scMUG: deep clustering analysis of single-cell RNA-seq data on multiple gene functional modules.

Vislocas: Vision transformers for identifying protein subcellular mis-localization signatures of different cancer subtypes from immunohistochemistry images.

PLA-GNN: Computational inference of protein subcellular location alterations under drug treatments with deep graph neural networks.

iEssLnc: quantitative estimation of lncRNA gene essentialities with meta-path-guided random walks on the lncRNA-protein interaction network.

NPI-RGCNAE: Fast Predicting ncRNA-Protein Interactions Using the Relational Graph Convolutional Network Auto-Encoder.

Predicting protein subchloroplast locations: the 10th anniversary.

KNIndex: a comprehensive database of physicochemical properties for k-tuple nucleotides.

NPI-GNN: Predicting ncRNA-protein interactions with deep graph neural networks.

VisFeature: a stand-alone program for visualizing and analyzing statistical features of biological sequences.