imaging and Non-Imaging Modalities, 2018

Automatic View Planning with Multi-scale Deep Reinforcement Learning Agents.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

Semi-Supervised Learning via Compact Latent Space Clustering.
Proceedings of the 35th International Conference on Machine Learning, 2018

2017
Unified Tracking and Shape Estimation for Concentric Tube Robots.
IEEE Trans. Robotics, 2017

Reverse Classification Accuracy: Predicting Segmentation Performance in the Absence of Ground Truth.
IEEE Trans. Medical Imaging, 2017

Stratified Decision Forests for Accurate Anatomical Landmark Localization in Cardiac Images.
IEEE Trans. Medical Imaging, 2017

Supervoxel classification forests for estimating pairwise image correspondences.
Pattern Recognit., 2017

A flexible graphical model for multi-modal parcellation of the cortex.
NeuroImage, 2017

Learning and combining image neighborhoods using random forests for neonatal brain disease classification.
Medical Image Anal., 2017

Evaluation and comparison of 3D intervertebral disc localization and segmentation methods for 3D T2 MR data: A grand challenge.
Medical Image Anal., 2017

Robust guidewire tracking under large deformations combining segment-like features (SEGlets).
Medical Image Anal., 2017

ISLES 2015 - A public evaluation benchmark for ischemic stroke lesion segmentation from multispectral MRI.
Medical Image Anal., 2017

Efficient multi-scale 3D CNN with fully connected CRF for accurate brain lesion segmentation.
Medical Image Anal., 2017

DLTK: State of the Art Reference Implementations for Deep Learning on Medical Images.
CoRR, 2017

Implicit Weight Uncertainty in Neural Networks.
CoRR, 2017

Human-level CMR image analysis with deep fully convolutional networks.
CoRR, 2017

3D Reconstruction in Canonical Co-ordinate Space from Arbitrarily Oriented 2D Images.
CoRR, 2017

Anatomically Constrained Neural Networks (ACNN): Application to Cardiac Image Enhancement and Segmentation.
CoRR, 2017

SubCMap: Subject and Condition Specific Effect Maps.
CoRR, 2017

Predicting Slice-to-Volume Transformation in Presence of Arbitrary Subject Motion.
CoRR, 2017

Automatic Quality Control of Cardiac MRI Segmentation in Large-Scale Population Imaging.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017

Spectral Graph Convolutions for Population-Based Disease Prediction.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017

Distance Metric Learning Using Graph Convolutional Networks: Application to Functional Brain Networks.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017

Joint Supervoxel Classification Forest for Weakly-Supervised Organ Segmentation.
Proceedings of the Machine Learning in Medical Imaging - 8th International Workshop, 2017

Ensembles of Multiple Models and Architectures for Robust Brain Tumour Segmentation.
Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2017

Predicting Slice-to-Volume Transformation in Presence of Arbitrary Subject Motion.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017

Automatic Localization of the Lumbar Vertebral Landmarks in CT Images with Context Features.
Proceedings of the Computational Methods and Clinical Applications in Musculoskeletal Imaging, 2017

Semi-supervised Learning for Network-Based Cardiac MR Image Segmentation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017

Unsupervised Domain Adaptation in Brain Lesion Segmentation with Adversarial Networks.
Proceedings of the Information Processing in Medical Imaging, 2017

Efficient variational Bayesian neural network ensembles for outlier detection.
Proceedings of the 5th International Conference on Learning Representations, 2017

Learning-Based Heart Coverage Estimation for Short-Axis Cine Cardiac MR Images.
Proceedings of the Functional Imaging and Modelling of the Heart, 2017

2016
Learning clinically useful information from images: Past, present and future.
Medical Image Anal., 2016

(Hyper)-graphical models in biomedical image analysis.
Medical Image Anal., 2016

Note Special Issue on Discrete Graphical Models in Biomedical Image Analysis.
Medical Image Anal., 2016

ElasticFusion: Real-time dense SLAM and light source estimation.
Int. J. Robotics Res., 2016

