2025
Synthesizing Images With Annotations for Medical Image Segmentation Using Diffusion Probabilistic Model.
Int. J. Imaging Syst. Technol., January, 2025
2024
Enhanced Deformation Vector Field Generation With Diffusion Models and Mamba-Based Network for Registration Performance Enhancement.
Int. J. Imaging Syst. Technol., 2024
Combing 3D body surface and CT volumetric data for ankylosing spondylitis surgery outcome simulation.
Proceedings of the IEEE International Symposium on Biomedical Imaging, 2024
2023
A Comprehensive Landscape of Imaging Feature-Associated RNA Expression Profiles in Human Breast Tissue.
Sensors, February, 2023
Expectation-maximization algorithm leads to domain adaptation for a perineural invasion and nerve extraction task in whole slide digital pathology images.
Medical Biol. Eng. Comput., February, 2023
AttenScribble: Attentive Similarity Learning for Scribble-Supervised Medical Image Segmentation.
CoRR, 2023
A dynamic interactive learning framework for automated 3D medical image segmentation.
CoRR, 2023
Synthesizing with Diffusion model for improving medical image segmentation performance.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023
2022
A VR-based volumetric medical image segmentation and visualization system with natural human interaction.
Virtual Real., 2022
Two fully automated data-driven 3D whole-breast segmentation strategies in MRI for MR-based breast density using image registration and U-Net with a focus on reproducibility.
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Vis. Comput. Ind. Biomed. Art, 2022
Open-source algorithm and software for computed tomography-based virtual pancreatoscopy and other applications.
Vis. Comput. Ind. Biomed. Art, 2022
An efficient deep equilibrium model for medical image segmentation.
Comput. Biol. Medicine, 2022
Multi-scale Multi-task Distillation for Incremental 3D Medical Image Segmentation.
Proceedings of the Computer Vision - ECCV 2022 Workshops, 2022
2021
An Open Source Platform for Computational Histopathology.
IEEE Access, 2021
MCMC Guided CNN Training and Segmentation for Pancreas Extraction.
IEEE Access, 2021
Cross-Dataset Multiple Organ Segmentation From CT Imagery Using FBP-Derived Domain Adaptation.
IEEE Access, 2021
2020
MCMC Guided CNN Training and Segmentation for Pancreas Extraction.
CoRR, 2020
2019
Sparse autoencoder for unsupervised nucleus detection and representation in histopathology images.
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Pattern Recognit., 2019
Is hippocampus getting bumpier with age: a quantitative analysis of fine-scale dentational feature under the hippocampus on 552 healthy subjects.
Proceedings of the Medical Imaging 2019: Image Processing, 2019
2017
Cerebrospinal and interstitial fluid transport via the glymphatic pathway modeled by optimal mass transport.
NeuroImage, 2017
Large scale digital prostate pathology image analysis combining feature extraction and deep neural network.
CoRR, 2017
Sparse Autoencoder for Unsupervised Nucleus Detection and Representation in Histopathology Images.
CoRR, 2017
Algorithm sensitivity analysis and parameter tuning for tissue image segmentation pipelines.
Bioinform., 2017
Evaluation of nucleus segmentation in digital pathology images through large scale image synthesis.
Proceedings of the Medical Imaging 2017: Digital Pathology, 2017
ConvNets with Smooth Adaptive Activation Functions for Regression.
Proceedings of the 20th International Conference on Artificial Intelligence and Statistics, 2017
2016
Statistical shape analysis using 3D Poisson equation - A quantitatively validated approach.
Medical Image Anal., 2016
Neural Networks with Smooth Adaptive Activation Functions for Regression.
CoRR, 2016
Hierarchical nucleus segmentation in digital pathology images.
Proceedings of the Medical Imaging 2016: Digital Pathology, San Diego, California, United States, 27 February, 2016
Multi-scale learning based segmentation of glands in digital colonrectal pathology images.
Proceedings of the Medical Imaging 2016: Digital Pathology, San Diego, California, United States, 27 February, 2016
Patch-Based Convolutional Neural Network for Whole Slide Tissue Image Classification.
