Barry Zeeberg

According to our database, Barry Zeeberg authored at least 13 papers between 1995 and 2011.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2011

RedundancyMiner: De-replication of redundant GO categories in microarray and proteomics analysis.

Barry Zeeberg, Hongfang Liu, Ari B. Kahn, Martin Ehler, Vinodh N. Rajapakse, Robert F. Bonner, Jacob D. Brown, Brian P. Brooks, Vladimir L. Larionov, William C. Reinhold, John N. Weinstein, Yves Pommier

BMC Bioinform., 2011

2010

Ontogenomic study of the relationship between number of gene splice variants and GO categorization.

Ari B. Kahn, Barry Zeeberg, Michael C. Ryan, D. Curtis Jamison, David M. Rockoff, Yves Pommier, John N. Weinstein

Bioinform., 2010

Analysis of Temporal-spatial Co-variation within Gene Expression Microarray Data in an Organogenesis Model.

Martin Ehler, Vinodh N. Rajapakse, Barry Zeeberg, Brian P. Brooks, Jacob D. Brown, Wojciech Czaja, Robert F. Bonner

Proceedings of the Bioinformatics Research and Applications, 6th International Symposium, 2010

2008

SpliceCenter: A suite of web-based bioinformatic applications for evaluating the impact of alternative splicing on RT-PCR, RNAi, microarray, and peptide-based studies.

Michael C. Ryan, Barry Zeeberg, Natasha J. Caplen, James A. Cleland, Ari B. Kahn, Hongfang Liu, John N. Weinstein

BMC Bioinform., 2008

VennMaster: Area-proportional Euler diagrams for functional GO analysis of microarrays.

Hans A. Kestler, André Müller, Johann M. Kraus, Malte Buchholz, Thomas M. Gress, Hongfang Liu, David W. Kane, Barry Zeeberg, John N. Weinstein

BMC Bioinform., 2008

2007

SpliceMiner: a high-throughput database implementation of the NCBI Evidence Viewer for microarray splice variant analysis.

Ari B. Kahn, Michael C. Ryan, Hongfang Liu, Barry Zeeberg, D. Curtis Jamison, John N. Weinstein

BMC Bioinform., 2007

AffyProbeMiner: a web resource for computing or retrieving accurately redefined Affymetrix probe sets.

Hongfang Liu, Barry Zeeberg, Gang Qu, Akif Günes Koru, Alessandro Ferrucci, Ari B. Kahn, Michael C. Ryan, Antej Nuhanovic, Peter J. Munson, William C. Reinhold, David W. Kane, John N. Weinstein

Bioinform., 2007

2005

High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID).

Barry Zeeberg, Haiying Qin, Sudarshan Narasimhan, Margot Sunshine, Hong Cao, David W. Kane, Mark Reimers, Robert M. Stephens, David Bryant, Stanley K. Burt, Eldad Elnekave, Danielle M. Hari, Thomas A. Wynn, Charlotte Cunningham-Rundles, Donn M. Stewart, David Nelson, John N. Weinstein

BMC Bioinform., 2005

2004

Mistaken Identifiers: Gene name errors can be introduced inadvertently when using Excel in bioinformatics.

Barry Zeeberg, Joseph Riss, David W. Kane, Kimberly J. Bussey, Edward Uchio, W. Marston Linehan, J. Carl Barrett, John N. Weinstein

BMC Bioinform., 2004

2003

Development of Gene Ontology Tool for Biological Interpretation of Genomic and Proteomic Data.

Weimin Feng, Geoffrey Wang, Barry Zeeberg, Kejiao Guo, Anthony T. Fojo, David W. Kane, William C. Reinhold, Samir Lababidi, John N. Weinstein, May D. Wang

Proceedings of the AMIA 2003, 2003

1998

Metabolic Pathway Interface to Molecular Biology Databases.

Barry Zeeberg, Kevin Watanabe, Susumu Goto, Ross A. Overbeek, Larry Kerschberg, George Michaels

Proceedings of the 10th International Conference on Scientific and Statistical Database Management, 1998

1997

Identifying Chimerism in Proteins Using Hidden Markov Models of Codon Usage.

Lawrence Hunter, Barry Zeeberg

Proceedings of the 5th International Conference on Intelligent Systems for Molecular Biology, 1997

1995

Theoretical relationships of receptor and delivery sensitivities and measurable parameters in in vivo neuroreceptor-radioligand interactions.

Barry Zeeberg

IEEE Trans. Medical Imaging, 1995