BCdatabaser: on-the-fly reference database creation for (meta-)barcoding.
Bioinform., 2020
reper: Genome-wide identification, classification and quantification of repetitive elements without an assembled genome.
J. Open Source Softw., 2018
ISAAC - InterSpecies Analysing Application using Containers.
BMC Bioinform., 2014
<i>proovread</i>: large-scale high-accuracy PacBio correction through iterative short read consensus.
Bioinform., 2014
Protein Interaction Networks - More Than Mere Modules.
PLoS Comput. Biol., 2010
The ITS2 Database III - sequences and structures for phylogeny.
Nucleic Acids Res., 2010
Searching in Protein State Space.
Proceedings of the Applications of Declarative Programming and Knowledge Management, 2009
The ITS2 Database II: homology modelling RNA structure for molecular systematics.
Nucleic Acids Res., 2008
ProfDistS: (profile-) distance based phylogeny on sequence - structure alignments.
Bioinform., 2008
Genome Expression Pathway Analysis Tool - Analysis and visualization of microarray gene expression data under genomic, proteomic and metabolic context.
BMC Bioinform., 2007
Context-Specific Independence Mixture Modelling for Protein Families.
Proceedings of the Knowledge Discovery in Databases: PKDD 2007, 2007
The internal transcribed spacer 2 database - a web server for (not only) low level phylogenetic analyses.
Nucleic Acids Res., 2006
SMART 5: domains in the context of genomes and networks.
Nucleic Acids Res., 2006
4SALE - A tool for synchronous RNA sequence and secondary structure alignment and editing.
BMC Bioinform., 2006
Modelling interaction sites in protein domains with interaction profile hidden Markov models.
Bioinform., 2006
Variation in structural location and amino acid conservation of functional sites in protein domain families.
BMC Bioinform., 2005
SMART 4.0: towards genomic data integration.
Nucleic Acids Res., 2004
HMM Logos for visualization of protein families.
BMC Bioinform., 2004
Recent improvements to the SMART domain-based sequence annotation resource.
Nucleic Acids Res., 2002
SMART: a web-based tool for the study of genetically mobile domains.
Nucleic Acids Res., 2000
SMART: identification and annotation of domains from signalling and extracellular protein sequences.
Nucleic Acids Res., 1999
A new approach to determine the neural network's domain of validity by elliptic expansion.
Proceedings of the 5th European Control Conference, 1999
Identifikation nichtlinearer dynamischer Systeme mit künstlichen neuronalen Netzen.
PhD thesis, 1998