2025
Advancing anomaly detection in computational workflows with active learning.
Future Gener. Comput. Syst., 2025
2024
Guest Editor's note: Special issue on challenges and solutions for porting applications to next-generation high performance computing systems.
Int. J. High Perform. Comput. Appl., January, 2024
Preface of special issue on advances in algorithms, models, hardware, and software for next-generations HPC systems.
Future Gener. Comput. Syst., 2024
Paving the way to hybrid quantum-classical scientific workflows.
Future Gener. Comput. Syst., 2024
Large Language Models for Anomaly Detection in Computational Workflows: From Supervised Fine-Tuning to In-Context Learning.
Proceedings of the International Conference for High Performance Computing, 2024
Modified CORDIC Algorithm for Givens Rotator.
Proceedings of the Computational Science - ICCS 2024, 2024
Machine Learning Workflows in the Computing Continuum for Environmental Monitoring.
Proceedings of the Computational Science - ICCS 2024, 2024
Dynamic Tracking, MLOps, and Workflow Integration: Enabling Transparent Reproducibility in Machine Learning.
Proceedings of the 20th IEEE International Conference on e-Science, 2024
A Workflow Management System Approach To Federated Learning: Application to Industry 4.0.
Proceedings of the 20th International Conference on Distributed Computing in Smart Systems and the Internet of Things, 2024
DISTRI: Development and Integration of Simulation Tools for Resilient Infrastructure.
Proceedings of the IEEE International Conference on Big Data, 2024
2023
Graph neural networks for detecting anomalies in scientific workflows.
Int. J. High Perform. Comput. Appl., July, 2023
FlyNet: Drones on the Horizon.
IEEE Internet Comput., 2023
VisDict: Improving Communication Via a Visual Dictionary in a Science Gateway.
Comput. Sci. Eng., 2023
Reproducing the Results for Neutron Star Interior Composition Explorer Observation of PSR J0030 + 0451.
Comput. Sci. Eng., 2023
Self-supervised Learning for Anomaly Detection in Computational Workflows.
CoRR, 2023
Flow-Bench: A Dataset for Computational Workflow Anomaly Detection.
CoRR, 2023
Reproducing the results for NICER observation of PSR J0030+0451.
CoRR, 2023
Performance assessment of ensembles of in situ workflows under resource constraints.
Concurr. Comput. Pract. Exp., 2023
ACCESS Pegasus: Bringing Workflows to the ACCESS Masses.
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Proceedings of the Practice and Experience in Advanced Research Computing, 2023
Broadening Student Engagement To Build the Next Generation of Cyberinfrastructure Professionals.
Proceedings of the Practice and Experience in Advanced Research Computing, 2023
End-to-end Integration of Scientific Workflows on Distributed Cyberinfrastructures: Challenges and Lessons Learned with an Earth Science Application.
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Proceedings of the IEEE/ACM 16th International Conference on Utility and Cloud Computing, 2023
Elephants Sharing the Highway: Studying TCP Fairness in Large Transfers over High Throughput Links.
Proceedings of the SC '23 Workshops of The International Conference on High Performance Computing, 2023
Runtime Steering of Molecular Dynamics Simulations Through In Situ Analysis and Annotation of Collective Variables.
Proceedings of the Platform for Advanced Scientific Computing Conference, 2023
Experiments on Network Services for Video Transmission using FABRIC Instrument Resources.
Proceedings of the IEEE INFOCOM 2023, 2023
Network Services Management using Programmable Data Planes for Visual Cloud Computing.
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Proceedings of the International Conference on Computing, Networking and Communications, 2023
Online Boosted Gaussian Learners for In-Situ Detection and Characterization of Protein Folding States in Molecular Dynamics Simulations.
Proceedings of the 19th IEEE International Conference on e-Science, 2023
FlyPaw: Optimized Route Planning for Scientific UAVMissions.
Proceedings of the 19th IEEE International Conference on e-Science, 2023
How is Artificial Intelligence Changing Science?
Proceedings of the 19th IEEE International Conference on e-Science, 2023
2022
Reproducing GW150914: the first observation of gravitational waves from a binary black hole merger.
Dataset, May, 2022
WfCommons: A framework for enabling scientific workflow research and development.
Future Gener. Comput. Syst., 2022
Reproducibility of the First Image of a Black Hole in the Galaxy M87 From the Event Horizon Telescope Collaboration.
Comput. Sci. Eng., 2022
Reproducibility of the First Image of a Black Hole in the Galaxy M87 from the Event Horizon Telescope (EHT) Collaboration.
