Barbara E. Engelhardt

Orcid: 0000-0002-6139-7334

Affiliations:
  • Stanford University, CA, USA


According to our database1, Barbara E. Engelhardt authored at least 53 papers between 2000 and 2024.

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Bibliography

2024
Answering open questions in biology using spatial genomics and structured methods.
BMC Bioinform., December, 2024

Automating Transparency Mechanisms in the Judicial System Using LLMs: Opportunities and Challenges.
CoRR, 2024

Active Learning for Derivative-Based Global Sensitivity Analysis with Gaussian Processes.
CoRR, 2024

Inverse Reinforcement Learning with Multiple Planning Horizons.
RLJ, 2024

2023
Sequential Gaussian Processes for Online Learning of Nonstationary Functions.
IEEE Trans. Signal Process., 2023

Adaptive Interventions with User-Defined Goals for Health Behavior Change.
CoRR, 2023

Bayesian Non-linear Latent Variable Modeling via Random Fourier Features.
CoRR, 2023

Kernel Density Bayesian Inverse Reinforcement Learning.
CoRR, 2023

Compositional Q-learning for electrolyte repletion with imbalanced patient sub-populations.
Proceedings of the Machine Learning for Health, 2023

2022
A Poisson reduced-rank regression model for association mapping in sequencing data.
BMC Bioinform., 2022

Variance Minimization in the Wasserstein Space for Invariant Causal Prediction.
Proceedings of the International Conference on Artificial Intelligence and Statistics, 2022

2021
Causal network inference from gene transcriptional time-series response to glucocorticoids.
PLoS Comput. Biol., 2021

Brain kernel: A new spatial covariance function for fMRI data.
NeuroImage, 2021

Nonnegative spatial factorization.
CoRR, 2021

Nested Policy Reinforcement Learning.
CoRR, 2021

Active multi-fidelity Bayesian online changepoint detection.
Proceedings of the Thirty-Seventh Conference on Uncertainty in Artificial Intelligence, 2021

COP-E-CAT: cleaning and organization pipeline for EHR computational and analytic tasks.
Proceedings of the BCB '21: 12th ACM International Conference on Bioinformatics, 2021

Latent variable modeling with random features.
Proceedings of the 24th International Conference on Artificial Intelligence and Statistics, 2021

2020
Sparse multi-output Gaussian processes for online medical time series prediction.
BMC Medical Informatics Decis. Mak., 2020

Probabilistic Contrastive Principal Component Analysis.
CoRR, 2020

Nonparametric Deconvolution Models.
CoRR, 2020

A robust nonlinear low-dimensional manifold for single cell RNA-seq data.
BMC Bioinform., 2020

Defining admissible rewards for high-confidence policy evaluation in batch reinforcement learning.
Proceedings of the ACM CHIL '20: ACM Conference on Health, 2020

Patient-Specific Effects of Medication Using Latent Force Models with Gaussian Processes.
Proceedings of the 23rd International Conference on Artificial Intelligence and Statistics, 2020

2019
Defining Admissible Rewards for High Confidence Policy Evaluation.
CoRR, 2019

Statistical tests for detecting variance effects in quantitative trait studies.
Bioinform., 2019

End-to-end Training of Deep Probabilistic CCA on Paired Biomedical Observations.
Proceedings of the Thirty-Fifth Conference on Uncertainty in Artificial Intelligence, 2019

netNMF-sc: A Network Regularization Algorithm for Dimensionality Reduction and Imputation of Single-Cell Expression Data.
Proceedings of the Research in Computational Molecular Biology, 2019

An Optimal Policy for Patient Laboratory Tests in Intensive Care Units.
Proceedings of the Biocomputing 2019: Proceedings of the Pacific Symposium, 2019

Predicting Sick Patient Volume in a Pediatric Outpatient Setting using Time Series Analysis.
Proceedings of the Machine Learning for Healthcare Conference, 2019

2018
Clustering gene expression time series data using an infinite Gaussian process mixture model.
PLoS Comput. Biol., 2018

How algorithmic confounding in recommendation systems increases homogeneity and decreases utility.
Proceedings of the 12th ACM Conference on Recommender Systems, 2018

PG-TS: Improved Thompson Sampling for Logistic Contextual Bandits.
Proceedings of the Advances in Neural Information Processing Systems 31: Annual Conference on Neural Information Processing Systems 2018, 2018

2017
The impact of rare variation on gene expression across tissues.
Nat., 2017

Adaptive Randomized Dimension Reduction on Massive Data.
J. Mach. Learn. Res., 2017

Coupled Compound Poisson Factorization.
CoRR, 2017

A Reinforcement Learning Approach to Weaning of Mechanical Ventilation in Intensive Care Units.
Proceedings of the Thirty-Third Conference on Uncertainty in Artificial Intelligence, 2017

Dynamic Collaborative Filtering With Compound Poisson Factorization.
Proceedings of the 20th International Conference on Artificial Intelligence and Statistics, 2017

2016
Context Specific and Differential Gene Co-expression Networks via Bayesian Biclustering.
PLoS Comput. Biol., 2016

Bayesian group factor analysis with structured sparsity.
J. Mach. Learn. Res., 2016

Fast moment estimation for generalized latent Dirichlet models.
CoRR, 2016

Hierarchical Compound Poisson Factorization.
Proceedings of the 33nd International Conference on Machine Learning, 2016

2015
Clustering with Beta Divergences.
CoRR, 2015

2013
Stability selection for regression-based models of transcription factor-DNA binding specificity.
Bioinform., 2013

2006
A graphical model for predicting protein molecular function.
Proceedings of the Machine Learning, 2006

2005
Protein Molecular Function Prediction by Bayesian Phylogenomics.
PLoS Comput. Biol., 2005

2003
Factored Planning.
Proceedings of the IJCAI-03, 2003

2002
The RADARSAT-MAMM Automated Mission Planner.
AI Mag., 2002

2001
Casper: Space Exploration through Continuous Planning.
IEEE Intell. Syst., 2001

Balancing deliberation and reaction, planning and execution for space robotic applications.
Proceedings of the IEEE/RSJ International Conference on Intelligent Robots and Systems, 2001

A Tool for Autonomous Ground-Based Rover Planning.
Proceedings of the Fourteenth International Florida Artificial Intelligence Research Society Conference, 2001

2000
Empirical Evaluation of Local Search Methods for Adapting Planning Policies in a Stochastic Environment.
Proceedings of the Local Search for Planning and Scheduling, 2000

Using Generic Preferences to Incrementally Improve Plan Quality.
Proceedings of the Fifth International Conference on Artificial Intelligence Planning Systems, 2000


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