HumanNet v3: an improved database of human gene networks for disease research.
Nucleic Acids Res., 2022
Construction of Functional Protein Networks Using Domain Profile Associations.
Proceedings of the Protein-Protein Interaction Networks, Methods and Protocols., 2020
VirtualCytometry: a webserver for evaluating immune cell differentiation using single-cell RNA sequencing data.
Bioinform., 2020
BiomeNet: a database for construction and analysis of functional interaction networks for any species with a sequenced genome.
Bioinform., 2020
Pathway-specific protein domains are predictive for human diseases.
PLoS Comput. Biol., 2019
HumanNet v2: human gene networks for disease research.
Nucleic Acids Res., 2019
TRRUST v2: an expanded reference database of human and mouse transcriptional regulatory interactions.
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Nucleic Acids Res., 2018
Network perturbation by recurrent regulatory variants in cancer.
PLoS Comput. Biol., 2017
COEXPEDIA: exploring biomedical hypotheses via co-expressions associated with medical subject headings (MeSH).
Nucleic Acids Res., 2017
GWAB: a web server for the network-based boosting of human genome-wide association data.
Nucleic Acids Res., 2017
SoyNet: a database of co-functional networks for soybean Glycine max.
Nucleic Acids Res., 2017
MouseNet v2: a database of gene networks for studying the laboratory mouse and eight other model vertebrates.
Nucleic Acids Res., 2016
Weighted mutual information analysis substantially improves domain-based functional network models.
Bioinform., 2016
FlyNet: a versatile network prioritization server for the Drosophila community.
Nucleic Acids Res., 2015
AraNet v2: an improved database of co-functional gene networks for the study of <i>Arabidopsis thaliana</i> and 27 other nonmodel plant species.
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Nucleic Acids Res., 2015
RiceNet v2: an improved network prioritization server for rice genes.
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Nucleic Acids Res., 2015
EcoliNet: a database of cofunctional gene network for <i>Escherichia coli</i>.
Database J. Biol. Databases Curation, 2015
YeastNet v3: a public database of data-specific and integrated functional gene networks for <i>Saccharomyces cerevisiae</i>.
Nucleic Acids Res., 2014
MORPHIN: a web tool for human disease research by projecting model organism biology onto a human integrated gene network.
Nucleic Acids Res., 2014
WormNet v3: a network-assisted hypothesis-generating server for <i>Caenorhabditis elegans</i>.
Nucleic Acids Res., 2014
JiffyNet: a web-based instant protein network modeler for newly sequenced species.
Nucleic Acids Res., 2013
A high-accuracy consensus map of yeast protein complexes reveals modular nature of gene essentiality.
BMC Bioinform., 2007