2020
Integrative network analysis identified master regulatory long non-coding RNAs underlying the squamous subtype of pancreatic ductal adenocarcinoma.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

2012
Posterior Association Networks and Functional Modules Inferred from Rich Phenotypes of Gene Perturbations.
PLoS Comput. Biol., 2012

2011
HTSanalyzeR: an R/Bioconductor package for integrated network analysis of high-throughput screens.
Bioinform., 2011

2008
Model-based prediction of cis-acting RNA elements regulating tissue-specific alternative splicing.
Proceedings of the 8th IEEE International Conference on Bioinformatics and Bioengineering, 2008

2007
Refining Detection of RNA-Protein Binding Regions by Pyrosequencing of RNA Fragments.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2007

Identification of Transcription Factor and microRNA Binding Sites from Array-derived Gene Expression Data.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2007