Barbara Di Camillo

Orcid: 0000-0001-8415-4688

According to our database1, Barbara Di Camillo authored at least 81 papers between 2003 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Dataset
Other 

Links

Online presence:

On csauthors.net:

Bibliography

2024
Predicting clinical events characterizing the progression of amyotrophic lateral sclerosis via machine learning approaches using routine visits data: a feasibility study.
BMC Medical Informatics Decis. Mak., December, 2024

From translational bioinformatics computational methodologies to personalized medicine.
J. Biomed. Informatics, 2024

Effect of Clinical History on Predictive Model Performance for Renal Complications of Diabetes.
CoRR, 2024

Validity of Feature Importance in Low-Performing Machine Learning for Tabular Biomedical Data.
CoRR, 2024

Exploring the Impact of Environmental Pollutants on Multiple Sclerosis Progression.
CoRR, 2024

Unveiling Trustworthy AI Challenges: Characterizing Prediction Reliability.
Proceedings of the 8th IEEE Forum on Research and Technologies for Society and Industry Innovation, 2024

iDPP@CLEF 2024: The Intelligent Disease Progression Prediction Challenge.
Proceedings of the Advances in Information Retrieval, 2024

Using Wearable and Environmental Data to Improve the Prediction of Amyotrophic Lateral Sclerosis and Multiple Sclerosis Progression: an Explorative Study.
Proceedings of the Working Notes of the Conference and Labs of the Evaluation Forum (CLEF 2024), 2024



2023
A model to forecast the two-year variation of subjective wellbeing in the elderly population.
BMC Medical Informatics Decis. Mak., December, 2023


Artificial intelligence and statistical methods for stratification and prediction of progression in amyotrophic lateral sclerosis: A systematic review.
Artif. Intell. Medicine, August, 2023

iDPP@CLEF 2023: The Intelligent Disease Progression Prediction Challenge.
Proceedings of the Advances in Information Retrieval, 2023

DAVI: A Dataset for Automatic Variant Interpretation.
Proceedings of the Experimental IR Meets Multilinguality, Multimodality, and Interaction, 2023

Baseline Machine Learning Approaches To Predict Multiple Sclerosis Disease Progression.
Proceedings of the Working Notes of the Conference and Labs of the Evaluation Forum (CLEF 2023), 2023



Dealing with Data Scarcity in Rare Diseases: Dynamic Bayesian Networks and Transfer Learning to Develop Prognostic Models of Amyotrophic Lateral Sclerosis.
Proceedings of the Artificial Intelligence in Medicine, 2023

2022
Leveraging process mining for modeling progression trajectories in amyotrophic lateral sclerosis.
BMC Medical Informatics Decis. Mak., November, 2022

Investigating differential abundance methods in microbiome data: A benchmark study.
PLoS Comput. Biol., September, 2022

Guest Editorial: Deep Learning For Genomics.
IEEE ACM Trans. Comput. Biol. Bioinform., 2022

Time-series analysis of multidimensional clinical-laboratory data by dynamic Bayesian networks reveals trajectories of COVID-19 outcomes.
Comput. Methods Programs Biomed., 2022

Identify, quantify and characterize cellular communication from single-cell RNA sequencing data with <i>scSeqComm</i>.
Bioinform., 2022

Explainable Deep-Learning Model Reveals Past Cardiovascular Disease in Patients with Diabetes Using Free-Form Visit Reports.
Proceedings of the Machine Learning, Optimization, and Data Science, 2022

Baseline Machine Learning Approaches To Predict Amyotrophic Lateral Sclerosis Disease Progression.
Proceedings of the Working Notes of CLEF 2022 - Conference and Labs of the Evaluation Forum, Bologna, Italy, September 5th - to, 2022


Overview of iDPP@CLEF 2022: The Intelligent Disease Progression Prediction Challenge.
Proceedings of the Working Notes of CLEF 2022 - Conference and Labs of the Evaluation Forum, Bologna, Italy, September 5th - to, 2022

2021
A Deep Learning Approach to Predict Diabetes' Cardiovascular Complications From Administrative Claims.
IEEE J. Biomed. Health Informatics, 2021

Mathematical modelling of SigE regulatory network reveals new insights into bistability of mycobacterial stress response.
BMC Bioinform., 2021

Beware to ignore the rare: how imputing zero-values can improve the quality of 16S rRNA gene studies results.
BMC Bioinform., 2021

Comparison of microbiome samples: methods and computational challenges.
Briefings Bioinform., 2021

Comparing the Predictive Power of Heart Failure Hospitalisation Risk Scores in the Diabetic Outpatient Clinic and Primary Care Settings.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

Predicting hypertension onset using logistic regression models with labs and/or easily accessible variables: the role of blood pressure measurements.
Proceedings of the IEEE EMBS International Conference on Biomedical and Health Informatics, 2021

A Dynamic Bayesian Network model for simulating the progression to diabetes onset in the ageing population.
Proceedings of the IEEE EMBS International Conference on Biomedical and Health Informatics, 2021

Recurrent Neural Network to Predict Renal Function Impairment in Diabetic Patients via Longitudinal Routine Check-up Data.
Proceedings of the Artificial Intelligence in Medicine, 2021

2020
Guest Editorial Data Science in Smart Healthcare: Challenges and Opportunities.
IEEE J. Biomed. Health Informatics, 2020

Exploiting mutual information for the imputation of static and dynamic mixed-type clinical data with an adaptive k-nearest neighbours approach.
BMC Medical Informatics Decis. Mak., 2020

A Combined Interpolation and Weighted K-Nearest Neighbours Approach for the Imputation of Longitudinal ICU Laboratory Data.
J. Heal. Informatics Res., 2020