Fast Fully Automatic Segmentation of the Severely Abnormal Human Right Ventricle from Cardiovascular Magnetic Resonance Images Using a Multi-Scale 3D Convolutional Neural Network.
Proceedings of the 12th International Conference on Signal-Image Technology & Internet-Based Systems, 2016

Accuracy Estimation for Medical Image Registration Using Regression Forests.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016

A Semi-supervised Large Margin Algorithm for White Matter Hyperintensity Segmentation.
Proceedings of the Machine Learning in Medical Imaging - 7th International Workshop, 2016

GraMPa: Graph-Based Multi-modal Parcellation of the Cortex Using Fusion Moves.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016

Crowd-Algorithm Collaboration for Large-Scale Endoscopic Image Annotation with Confidence.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016

Constructing Subject- and Disease-Specific Effect Maps: Application to Neurodegenerative Diseases.
Proceedings of the Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging, 2016

DeepMedic for Brain Tumor Segmentation.
Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2016

Correction of Fat-Water Swaps in Dixon MRI.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016

Fast Fully Automatic Segmentation of the Human Placenta from Motion Corrupted MRI.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016

Discrete Optimisation for Group-Wise Cortical Surface Atlasing.
Proceedings of the 2016 IEEE Conference on Computer Vision and Pattern Recognition Workshops, 2016

2015
Real-Time RGB-D Camera Relocalization via Randomized Ferns for Keyframe Encoding.
IEEE Trans. Vis. Comput. Graph., 2015

The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS).
IEEE Trans. Medical Imaging, 2015

Motion Segmentation of Truncated Signed Distance Function Based Volumetric Surfaces.
Proceedings of the 2015 IEEE Winter Conference on Applications of Computer Vision, 2015

ElasticFusion: Dense SLAM Without A Pose Graph.
Proceedings of the Robotics: Science and Systems XI, Sapienza University of Rome, 2015

Learning and Combining Image Similarities for Neonatal Brain Population Studies.
Proceedings of the Machine Learning in Medical Imaging - 6th International Workshop, 2015

Uncertainty-Driven Forest Predictors for Vertebra Localization and Segmentation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015, 2015

Learning to detect and track cells for quantitative analysis of time-lapse microscopic image sequences.
Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015

Automatic Brain Localization in Fetal MRI Using Superpixel Graphs.
Proceedings of the Machine Learning Meets Medical Imaging - First International Workshop, 2015

2014
Encoding atlases by randomized classification forests for efficient multi-atlas label propagation.
Medical Image Anal., 2014

Classifier-Based Multi-atlas Label Propagation with Test-Specific Atlas Weighting for Correspondence-Free Scenarios.
Proceedings of the Medical Computer Vision: Algorithms for Big Data, 2014

Geodesic Patch-Based Segmentation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

Quantifying Progression of Multiple Sclerosis via Classification of Depth Videos.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

Robust Registration of Longitudinal Spine CT.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

Dense planar SLAM.
Proceedings of the IEEE International Symposium on Mixed and Augmented Reality, 2014

Multi-output Learning for Camera Relocalization.
Proceedings of the 2014 IEEE Conference on Computer Vision and Pattern Recognition, 2014

2013
Interventional Tool Tracking Using Discrete Optimization.
IEEE Trans. Medical Imaging, 2013

WESD-Weighted Spectral Distance for Measuring Shape Dissimilarity.
IEEE Trans. Pattern Anal. Mach. Intell., 2013

Neighbourhood approximation using randomized forests.
Medical Image Anal., 2013

Atlas Encoding by Randomized Forests for Efficient Label Propagation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Modality Propagation: Coherent Synthesis of Subject-Specific Scans with Data-Driven Regularization.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Is Synthesizing MRI Contrast Useful for Inter-modality Analysis?
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Vertebrae Localization in Pathological Spine CT via Dense Classification from Sparse Annotations.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Real-time RGB-D camera relocalization.
Proceedings of the IEEE International Symposium on Mixed and Augmented Reality, 2013

