Bahrad A. Sokhansanj

According to our database, Bahrad A. Sokhansanj authored at least 21 papers between 2000 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Streamlining Computational Fragment-Based Drug Discovery through Evolutionary Optimization Informed by Ligand-Based Virtual Prescreening.

Rohan Chandraghatgi, Hai-Feng Ji, Gail L. Rosen, Bahrad A. Sokhansanj

J. Chem. Inf. Model., 2024

Predicting Anti-microbial Resistance using Large Language Models.

Hyunwoo Yoo, Bahrad A. Sokhansanj, James R. Brown, Gail Rosen

CoRR, 2024

2023

Semi-Supervised and Incremental Sequence Analysis for Taxonomic Classification.

Adriana Fasino, Emrecan Ozdogan, Bahrad A. Sokhansanj, Gail Rosen, Robi Polikar

Proceedings of the IEEE Symposium Series on Computational Intelligence, 2023

2022

Predicting COVID-19 disease severity from SARS-CoV-2 spike protein sequence by mixed effects machine learning.

Bahrad A. Sokhansanj, Gail L. Rosen

Comput. Biol. Medicine, 2022

Semi-supervised and Incremental VSEARCH for Metagenomic Classification.

Emrecan Ozdogan, Adriana Fasino, Rachel Nguyen, Bahrad A. Sokhansanj, Gail Rosen, Robi Polikar

Proceedings of the IEEE Symposium Series on Computational Intelligence, 2022

2021

Learning, visualizing and exploring 16S rRNA structure using an attention-based deep neural network.

Zhengqiao Zhao, Stephen Woloszynek, Felix Agbavor, Joshua Chang Mell, Bahrad A. Sokhansanj, Gail L. Rosen

PLoS Comput. Biol., 2021

Incremental and Semi-Supervised Learning of 16S-rRNA Genes For Taxonomic Classification.

Emrecan Ozdogan, Norman C. Sabin, Thomas Gracie, Steven Portley, Mali Halac, Thomas Coard, William L. Trimble, Bahrad A. Sokhansanj, Gail Rosen, Robi Polikar

Proceedings of the IEEE Symposium Series on Computational Intelligence, 2021

Incremental & Semi-Supervised Learning for Functional Analysis of Protein Sequences.

Mali Halac, Bahrad A. Sokhansanj, William L. Trimble, Thomas Coard, Norman C. Sabin, Emrecan Ozdogan, Robi Polikar, Gail L. Rosen

Proceedings of the IEEE Symposium Series on Computational Intelligence, 2021

2020

Genetic grouping of SARS-CoV-2 coronavirus sequences using informative subtype markers for pandemic spread visualization.

Zhengqiao Zhao, Bahrad A. Sokhansanj, Charvi Malhotra, Kitty Zheng, Gail L. Rosen

PLoS Comput. Biol., 2020

2009

Scalable Dynamic Fuzzy Biomolecular Network Models for Large Scale Biology.

Bahrad A. Sokhansanj, Suman Datta, Xiaohua Hu

Proceedings of the Fuzzy Systems in Bioinformatics and Computational Biology, 2009

Mining, Modeling, and Evaluation of Subnetworks From Large Biomolecular Networks and Its Comparison Study.

Xiaohua Hu, Michael K. Ng, Fang-Xiang Wu, Bahrad A. Sokhansanj

IEEE Trans. Inf. Technol. Biomed., 2009

2008

Metagenome Fragment Classification Using N-Mer Frequency Profiles.

Gail L. Rosen, Elaine Garbarine, Diamantino Caseiro, Robi Polikar, Bahrad A. Sokhansanj

Adv. Bioinformatics, 2008

2007

A Novel Approach for Mining and Fuzzy Simulation of Subnetworks From Large Biomolecular Networks.

Xiaohua Hu, Bahrad A. Sokhansanj, Daniel Duanqing Wu, Yuchun Tang

IEEE Trans. Fuzzy Syst., 2007

Integrated modeling methodology for microtubule dynamics and Taxol kinetics with experimentally identifiable parameters.

He Zhao, Bahrad A. Sokhansanj

Comput. Methods Programs Biomed., 2007

Accelerated search for biomolecular network models to interpret high-throughput experimental data.

Suman Datta, Bahrad A. Sokhansanj

BMC Bioinform., 2007

Mining and Dynamic Simulation of Sub-Networks from Large Biomolecular Networks.

Xiaohua Hu, Fang-Xiang Wu, Michael K. Ng, Bahrad A. Sokhansanj

Proceedings of the 2007 International Conference on Artificial Intelligence, 2007

2005

Visualization of protein-protein interaction network for knowledge discovery.

Weizhong Zhu, Xia Lin, Xiaohua Hu, Bahrad A. Sokhansanj

Proceedings of the 2005 IEEE International Conference on Granular Computing, 2005

2004

An indexed modeling and experimental strategy for biosignatures of pathogen and host.

Andrew A. Quong, J. R. Kercher, Paula M. McCready, Judy N. Quong, Bahrad A. Sokhansanj, J. Patrick Fitch

J. Frankl. Inst., 2004

Linear fuzzy gene network models obtained from microarray data by exhaustive search.

Bahrad A. Sokhansanj, J. Patrick Fitch, Judy N. Quong, Andrew A. Quong

BMC Bioinform., 2004

2001

Matrix formulation of a universal microbial transcript profiling system.

J. Patrick Fitch, Jefferson Ng, Bahrad A. Sokhansanj

Proceedings of the IEEE International Conference on Acoustics, 2001

2000

Genomic engineering: moving beyond DNA sequence to function.

J. Patrick Fitch, Bahrad A. Sokhansanj

Proc. IEEE, 2000