Bei Wang

Jeff M. Phillips

IEEE Trans. Vis. Comput. Graph., January, 2025

MSz: An Efficient Parallel Algorithm for Correcting Morse-Smale Segmentations in Error-Bounded Lossy Compressors.

[BibT_eX]

[DOI]

IEEE Trans. Vis. Comput. Graph., January, 2025

Distributed Augmentation, Hypersweeps, and Branch Decomposition of Contour Trees for Scientific Exploration.

[BibT_eX]

[DOI]

IEEE Trans. Vis. Comput. Graph., January, 2025

2024

Labeled interleaving distance for Reeb graphs.

[BibT_eX]

[DOI]

Fangfei Lan

Salman Parsa

J. Appl. Comput. Topol., December, 2024

Hypergraph co-optimal transport: metric and categorical properties.

[BibT_eX]

[DOI]

J. Appl. Comput. Topol., October, 2024

VERB: Visualizing and Interpreting Bias Mitigation Techniques Geometrically for Word Representations.

[BibT_eX]

[DOI]

Chin-Chia Michael Yeh

Junpeng Wang

Wei Zhang

ACM Trans. Interact. Intell. Syst., March, 2024

TopoSZ: Preserving Topology in Error-Bounded Lossy Compression.

[BibT_eX]

[DOI]

IEEE Trans. Vis. Comput. Graph., January, 2024

TROPHY: A Topologically Robust Physics-Informed Tracking Framework for Tropical Cyclones.

[BibT_eX]

[DOI]

IEEE Trans. Vis. Comput. Graph., January, 2024

Multi-Tier Preservation of Discrete Morse Smale Complexes in Error-Bounded Lossy Compression.

[BibT_eX]

[DOI]

CoRR, 2024

Harmonic Chain Barcode and Stability.

[BibT_eX]

[DOI]

Salman Parsa

CoRR, 2024

Position Paper: Challenges and Opportunities in Topological Deep Learning.

[BibT_eX]

[DOI]

CoRR, 2024

Measure Theoretic Reeb Graphs and Reeb Spaces.

[BibT_eX]

[DOI]

Qingsong Wang

Guanquan Ma

CoRR, 2024

Generating Euler Diagrams Through Combinatorial Optimization.

[BibT_eX]

[DOI]

Comput. Graph. Forum, 2024

Topological Characterization and Uncertainty Visualization of Atmospheric Rivers.

[BibT_eX]

[DOI]

Comput. Graph. Forum, 2024

Critical Point Extraction from Multivariate Functional Approximation.

[BibT_eX]

[DOI]

Proceedings of the IEEE Topological Data Analysis and Visualization, 2024

Exploring Visualization for Fairness in AI Education.

[BibT_eX]

[DOI]

Proceedings of the 17th IEEE Pacific Visualization Conference, 2024

Interactive Visualization of Time-Varying Flow Fields Using Particle Tracing Neural Networks.

[BibT_eX]

[DOI]

Proceedings of the 17th IEEE Pacific Visualization Conference, 2024

In-Context Example Ordering Guided by Label Distributions.

[BibT_eX]

[DOI]

Proceedings of the Findings of the Association for Computational Linguistics: NAACL 2024, 2024

Position: Topological Deep Learning is the New Frontier for Relational Learning.

[BibT_eX]

[DOI]

Proceedings of the Forty-first International Conference on Machine Learning, 2024

EulerMerge: Simplifying Euler Diagrams Through Set Merges.

[BibT_eX]

[DOI]

Proceedings of the Diagrammatic Representation and Inference, 2024

Measure-Theoretic Reeb Graphs and Reeb Spaces.

[BibT_eX]

[DOI]

Qingsong Wang

Guanqun Ma

Proceedings of the 40th International Symposium on Computational Geometry, 2024

2023

Multilevel Robustness for 2D Vector Field Feature Tracking, Selection and Comparison.

[BibT_eX]

[DOI]

Comput. Graph. Forum, September, 2023

Geometry-Aware Merge Tree Comparisons for Time-Varying Data With Interleaving Distances.

[BibT_eX]

[DOI]

IEEE Trans. Vis. Comput. Graph., August, 2023

Topological Simplifications of Hypergraphs.

[BibT_eX]

[DOI]

IEEE Trans. Vis. Comput. Graph., July, 2023

TopoBERT: Exploring the topology of fine-tuned word representations.

[BibT_eX]

[DOI]

Inf. Vis., July, 2023

Topological Data Analysis and Applications (Dagstuhl Seminar 23192).