CoRR, 2022
Fair sharing of network resources among workflow ensembles.
Clust. Comput., 2022
Broadening Student Participation in Cyberinfrastructure Research and Development.
Proceedings of the PEARC '22: Practice and Experience in Advanced Research Computing, Boston, MA, USA, July 10, 2022
Building the Research Innovation Workforce: Challenges and Recommendations from a Virtual Workshop to Advance the Research Computing Community✱.
Proceedings of the PEARC '22: Practice and Experience in Advanced Research Computing, Boston, MA, USA, July 10, 2022
An automated Cryo-EM computational environment on the HPC system using Pegasus WMS.
Proceedings of the IEEE/ACM Workshop on Workflows in Support of Large-Scale Science, 2022
Workflow Anomaly Detection with Graph Neural Networks.
Proceedings of the IEEE/ACM Workshop on Workflows in Support of Large-Scale Science, 2022
Co-scheduling Ensembles of In Situ Workflows.
Proceedings of the IEEE/ACM Workshop on Workflows in Support of Large-Scale Science, 2022
Novel Proposals for FAIR, Automated, Recommendable, and Robust Workflows.
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Proceedings of the IEEE/ACM Workshop on Workflows in Support of Large-Scale Science, 2022
Data Integrity Error Localization in Networked Systems with Missing Data.
Proceedings of the IEEE International Conference on Communications, 2022
Mining Literature-Based Knowledge Graph for Predicting Combination Therapeutics: A COVID-19 Use Case.
Proceedings of the IEEE International Conference on Knowledge Graph, 2022
SIM-SITU: A Framework for the Faithful Simulation of in situ Processing.
Proceedings of the 18th IEEE International Conference on e-Science, 2022
Molecular Dynamics Workflow Decomposition for Hybrid Classic/Quantum Systems.
Proceedings of the 18th IEEE International Conference on e-Science, 2022
Application of Edge-to-Cloud Methods Toward Deep Learning.
Proceedings of the 18th IEEE International Conference on e-Science, 2022
Automating Edge-to-cloud Workflows for Science: Traversing the Edge-to-cloud Continuum with Pegasus.
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Proceedings of the 22nd IEEE International Symposium on Cluster, 2022
Accelerating Scientific Workflows on HPC Platforms with In Situ Processing.
Proceedings of the 22nd IEEE International Symposium on Cluster, 2022
2021
Artificial Intelligence for Modeling Complex Systems: Taming the Complexity of Expert Models to Improve Decision Making.
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ACM Trans. Interact. Intell. Syst., 2021
A lightweight method for evaluating <i>in situ</i> workflow efficiency.
J. Comput. Sci., 2021
The Pegasus workflow management system: Translational computer science in practice.
J. Comput. Sci., 2021
Pushing the Cloud Limits in Support of IceCube Science.
IEEE Internet Comput., 2021
Interhost Orchestration Platform Architecture for Ultrascale Cloud Applications.
IEEE Internet Comput., 2021
Sustainable and Trustworthy Edge Machine Learning.
IEEE Internet Comput., 2021
Guest editor's note: Special issue on application performance optimization in the era of extreme heterogeneity.
Int. J. High Perform. Comput. Appl., 2021
End-to-end online performance data capture and analysis for scientific workflows.
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Future Gener. Comput. Syst., 2021
Reproducing GW150914: The First Observation of Gravitational Waves From a Binary Black Hole Merger.
Comput. Sci. Eng., 2021
SIM-SITU: A Framework for the Faithful Simulation of in-situ Workflows.
CoRR, 2021
Mining Scientific Workflows for Anomalous Data Transfers.
CoRR, 2021
Workflows Community Summit: Bringing the Scientific Workflows Community Together.
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CoRR, 2021
Blueprint: Cyberinfrastructure Center of Excellence.
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CoRR, 2021
Anomaly Detection in Scientific Workflows using End-to-End Execution Gantt Charts and Convolutional Neural Networks.
Proceedings of the PEARC '21: Practice and Experience in Advanced Research Computing, 2021
A Performance Characterization of Scientific Machine Learning Workflows.
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Proceedings of the 2021 IEEE Workshop on Workflows in Support of Large-Scale Science (WORKS), 2021
Emerging Frameworks for Advancing Scientific Workflows Research, Development, and Education.
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Proceedings of the 2021 IEEE Workshop on Workflows in Support of Large-Scale Science (WORKS), 2021
FlyNet: a platform to support scientific workflows from the edge to the core for UAV applications.
