2015
HLA-VBSeq: accurate HLA typing at full resolution from whole-genome sequencing data.
BMC Genom., 2015

Estimating copy numbers of alleles from population-scale high-throughput sequencing data.
BMC Bioinform., 2015

2014
SVEM: A Structural Variant Estimation Method Using Multi-mapped Reads on Breakpoints.
Proceedings of the Algorithms for Computational Biology - First International Conference, 2014

HapMonster: A Statistically Unified Approach for Variant Calling and Haplotyping Based on Phase-Informative Reads.
Proceedings of the Algorithms for Computational Biology - First International Conference, 2014

2013
iSVP: an integrated structural variant calling pipeline from high-throughput sequencing data.
BMC Syst. Biol., 2013

A statistical variant calling approach from pedigree information and local haplotyping with phase informative reads.
Bioinform., 2013

2009
Evolution of multiple phosphodiesterase isoforms in stickleback involved in cAMP signal transduction pathway.
BMC Syst. Biol., 2009