[BibT_eX]

[DOI]

Ulrich Bauer

Vijay Natarajan

Dagstuhl Reports, 2023

Bounding the Interleaving Distance for Geometric Graphs with a Loss Function.

[BibT_eX]

[DOI]

CoRR, 2023

Flexible and Probabilistic Topology Tracking with Partial Optimal Transport.

[BibT_eX]

[DOI]

CoRR, 2023

Comparing Morse Complexes Using Optimal Transport: An Experimental Study.

[BibT_eX]

[DOI]

Proceedings of the 2023 IEEE Visualization and Visual Analytics (VIS), 2023

Visualizing and Analyzing the Topology of Neuron Activations in Deep Adversarial Training.

[BibT_eX]

[DOI]

Proceedings of the Topological, 2023

Exploring Gradient Oscillation in Deep Neural Network Training.

[BibT_eX]

[DOI]

Proceedings of the 59th Annual Allerton Conference on Communication, 2023

Experimental Observations of the Topology of Convolutional Neural Network Activations.

[BibT_eX]

[DOI]

Proceedings of the Thirty-Seventh AAAI Conference on Artificial Intelligence, 2023

2022

Local bilinear computation of Jacobi sets.

[BibT_eX]

[DOI]

Vis. Comput., 2022

Uncertainty Visualization of 2D Morse Complex Ensembles Using Statistical Summary Maps.

[BibT_eX]

[DOI]

IEEE Trans. Vis. Comput. Graph., 2022

Discrete Stratified Morse Theory.

[BibT_eX]

[DOI]

Kevin P. Knudson

Discret. Comput. Geom., 2022

Reduced Connectivity for Local Bilinear Jacobi Sets.

[BibT_eX]

[DOI]

CoRR, 2022

Untangling Force-Directed Layouts Using Persistent Homology.

[BibT_eX]

[DOI]

Bhavana Doppalapudi

CoRR, 2022

The SVD of Convolutional Weights: A CNN Interpretability Framework.

[BibT_eX]

[DOI]

CoRR, 2022

Humans as Mitigators of Biases in Risk Prediction via Field Studies.

[BibT_eX]

[DOI]

Arul Mishra

Himanshu Mishra

Proceedings of the IEEE International Conference on Big Data, 2022

Uncertainty Visualization for Graph Coarsening.

[BibT_eX]

[DOI]

Proceedings of the IEEE International Conference on Big Data, 2022

2021

Probabilistic convergence and stability of random mapper graphs.

[BibT_eX]

[DOI]

J. Appl. Comput. Topol., 2021

Sheaf-Theoretic Stratification Learning from Geometric and Topological Perspectives.

[BibT_eX]

[DOI]

Adam Brown

Discret. Comput. Geom., 2021

Statistical Rendering for Visualization of Red Sea Eddy Simulation Data.

[BibT_eX]

[DOI]

CoRR, 2021

Stitch Fix for Mapper and Information Gains.

[BibT_eX]

[DOI]

CoRR, 2021

VERB: Visualizing and Interpreting Bias Mitigation Techniques for Word Representations.

[BibT_eX]

[DOI]

Chin-Chia Michael Yeh

Junpeng Wang

Wei Zhang

CoRR, 2021

Sketching Merge Trees.

[BibT_eX]

[DOI]

Mingzhe Li

Sourabh Palande

CoRR, 2021

Scalar Field Comparison with Topological Descriptors: Properties and Applications for Scientific Visualization.

[BibT_eX]

[DOI]

Lin Yan

Talha Bin Masood

Comput. Graph. Forum, 2021

TopoAct: Visually Exploring the Shape of Activations in Deep Learning.

[BibT_eX]

[DOI]

Comput. Graph. Forum, 2021

Visualization in Astrophysics: Developing New Methods, Discovering Our Universe, and Educating the Earth.

[BibT_eX]

[DOI]

Comput. Graph. Forum, 2021

An Interactive Visual Demo of Bias Mitigation Techniques for Word Representations From a Geometric Perspective.

[BibT_eX]

[DOI]

Chin-Chia Michael Yeh

Junpeng Wang

Wei Zhang

Proceedings of the NeurIPS 2021 Competitions and Demonstrations Track, 2021

A Visual Tour of Bias Mitigation Techniques for Word Representations.

[BibT_eX]

[DOI]

Proceedings of the KDD '21: The 27th ACM SIGKDD Conference on Knowledge Discovery and Data Mining, 2021

Spatio-Temporal Visualization of Interdependent Battery Bus Transit and Power Distribution Systems.

