PretoxTM: a text mining system for extracting treatment-related findings from preclinical toxicology reports.
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J. Cheminformatics, December, 2025
Overview of the 8th Social Media Mining for Health Applications (#SMM4H) shared tasks at the AMIA 2023 Annual Symposium.
J. Am. Medical Informatics Assoc., 2024
Automatic Extraction of Medication Mentions from Tweets - Overview of the BioCreative VII Shared Task 3 Competition.
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Database J. Biol. Databases Curation, February, 2023
Revisiting the decay of scientific email addresses.
J. Assoc. Inf. Sci. Technol., 2022
New reasons for biologists to write with a formal language.
Database J. Biol. Databases Curation, 2022
Challenges and opportunities for mining adverse drug reactions: perspectives from pharma, regulatory agencies, healthcare providers and consumers.
Database J. Biol. Databases Curation, 2022
Overview of the Seventh Social Media Mining for Health Applications (#SMM4H) Shared Tasks at COLING 2022.
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Proceedings of The Seventh Workshop on Social Media Mining for Health Applications, 2022
Extraction of Medication Names from Twitter Using Augmentation and an Ensemble of Language Models.
CoRR, 2021
Biomedical articles share annotations with their citation neighbors.
BMC Bioinform., 2021
Semantic persistence of ambiguous biomedical names in the citation network.
Bioinform., 2020
Text Mining Applications.
Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 3, 2019
A new approach and gold standard toward author disambiguation in MEDLINE.
J. Am. Medical Informatics Assoc., 2019
One model per entity: using hundreds of machine learning models to recognize and normalize biomedical names in text.
Proceedings of the Biomedical NLP Workshop associated with RANLP 2017, Varna, 2017
A Drug-Centric View of Drug Development: How Drugs Spread from Disease to Disease.
PLoS Comput. Biol., 2016
Author Name Disambiguation in MEDLINE Based on Journal Descriptors and Semantic Types.
Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining, 2016
Biocuration with insufficient resources and fixed timelines.
Database J. Biol. Databases Curation, 2015
OntoGene web services for biomedical text mining.
BMC Bioinform., 2014
Quantifying the complexity of medical research.
Bioinform., 2013
Biomedical Text Mining and Its Applications.
PLoS Comput. Biol., 2009
Looking at Cerebellar Malformations through Text-Mined Interactomes of Mice and Humans.
PLoS Comput. Biol., 2009
Figure mining for biomedical research.
Bioinform., 2009
Visualizing evolution and impact of biomedical fields.
J. Biomed. Informatics, 2008
Imitating Manual Curation of Text-Mined Facts in Biomedicine.
PLoS Comput. Biol., 2006