Scene Coordinate Regression Forests for Camera Relocalization in RGB-D Images.
Proceedings of the 2013 IEEE Conference on Computer Vision and Pattern Recognition, 2013

2012
Discriminative Segmentation-Based Evaluation Through Shape Dissimilarity.
IEEE Trans. Medical Imaging, 2012

Mediastinal atlas creation from 3-D chest computed tomography images: Application to automated detection and station mapping of lymph nodes.
Medical Image Anal., 2012

Decision Forests for Tissue-Specific Segmentation of High-Grade Gliomas in Multi-channel MR.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

Neighbourhood Approximation Forests.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

Automatic Localization and Identification of Vertebrae in Arbitrary Field-of-View CT Scans.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

Joint Classification-Regression Forests for Spatially Structured Multi-object Segmentation.
Proceedings of the Computer Vision - ECCV 2012, 2012

2011
Random fields for image registration.
PhD thesis, 2011

Evaluation of Registration Methods on Thoracic CT: The EMPIRE10 Challenge.
IEEE Trans. Medical Imaging, 2011

Fast Multiple Organ Detection and Localization in Whole-Body MR Dixon Sequences.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011, 2011

2010
Linear intensity-based image registration by Markov random fields and discrete optimization.
Medical Image Anal., 2010

Markov random field optimization for intensity-based 2D-3D registration.
Proceedings of the Medical Imaging 2010: Image Processing, 2010

Simultaneous Geometric - Iconic Registration.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2010

Needle tracking through higher-order MRF optimization.
Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010

TriangleFlow: Optical Flow with Triangulation-Based Higher-Order Likelihoods.
Proceedings of the Computer Vision, 2010

2009
Sphere extraction in MR images with application to whole-body MRI.
Proceedings of the Medical Imaging 2009: Image Processing, 2009

Graphical Models and Deformable Diffeomorphic Population Registration Using Global and Local Metrics.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009

Probabilistic Region Matching in Narrow-Band Endoscopy for Targeted Optical Biopsy.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009

Approximated Curvature Penalty in Non-rigid Registration Using Pairwise MRFs.
Proceedings of the Advances in Visual Computing, 5th International Symposium, 2009

Linear Image Registration Through MRF Optimization.
Proceedings of the 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28, 2009

Dense Registration with Deformation Priors.
Proceedings of the Information Processing in Medical Imaging, 2009

Discrete tracking of parametrized curves.
Proceedings of the 2009 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2009), 2009

MRI Composing for Whole Body Imaging.
Proceedings of the Bildverarbeitung für die Medizin 2009: Algorithmen - Systeme, 2009

2008
Dense image registration through MRFs and efficient linear programming.
Medical Image Anal., 2008

Real-time respiratory motion tracking: roadmap correction for hepatic artery catheterizations.
Proceedings of the Medical Imaging 2008: Visualization, 2008

Deformable Mosaicing for Whole-Body MRI.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2008

Computing minimal deformations: application to construction of statistical shape models.
Proceedings of the 2008 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2008), 2008

Adaptive parametrization of multivariate B-splines for image registration.
Proceedings of the 2008 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2008), 2008

Optical flow estimation with uncertainties through dynamic MRFs.
Proceedings of the 2008 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2008), 2008

Effiziente nichtlineare Registrierung mittels diskreter Optimierung.
Proceedings of the Bildverarbeitung für die Medizin 2008, 2008

2007
Primal/Dual Linear Programming and Statistical Atlases for Cartilage Segmentation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

Towards a computer-aided diagnosis system for colon motility dysfunctions.
Proceedings of the Medical Imaging 2007: Computer-Aided Diagnosis, San Diego, 2007

4D Ventricular Segmentation and Wall Motion Estimation Using Efficient Discrete Optimization.
Proceedings of the Advances in Visual Computing, Third International Symposium, 2007

Inter and Intra-modal Deformable Registration: Continuous Deformations Meet Efficient Optimal Linear Programming.
Proceedings of the Information Processing in Medical Imaging, 2007


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