[BibT_eX]

[DOI]

Avishan Bagherinezhad

Michael Young

Masood Parvania

Proceedings of the IEEE Power & Energy Society Innovative Smart Grid Technologies Conference, 2021

Adaptive Covers for Mapper Graphs Using Information Criteria.

[BibT_eX]

[DOI]

Nithin Chalapathi

Youjia Zhou

Proceedings of the 2021 IEEE International Conference on Big Data (Big Data), 2021

Pheno-mapper: an interactive toolbox for the visual exploration of phenomics data.

[BibT_eX]

[DOI]

Proceedings of the BCB '21: 12th ACM International Conference on Bioinformatics, 2021

Mapper Interactive: A Scalable, Extendable, and Interactive Toolbox for the Visual Exploration of High-Dimensional Data.

[BibT_eX]

[DOI]

Proceedings of the 14th IEEE Pacific Visualization Symposium, 2021

2020

A Structural Average of Labeled Merge Trees for Uncertainty Visualization.

[BibT_eX]

[DOI]

IEEE Trans. Vis. Comput. Graph., 2020

Persistent Homology Guided Force-Directed Graph Layouts.

[BibT_eX]

[DOI]

IEEE Trans. Vis. Comput. Graph., 2020

Spectral sparsification of simplicial complexes for clustering and label propagation.

[BibT_eX]

[DOI]

Braxton Osting

Sourabh Palande

J. Comput. Geom., 2020

Moduli spaces of morse functions for persistence.

[BibT_eX]

[DOI]

J. Appl. Comput. Topol., 2020

On homotopy types of Vietoris-Rips complexes of metric gluings.

[BibT_eX]

[DOI]

J. Appl. Comput. Topol., 2020

Interpreting Graph Drawing with Multi-Agent Reinforcement Learning.

[BibT_eX]

[DOI]

Ilkin Safarli

Youjia Zhou

CoRR, 2020

Topological inference of manifolds with boundary.

[BibT_eX]

[DOI]

Yuan Wang

Comput. Geom., 2020

State of the Art in Time-Dependent Flow Topology: Interpreting Physical Meaningfulness Through Mathematical Properties.

[BibT_eX]

[DOI]

Comput. Graph. Forum, 2020

Interactive Visualization of Interdependent Power and Water Infrastructure Operation.

[BibT_eX]

[DOI]

Han Han

Konstantinos Oikonomou

Nithin Chalapathi

Masood Parvania

Proceedings of the IEEE Power & Energy Society Innovative Smart Grid Technologies Conference, 2020

Visual Demo of Discrete Stratified Morse Theory (Media Exposition).

[BibT_eX]

[DOI]

Youjia Zhou

Kevin P. Knudson

Proceedings of the 36th International Symposium on Computational Geometry, 2020

Mathematical Foundations in Visualization.

[BibT_eX]

[DOI]

Proceedings of the Foundations of Data Visualization., 2020

2019

The relationship between the intrinsic Čech and persistence distortion distances for metric graphs.

[BibT_eX]

[DOI]

J. Comput. Geom., 2019

Topology, Computation and Data Analysis (Dagstuhl Seminar 19212).

[BibT_eX]

[DOI]

Michael Kerber

Vijay Natarajan

Dagstuhl Reports, 2019

MVF Designer: Design and Visualization of Morse Vector Fields.

[BibT_eX]

[DOI]

CoRR, 2019

Uncertainty Visualization of 2D Morse Complex Ensembles Using Statistical Summary Maps.

[BibT_eX]

[DOI]

CoRR, 2019

TopoAct: Exploring the Shape of Activations in Deep Learning.

[BibT_eX]

[DOI]

CoRR, 2019

Mathematical Foundations in Visualization.

[BibT_eX]

[DOI]

CoRR, 2019

Intrinsic Interleaving Distance for Merge Trees.

[BibT_eX]

[DOI]

CoRR, 2019

Local Versus Global Distances for Zigzag Persistence Modules.

[BibT_eX]

[DOI]

CoRR, 2019

A kernel for multi-parameter persistent homology.

[BibT_eX]

[DOI]

Comput. Graph. X, 2019

Robust Extraction and Simplification of 2D Symmetric Tensor Field Topology.

[BibT_eX]

[DOI]

Jochen Jankowai

Ingrid Hotz

Comput. Graph. Forum, 2019

Revisiting Abnormalities in Brain Network Architecture Underlying Autism Using Topology-Inspired Statistical Inference.

