Bioinformatics-assisted, integrated omics studies on medicinal plants.
Briefings Bioinform., 2020
MepmiRDB: a medicinal plant microRNA database.
Database J. Biol. Databases Curation, 2019
Investigating microRNA-mediated regulation of the nascent nuclear transcripts in plants: a bioinformatics workflow.
Briefings Bioinform., 2018
Construction of regulatory networks mediated by small RNAs responsive to abiotic stresses in rice (Oryza sativa).
Comput. Biol. Chem., 2015
A reversed framework for the identification of microRNA-target pairs in plants.
Briefings Bioinform., 2013
PlantNATsDB: a comprehensive database of plant natural antisense transcripts.
Nucleic Acids Res., 2012
PmiRKB: a plant microRNA knowledge base.
Nucleic Acids Res., 2011
PRIN, a predicted rice interactome network.
BMC Bioinform., 2011
Toward microRNA-mediated gene regulatory networks in plants.
Briefings Bioinform., 2011
Functional characterization of plant small RNAs based on next-generation sequencing data.
Comput. Biol. Chem., 2010
Small RNAs in angiosperms: sequence characteristics, distribution and generation.
Bioinform., 2010