2025
PyPropel: a Python-based tool for efficiently processing and characterising protein data.
BMC Bioinform., December, 2025

2023
DeepdlncUD: Predicting regulation types of small molecule inhibitors on modulating lncRNA expression by deep learning.
Comput. Biol. Medicine, September, 2023

TMKit: a Python interface for computational analysis of transmembrane proteins.
Briefings Bioinform., September, 2023

2015
Large-scale exploration and analysis of drug combinations.
Bioinform., 2015

2014
TCMSP: a database of systems pharmacology for drug discovery from herbal medicines.
J. Cheminformatics, 2014

Insights from systems pharmacology into cardiovascular drug discovery and therapy.
BMC Syst. Biol., 2014