[BibT_eX]

[DOI]

Brain Connect., 2019

Autism Classification Using Topological Features and Deep Learning: A Cautionary Tale.

[BibT_eX]

[DOI]

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

2018

Visual Exploration of Semantic Relationships in Neural Word Embeddings.

[BibT_eX]

[DOI]

Shusen Liu

Peer-Timo Bremer

Jayaraman J. Thiagarajan

IEEE Trans. Vis. Comput. Graph., 2018

Homology-Preserving Dimensionality Reduction via Manifold Landmarking and Tearing.

[BibT_eX]

[DOI]

CoRR, 2018

MOG: Mapper on Graphs for Relationship Preserving Clustering.

[BibT_eX]

[DOI]

Mustafa Hajij

CoRR, 2018

Topological Data Analysis of Functional MRI Connectivity in Time and Space Domains.

[BibT_eX]

[DOI]

Proceedings of the Connectomics in NeuroImaging - Second International Workshop, 2018

Discrete Stratified Morse Theory: A User's Guide.

[BibT_eX]

[DOI]

Kevin P. Knudson

Proceedings of the 34th International Symposium on Computational Geometry, 2018

Sheaf-Theoretic Stratification Learning.

[BibT_eX]

[DOI]

Adam Brown

Proceedings of the 34th International Symposium on Computational Geometry, 2018

Vietoris-Rips and Cech Complexes of Metric Gluings.

[BibT_eX]

[DOI]

Proceedings of the 34th International Symposium on Computational Geometry, 2018

Visual Detection of Structural Changes in Time-Varying Graphs Using Persistent Homology.

[BibT_eX]

[DOI]

Proceedings of the IEEE Pacific Visualization Symposium, 2018

2017

Visualizing High-Dimensional Data: Advances in the Past Decade.

[BibT_eX]

[DOI]

IEEE Trans. Vis. Comput. Graph., 2017

Open Problems in Computational Topology.

[BibT_eX]

[DOI]

William I. Gasarch

Brittany Terese Fasy

SIGACT News, 2017

Topology, Computation and Data Analysis (Dagstuhl Seminar 17292).

[BibT_eX]

[DOI]

Hamish A. Carr

Michael Kerber

Dagstuhl Reports, 2017

Driving Interactive Graph Exploration Using 0-Dimensional Persistent Homology Features.

[BibT_eX]

[DOI]

CoRR, 2017

Visualizing Sensor Network Coverage with Location Uncertainty.

[BibT_eX]

[DOI]

CoRR, 2017

Towards Spectral Sparsification of Simplicial Complexes Based on Generalized Effective Resistance.

[BibT_eX]

[DOI]

Braxton Osting

Sourabh Palande

Wathsala Widanagamaachchi

CoRR, 2017

Using Contour Trees in the Analysis and Visualization of Radio Astronomy Data Cubes.

[BibT_eX]

[DOI]

CoRR, 2017

Persistent Homology Guided Exploration of Time-Varying Graphs.

[BibT_eX]

[DOI]

CoRR, 2017

Exploring the evolution of pressure-perturbations to understand atmospheric phenomena.

[BibT_eX]

[DOI]

Proceedings of the 2017 IEEE Pacific Visualization Symposium, 2017

2016

Critical Point Cancellation in 3D Vector Fields: Robustness and Discussion.

[BibT_eX]

[DOI]

IEEE Trans. Vis. Comput. Graph., 2016

Interstitial and Interlayer Ion Diffusion Geometry Extraction in Graphitic Nanosphere Battery Materials.

[BibT_eX]

[DOI]

IEEE Trans. Vis. Comput. Graph., 2016

Analyzing simulation-based PRA data through traditional and topological clustering: A BWR station blackout case study.

[BibT_eX]

[DOI]

Reliab. Eng. Syst. Saf., 2016

The Grassmannian Atlas: A General Framework for Exploring Linear Projections of High-Dimensional Data.

[BibT_eX]

[DOI]

Comput. Graph. Forum, 2016

Visual exploration of multiway dependencies in multivariate data.

[BibT_eX]

[DOI]

Hoa Nguyen

Proceedings of the SIGGRAPH ASIA 2016, Macao, December 5-8, 2016, 2016

Kernel partial least squares regression for relating functional brain network topology to clinical measures of behavior.

[BibT_eX]

[DOI]

Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016

Exploring persistent local homology in topological data analysis.

