2023

Ensembl 2023.

[DOI]

Fergal J. Martin

,

M. Ridwan Amode

,

,

Olanrewaju Austine-Orimoloye

,

,

,

,

,

Andrew E. Berry

,

,

Simarpreet Kaur Bhurji

,

Alexandra Bignell

,

,

Paulo R. B. Lins

,

,

Shashank Budhanuru Ramaraju

,

Mehrnaz Charkhchi

,

Alexander Cockburn

,

Luca Da Rin Fioretto

,

Claire Davidson

,

Kamalkumar Jayantilal Dodiya

,

Sarah M. Donaldson

,

Bilal El Houdaigui

,

Tamara El Naboulsi

,

,

Carlos García-Girón

,

Thiago Augusto Lopes Genez

,

Gurpreet S. Ghattaoraya

,

Jose Gonzalez Martinez

,

Cristi Guijarro

,

,

,

Thibaut Hourlier

,

,

,

,

,

,

Diego Marques-Coelho

,

José Carlos Marugán

,

Gabriela Alejandra Merino

,

Louisse Paola Mirabueno

,

,

Syed Nakib Hossain

,

,

Manoj Pandian Sakthivel

,

,

,

,

Irina Prosovetskaia

,

José G. Pérez-Silva

,

Ahamed Imran Abdul Salam

,

Nuno Saraiva-Agostinho

,

Helen Schuilenburg

,

,

,

,

,

,

Ranjit Sukumaran

,

Dulika Sumathipala

,

Marie-Marthe Suner

,

Likhitha Surapaneni

,

Kyösti Sutinen

,

,

Francesca Floriana Tricomi

,

David Urbina-Gómez

,

Andres Veidenberg

,

Thomas A. Walsh

,

,

,

Natalie L. Willhoft

,

,

Jorge Álvarez-Jarreta

,

Marc Chakiachvili

,

,

Stefano Giorgetti

,

Leanne Haggerty

,

,

Jane E. Loveland

,

,

Jonathan M. Mudge

,

,

,

Stephen J. Trevanion

,

Andrea Winterbottom

,

,

,

,

Fiona Cunningham

,

,

,

,

Peter W. Harrison

,

Andrew D. Yates

,

Nucleic Acids Res., January, 2023

GENCODE: reference annotation for the human and mouse genomes in 2023.

[DOI]

,

Silvia Carbonell Sala

,

,

,

Jane E. Loveland

,

Jonathan M. Mudge

,

,

James C. Wright

,

,

,

Abhimanyu Banerjee

,

,

Andrew E. Berry

,

Alexandra Bignell

,

,

Ferriol Calvet Riera

,

Daniel Cerdán-Vélez

,

Fiona Cunningham

,

Claire Davidson

,

Sarah M. Donaldson

,

,

,

Stefano Giorgetti

,

Carlos García-Girón

,

Jose M. Gonzalez

,

,

Peter W. Harrison

,

Thibaut Hourlier

,

,

,

,

,

,

,

,

Fergal J. Martin

,

Laura Martínez Gómez

,

,

,

,

Vivek Ramalingam

,

,

Bianca M. Schmitt

,

Jacob M. Schreiber

,

,

Marie-Marthe Suner

,

Dulika Sumathipala

,

,

Barbara Uszczynska-Ratajczak

,

,

Yucheng T. Yang

,

Andrew D. Yates

,

Zahoor Zafrulla

,

Jyoti Choudhary

,

,

,

Tim J. P. Hubbard

,

,

,

,

Michael L. Tress

,

Nucleic Acids Res., January, 2023

2022

Ensembl 2022.

