2025
Evaluation Framework for AI Systems in "the Wild".
CoRR, April, 2025

Cornstarch: Distributed Multimodal Training Must Be Multimodality-Aware.
CoRR, March, 2025

Mordal: Automated Pretrained Model Selection for Vision Language Models.
CoRR, February, 2025

2024
Reducing Energy Bloat in Large Model Training.
Proceedings of the ACM SIGOPS 30th Symposium on Operating Systems Principles, 2024

2023
Perseus: Removing Energy Bloat from Large Model Training.
CoRR, 2023

Oobleck: Resilient Distributed Training of Large Models Using Pipeline Templates.
Proceedings of the 29th Symposium on Operating Systems Principles, 2023

2021
3DIV update for 2021: a comprehensive resource of 3D genome and 3D cancer genome.
Nucleic Acids Res., 2021

iCSDB: an integrated database of CRISPR screens.
Nucleic Acids Res., 2021

LineFS: Efficient SmartNIC Offload of a Distributed File System with Pipeline Parallelism.
Proceedings of the SOSP '21: ACM SIGOPS 28th Symposium on Operating Systems Principles, 2021

2020
ChimerDB 4.0: an updated and expanded database of fusion genes.
Nucleic Acids Res., 2020

2019
CaPSSA: visual evaluation of cancer biomarker genes for patient stratification and survival analysis using mutation and expression data.
Bioinform., 2019

Heterogeneous Isolated Execution for Commodity GPUs.
Proceedings of the Twenty-Fourth International Conference on Architectural Support for Programming Languages and Operating Systems, 2019

2018
3DIV: A 3D-genome Interaction Viewer and database.
Nucleic Acids Res., 2018

GEMiCCL: mining genotype and expression data of cancer cell lines with elaborate visualization.
Database J. Biol. Databases Curation, 2018

2017
ChimerDB 3.0: an enhanced database for fusion genes from cancer transcriptome and literature data mining.
Nucleic Acids Res., 2017

2015
miRseqViewer: multi-panel visualization of sequence, structure and expression for analysis of microRNA sequencing data.
Bioinform., 2015

Implementing a HARMS-based software system for use in collective robotics applications.
Proceedings of the 6th International Conference on Automation, Robotics and Applications, 2015

2013
miRGator v3.0: a microRNA portal for deep sequencing, expression profiling and mRNA targeting.
Nucleic Acids Res., 2013