[BibT_eX]

[DOI]

Brittany Terese Fasy

Proceedings of the 2016 IEEE International Conference on Acoustics, 2016

Convergence between Categorical Representations of Reeb Space and Mapper.

[BibT_eX]

[DOI]

Elizabeth Munch

Proceedings of the 32nd International Symposium on Computational Geometry, 2016

Rethinking sensitivity analysis of nuclear simulations with topology.

[BibT_eX]

[DOI]

Proceedings of the 2016 IEEE Pacific Visualization Symposium, 2016

2015

Robustness-Based Simplification of 2D Steady and Unsteady Vector Fields.

[BibT_eX]

[DOI]

IEEE Trans. Vis. Comput. Graph., 2015

ND<sup>2</sup>AV: N-dimensional data analysis and visualization analysis for the National Ignition Campaign.

[BibT_eX]

[DOI]

Comput. Vis. Sci., 2015

Local, smooth, and consistent Jacobi set simplification.

[BibT_eX]

[DOI]

Comput. Geom., 2015

Visual Exploration of High-Dimensional Data through Subspace Analysis and Dynamic Projections.

[BibT_eX]

[DOI]

Shusen Liu

Jayaraman J. Thiagarajan

Peer-Timo Bremer

Comput. Graph. Forum, 2015

Geometric Inference on Kernel Density Estimates.

[BibT_eX]

[DOI]

Jeff M. Phillips

Yan Zheng

Proceedings of the 31st International Symposium on Computational Geometry, 2015

2014

Distortion-Guided Structure-Driven Interactive Exploration of High-Dimensional Data.

[BibT_eX]

[DOI]

Comput. Graph. Forum, 2014

Approximating Local Homology from Samples.

[BibT_eX]

[DOI]

Primoz Skraba

Proceedings of the Twenty-Fifth Annual ACM-SIAM Symposium on Discrete Algorithms, 2014

Multivariate volume visualization through dynamic projections.

[BibT_eX]

[DOI]

Shusen Liu

Jayaraman J. Thiagarajan

Peer-Timo Bremer

Proceedings of the 4th IEEE Symposium on Large Data Analysis and Visualization, 2014

2D Vector Field Simplification Based on Robustness.

[BibT_eX]

[DOI]

Proceedings of the IEEE Pacific Visualization Symposium, 2014

Interpreting Feature Tracking Through the Lens of Robustness.

[BibT_eX]

[DOI]

Primoz Skraba

Proceedings of the Topological Methods in Data Analysis and Visualization III, 2014

2013

Visualizing Robustness of Critical Points for 2D Time-Varying Vector Fields.

[BibT_eX]

[DOI]

Comput. Graph. Forum, 2013

2012

Sampling for Local Homology with Vietoris-Rips Complexes

[BibT_eX]

[DOI]

Primoz Skraba

CoRR, 2012

Local homology transfer and stratification learning.

[BibT_eX]

[DOI]

Paul Bendich

Sayan Mukherjee

Proceedings of the Twenty-Third Annual ACM-SIAM Symposium on Discrete Algorithms, 2012

Topological analysis and visualization of cyclical behavior in memory reference traces.

[BibT_eX]

[DOI]

A. N. M. Imroz Choudhury

Proceedings of the 2012 IEEE Pacific Visualization Symposium, 2012

2011

Branching and Circular Features in High Dimensional Data.

[BibT_eX]

[DOI]

Brian Summa

Mikael Vejdemo-Johansson

IEEE Trans. Vis. Comput. Graph., 2011

Computing elevation maxima by searching the gauss sphere.

[BibT_eX]

[DOI]

Herbert Edelsbrunner

Dmitriy Morozov

ACM J. Exp. Algorithmics, 2011

2010

A computational screen for site selective A-to-I editing detects novel sites in neuron specific Hu proteins.

[BibT_eX]

[DOI]

BMC Bioinform., 2010

Stratification Learning through Homology Inference.

[BibT_eX]

[DOI]

Paul Bendich

Sayan Mukherjee

Proceedings of the Manifold Learning and Its Applications, 2010

2008

Spatial Scan Statistics for Graph Clustering.

[BibT_eX]

[DOI]

Proceedings of the SIAM International Conference on Data Mining, 2008

2007

Two proteins for the price of one: the design of maximally compressed coding sequences.

[BibT_eX]

[DOI]

Nat. Comput., 2007

2006

A Framework for Modeling DNA Based Molecular Systems.

[BibT_eX]

[DOI]

Sudheer Sahu