2025
UDA-GS: A cross-center multimodal unsupervised domain adaptation framework for Glioma segmentation.
Comput. Biol. Medicine, 2025

2021
Integrative analysis of multiple types of genomic data using an accelerated failure time frailty model.
Comput. Stat., 2021

2017
CAME: identification of chromatin accessibility from nucleosome occupancy and methylome sequencing.
Bioinform., 2017

2015
New approaches to identify cancer heterogeneity in DNA methylation studies using the lepage test and multinomial logistic regression.
Proceedings of the IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, 2015

2011
A software package for next-gen bisulfite sequencing data analysis.
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

2008
PRIMEGENS-v2: genome-wide primer design for analyzing DNA methylation patterns of CpG islands.
Bioinform., 2008

Predicting DNA Methylation Susceptibility Using CpG Flanking Sequences.
Proceedings of the Biocomputing 2008, 2008

2007
Relational Analysis of CpG Islands Methylation and Gene Expression in Human Lymphomas Using Possibilistic C-Means Clustering and Modified Cluster Fuzzy Density.
IEEE ACM Trans. Comput. Biol. Bioinform., 2007

2005
Epigenetic Hypothesis Tests for Methylation and Acetylation in a Triple Microarray System.
J. Comput. Biol., 2005