A practical perspective on the concordance index for the evaluation and selection of prognostic time-to-event models.
J. Biomed. Informatics, 2020

SPARSim single cell: a count data simulator for scRNA-seq data.
Bioinform., 2020

2019
Analysis of a Minimal Gene Regulatory Network for Cell Differentiation.
IEEE Control. Syst. Lett., 2019

A Dynamic Bayesian Network model for the simulation of Amyotrophic Lateral Sclerosis progression.
BMC Bioinform., 2019

metaSPARSim: a 16S rRNA gene sequencing count data simulator.
BMC Bioinform., 2019

How to design a single-cell RNA-sequencing experiment: pitfalls, challenges and perspectives.
Briefings Bioinform., 2019

Interpolation and K-Nearest Neighbours Combined Imputation for Longitudinal ICU Laboratory Data.
Proceedings of the 2019 IEEE International Conference on Healthcare Informatics, 2019

Deep convolutional neural network for survival estimation of Amyotrophic Lateral Sclerosis patients.
Proceedings of the 27th European Symposium on Artificial Neural Networks, 2019

Detecting Undiagnosed Diabetes: Proof-of-Concept Based on the Health-Information Exchange System of the Veneto Region (North-East Italy).
Proceedings of the 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2019

2018
Optimizing PCR primers targeting the bacterial 16S ribosomal RNA gene.
BMC Bioinform., 2018

Measuring the diversity of the human microbiota with targeted next-generation sequencing.
Briefings Bioinform., 2018

Importance of Recalibrating Models for Type 2 Diabetes Onset Prediction: Application of the Diabetes Population Risk Tool on the Health and Retirement Study.
Proceedings of the 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2018

2017
A Dynamic Bayesian Network model for simulation of disease progression in Amyotrophic Lateral Sclerosis patients.
PeerJ Prepr., 2017

bnstruct: an R package for Bayesian Network structure learning in the presence of missing data.
Bioinform., 2017

2016
A rule-based model of insulin signalling pathway.
BMC Syst. Biol., 2016

2015
A Dynamic Bayesian Network model for long-term simulation of clinical complications in type 1 diabetes.
J. Biomed. Informatics, 2015

A Bayesian Network analysis of the probabilistic relations between risk factors in the predisposition to type 2 diabetes.
Proceedings of the 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2015

Modeling HPV early promoter regulation.
Proceedings of the 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2015

A Bayesian Network for Probabilistic Reasoning and Imputation of Missing Risk Factors in Type 2 Diabetes.
Proceedings of the Artificial Intelligence in Medicine, 2015

2014
Reducing bias in RNA sequencing data: a novel approach to compute counts.
BMC Bioinform., 2014

Compression and fast retrieval of SNP data.
Bioinform., 2014

ABACUS: an entropy-based cumulative bivariate statistic robust to rare variants and different direction of genotype effect.
Bioinform., 2014

2013
Knowledge Driven Variable Selection (KDVS) - a new approach to enrichment analysis of gene signatures obtained from high-throughput data.
Source Code Biol. Medicine, 2013

2012
MORE: Mixed Optimization for Reverse Engineering - An Application to Modeling Biological Networks Response via Sparse Systems of Nonlinear Differential Equations.
IEEE ACM Trans. Comput. Biol. Bioinform., 2012

SimBioNeT: A Simulator of Biological Network Topology.
IEEE ACM Trans. Comput. Biol. Bioinform., 2012

Qualitative Reasoning for Biological Network Inference from Systematic Perturbation Experiments.
IEEE ACM Trans. Comput. Biol. Bioinform., 2012

Dynamic Modeling of miRNA-mediated Feed-Forward Loops.
J. Comput. Biol., 2012

Improving biomarker list stability by integration of biological knowledge in the learning process.
BMC Bioinform., 2012

Bag of Naïve Bayes: biomarker selection and classification from genome-wide SNP data.
BMC Bioinform., 2012

Argot2: a large scale function prediction tool relying on semantic similarity of weighted Gene Ontology terms.
BMC Bioinform., 2012

Integrating literature-constrained and data-driven inference of signalling networks.
Bioinform., 2012

Comparative analysis of algorithms for whole-genome assembly of pyrosequencing data.
Briefings Bioinform., 2012

Minimizing Time When Applying Bootstrap to Contingency Tables Analysis of Genome-Wide Data.
Proceedings of the Learning and Intelligent Optimization - 6th International Conference, 2012

Discriminant functional gene groups identification with machine learning and prior knowledge.
Proceedings of the 20th European Symposium on Artificial Neural Networks, 2012

2011
Sensitivity Analysis of Retrovirus HTLV-1 Transactivation.
J. Comput. Biol., 2011

2010
An Optimized Data Structure for High Throughput 3D Proteomics Data: mzRTree
CoRR, 2010

Retrovirus HTLV-1 Gene Circuit: A Potential Oscillator for Eukaryotes.
Proceedings of the Biocomputing 2010: Proceedings of the Pacific Symposium, 2010

Qualitative Reasoning on Systematic Gene Perturbation Experiments.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2010

2009
On the Difficulty of Inferring Gene Regulatory Networks: A Study of the Fitness Landscape Generated by Relative Squared Error.
Proceedings of the Artifical Evolution, 2009

2007
Significance analysis of microarray transcript levels in time series experiments.
BMC Bioinform., 2007

2005
A quantization method based on threshold optimization for microarray short time series.
BMC Bioinform., 2005

2003
Modelling dynamic gene expression profiles.
PhD thesis, 2003


  Loading...