Proceedings of the 2016 IEEE Conference on Computer Vision and Pattern Recognition, 2016
Safe "cloudification" of large images through picker APIs.
Proceedings of the AMIA 2016, 2016
2015
A Kalman Filtering Perspective for Multiatlas Segmentation.
SIAM J. Imaging Sci., 2015
Shape analysis based on depth-ordering.
Medical Image Anal., 2015
Efficient Multiple Instance Convolutional Neural Networks for Gigapixel Resolution Image Classification.
CoRR, 2015
2014
A Complete System for Automatic Extraction of Left Ventricular Myocardium From CT Images Using Shape Segmentation and Contour Evolution.
IEEE Trans. Image Process., 2014
Statistical Shape Analysis of Neuroanatomical Structures via Level-Set-based Shape Morphing.
SIAM J. Imaging Sci., 2014
Interpolation of longitudinal shape and image data via optimal mass transport.
Proceedings of the Medical Imaging 2014: Image Processing, 2014
A framework for joint image-and-shape analysis.
Proceedings of the Medical Imaging 2014: Image Processing, 2014
Reconstruction and feature selection for desorption electrospray ionization mass spectroscopy imagery.
Proceedings of the Medical Imaging 2014: Image-Guided Procedures, 2014
Depth-Based Shape-Analysis.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014
Signed poisson map for shape analysis.
Proceedings of the IEEE 11th International Symposium on Biomedical Imaging, 2014
2013
Automatic Segmentation of the Left Atrium From MR Images via Variational Region Growing With a Moments-Based Shape Prior.
IEEE Trans. Image Process., 2013
Sparse Texture Active Contour.
IEEE Trans. Image Process., 2013
Automatic Delineation of the Myocardial Wall From CT Images Via Shape Segmentation and Variational Region Growing.
IEEE Trans. Biomed. Eng., 2013
2012
Filtering in the Diffeomorphism Group and the Registration of Point Sets.
IEEE Trans. Image Process., 2012
A 3D interactive multi-object segmentation tool using local robust statistics driven active contours.
Medical Image Anal., 2012
Multiscale 3D shape representation and segmentation with applications to hippocampal/caudate extraction from brain MRI.
Medical Image Anal., 2012
Volumetric Mapping of Genus Zero Objects via Mass Preservation
CoRR, 2012
Synthesis of Realistic Subcortical Anatomy with Known Surface Deformations.
Proceedings of the Mesh Processing in Medical Image Analysis 2012, 2012
Automatic segmentation of the left atrium from MRI images using salient feature and contour evolution.
Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2012
Statistical Shape Analysis for Population Studies via Level-Set Based Shape Morphing.
Proceedings of the Computer Vision - ECCV 2012. Workshops and Demonstrations, 2012
2011
Estimation of myocardial volume at risk from CT angiography.
Proceedings of the Medical Imaging 2011: Computer-Aided Diagnosis, 2011
Combining atlas and active contour for automatic 3D medical image segmentation.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011
2010
A Coupled Global Registration and Segmentation Framework With Application to Magnetic Resonance Prostate Imagery.
IEEE Trans. Medical Imaging, 2010
'Active contour without edges', on parametric manifolds.
Proceedings of the Medical Imaging 2010: Image Processing, 2010
Shape based MRI prostate image segmentation using local information driven directional distance Bayesian method.
Proceedings of the Medical Imaging 2010: Image Processing, 2010
Image processing and registration in a point set representation.
Proceedings of the Medical Imaging 2010: Image Processing, 2010
Fast Hamilton-Jacobi equation solver and neural fiber bundle extraction.
Proceedings of the Medical Imaging 2010: Image Processing, 2010
Segmentation of the endocardial wall of the left atrium using local region-based active contours and statistical shape learning.
Proceedings of the Medical Imaging 2010: Image Processing, 2010
Simultaneous Multi-object Segmentation Using Local Robust Statistics and Contour Interaction.
Proceedings of the Medical Computer Vision. Recognition Techniques and Applications in Medical Imaging, 2010
2007
Tissue tracking: applications for brain MRI classification.
Proceedings of the Medical Imaging 2007: Image Processing, 2007