RNA Modifications and Epitranscriptomics.

tModBase: deciphering the landscape of tRNA modifications and their dynamic changes from epitranscriptome data.

ChIPBase v3.0: the encyclopedia of transcriptional regulations of non-coding RNAs and protein-coding genes.

tsRFun: a comprehensive platform for decoding human tsRNA expression, functions and prognostic value by high-throughput small RNA-Seq and CLIP-Seq data.

ColorCells: a database of expression, classification and functions of lncRNAs in single cells.

dreamBase: DNA modification, RNA regulation and protein binding of expressed pseudogenes in human health and disease.

RMBase v2.0: deciphering the map of RNA modifications from epitranscriptome sequencing data.

ChIPBase v2.0: decoding transcriptional regulatory networks of non-coding RNAs and protein-coding genes from ChIP-seq data.

tRF2Cancer: A web server to detect tRNA-derived small RNA fragments (tRFs) and their expression in multiple cancers.

deepBase v2.0: identification, expression, evolution and function of small RNAs, LncRNAs and circular RNAs from deep-sequencing data.

RMBase: a resource for decoding the landscape of RNA modifications from high-throughput sequencing data.

StarScan: a web server for scanning small RNA targets from degradome sequencing data.

MtiBase: a database for decoding microRNA target sites located within CDS and 5′UTR regions from CLIP-Seq and expression profile datasets.

starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIP-Seq data.

ChIPBase: a database for decoding the transcriptional regulation of long non-coding RNA and microRNA genes from ChIP-Seq data.

starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data.

deepBase: a database for deeply annotating and mining deep sequencing data.