[DOI]

Fiona Cunningham

,

,

,

Jorge Álvarez-Jarreta

,

M. Ridwan Amode

,

Irina M. Armean

,

Olanrewaju Austine-Orimoloye

,

,

,

,

Andrew E. Berry

,

,

Alexandra Bignell

,

Konstantinos Billis

,

,

,

Mehrnaz Charkhchi

,

Carla A. Cummins

,

Luca Da Rin Fioretto

,

Claire Davidson

,

Kamalkumar Jayantilal Dodiya

,

Sarah M. Donaldson

,

Bilal El Houdaigui

,

Tamara El Naboulsi

,

,

Carlos García-Girón

,

Thiago A. L. Genez

,

Jose Gonzalez Martinez

,

Cristina Guijarro-Clarke

,

,

,

,

Thibaut Hourlier

,

,

Thomas Juettemann

,

,

,

,

,

,

José Carlos Marugán

,

Shamika Mohanan

,

,

,

,

,

,

,

,

Irina Prosovetskaia

,

Manoj Pandian Sakthivel

,

Ahamed Imran Abdul Salam

,

Bianca M. Schmitt

,

Helen Schuilenburg

,

,

José G. Pérez-Silva

,

,

,

Kyösti Sutinen

,

Ranjit Sukumaran

,

Dulika Sumathipala

,

Marie-Marthe Suner

,

,

,

Francesca Floriana Tricomi

,

David Urbina-Gómez

,

Andres Veidenberg

,

Thomas A. Walsh

,

,

Natalie L. Willhoft

,

Andrea Winterbottom

,

,

Marc Chakiachvili

,

,

,

Stefano Giorgetti

,

Leanne Haggerty

,

,

,

Jane E. Loveland

,

Fergal J. Martin

,

,

Jonathan M. Mudge

,

Matthieu Muffato

,

,

,

,

,

Stephen J. Trevanion

,

,

Peter W. Harrison

,

,

Andrew D. Yates

,

Daniel R. Zerbino

,

Nucleic Acids Res., 2022

2021

GENCODE 2021.

[DOI]

,

,

,

,

Jane E. Loveland

,

Jonathan M. Mudge

,

,

James C. Wright

,

,

,

Andrew E. Berry

,

Alexandra Bignell

,

,

Silvia Carbonell Sala

,

Fiona Cunningham

,

Tomás Di Domenico

,

Sarah M. Donaldson

,

,

Carlos García-Girón

,

Jose M. Gonzalez

,

,

,

Thibaut Hourlier

,

,

,

Osagie G. Izuogu

,

,

Fergal J. Martin

,

Laura Martínez

,

Shamika Mohanan

,

,

Fabio C. P. Navarro

,

,

,

,

Ferriol Calvet Riera

,

,

Bianca M. Schmitt

,

Eloise Stapleton

,

Marie-Marthe Suner

,

,

Barbara Uszczynska-Ratajczak

,

,

,

Yucheng T. Yang

,

Andrew D. Yates

,

Daniel R. Zerbino

,

,

Jyoti Choudhary

,

,

,

Tim J. P. Hubbard

,

,

,

Michael L. Tress

,

Nucleic Acids Res., 2021

2019

GENCODE reference annotation for the human and mouse genomes.

[DOI]

,

,

Anne-Maud Ferreira

,

,

,

Jane E. Loveland

,

Jonathan M. Mudge

,

,

James C. Wright

,

,

,

Andrew E. Berry

,

Alexandra Bignell

,

Silvia Carbonell Sala

,

Jacqueline Chrast

,

Fiona Cunningham

,

Tomás Di Domenico

,

Sarah M. Donaldson

,

,

Carlos García-Girón

,

Jose M. Gonzalez

,

,

,

Thibaut Hourlier

,

,

Osagie G. Izuogu

,

,

Fergal J. Martin

,

Laura Martínez

,

Shamika Mohanan

,

,

Fabio C. P. Navarro

,

,

,

,

,

Bianca M. Schmitt

,

Eloise Stapleton

,

Marie-Marthe Suner

,

,

Barbara Uszczynska-Ratajczak

,

,

Andrew D. Yates

,

Daniel R. Zerbino

,

,

Bronwen L. Aken

,

Jyoti Choudhary

,

,

,

Tim J. P. Hubbard

,

,

,

Alexandre Reymond

,

Michael L. Tress

,

Nucleic Acids Res., 2019

2018

Consensus coding sequence (CCDS) database: a standardized set of human and mouse protein-coding regions supported by expert curation.

[DOI]

Nucleic Acids Res., 2018

2014

Current status and new features of the Consensus Coding Sequence database.

[DOI]

Nucleic Acids Res., 2014