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Proceedings of the UCC '21: 2021 IEEE/ACM 14th International Conference on Utility and Cloud Computing, Leicester, United Kingdom, December 6, 2021
Mining Workflows for Anomalous Data Transfers.
Proceedings of the 18th IEEE/ACM International Conference on Mining Software Repositories, 2021
Root Cause Analysis of Data Integrity Errors in Networked Systems with Incomplete Information.
Proceedings of the International Conference on Information and Communication Technology Convergence, 2021
Assessing Resource Provisioning and Allocation of Ensembles of In Situ Workflows.
Proceedings of the ICPP Workshops 2021: 50th International Conference on Parallel Processing, 2021
A Roadmap to Robust Science for High-throughput Applications: The Scientists' Perspective.
Proceedings of the 17th IEEE International Conference on eScience, 2021
Predicting Flash Floods in the Dallas-Fort Worth Metroplex Using Workflows and Cloud Computing.
Proceedings of the 17th IEEE International Conference on eScience, 2021
CrisisFlow: Multimodal Representation Learning Workflow for Crisis Computing.
Proceedings of the 17th IEEE International Conference on eScience, 2021
A Case Study in Scientific Reproducibility from the Event Horizon Telescope (EHT).
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Proceedings of the 17th IEEE International Conference on eScience, 2021
Serverless Containers - Rising Viable Approach to Scientific Workflows.
Proceedings of the 17th IEEE International Conference on eScience, 2021
A Roadmap to Robust Science for High-throughput Applications: The Developers' Perspective.
Proceedings of the IEEE International Conference on Cluster Computing, 2021
2020
The Workflow Trace Archive: Open-Access Data From Public and Private Computing Infrastructures.
IEEE Trans. Parallel Distributed Syst., 2020
Detecting anomalous packets in network transfers: investigations using PCA, autoencoder and isolation forest in TCP.
Mach. Learn., 2020
Characterizing, Modeling, and Accurately Simulating Power and Energy Consumption of I/O-intensive Scientific Workflows.
J. Comput. Sci., 2020
IEEE Internet Comput., 2020
Mobile Cloudization Storytelling: Current Issues From an Optimization Perspective.
IEEE Internet Comput., 2020
Reproducing GW150914: the first observation of gravitational waves from a binary black hole merger.
CoRR, 2020
WorkflowHub: Community Framework for Enabling Scientific Workflow Research and Development - Technical Report.
CoRR, 2020
Workflow Submit Nodes as a Service on Leadership Class Systems.
Proceedings of the PEARC '20: Practice and Experience in Advanced Research Computing, 2020
WorkflowHub: Community Framework for Enabling Scientific Workflow Research and Development.
Proceedings of the IEEE/ACM Workflows in Support of Large-Scale Science, 2020
Application Aware Software Defined Flows of Workflow Ensembles.
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Proceedings of the IEEE/ACM Innovating the Network for Data-Intensive Science, 2020
A Novel Metric to Evaluate In Situ Workflows.
Proceedings of the Computational Science - ICCS 2020, 2020
Identifying Execution Anomalies for Data Intensive Workflows Using Lightweight ML Techniques.
Proceedings of the 2020 IEEE High Performance Extreme Computing Conference, 2020
An On-Demand Weather Avoidance System for Small Aircraft Flight Path Routing.
Proceedings of the Dynamic Data Driven Applications Systems, 2020
Modeling the Performance of Scientific Workflow Executions on HPC Platforms with Burst Buffers.
Proceedings of the IEEE International Conference on Cluster Computing, 2020
2019
FABRIC: A National-Scale Programmable Experimental Network Infrastructure.
IEEE Internet Comput., 2019
Guest editor's note: Special issue on challenges and solutions for porting applications to emerging high performance computing systems.
Int. J. High Perform. Comput. Appl., 2019
The role of machine learning in scientific workflows.
Int. J. High Perform. Comput. Appl., 2019
Using simple PID-inspired controllers for online resilient resource management of distributed scientific workflows.
Future Gener. Comput. Syst., 2019
Measuring the impact of burst buffers on data-intensive scientific workflows.
Future Gener. Comput. Syst., 2019
Collaborative circuit designs using the CRAFT repository.
Future Gener. Comput. Syst., 2019
The Evolution of the Pegasus Workflow Management Software.
Comput. Sci. Eng., 2019
The Workflow Trace Archive: Open-Access Data from Public and Private Computing Infrastructures - Technical Report.
CoRR, 2019
Performance-Feedback Autoscaling with Budget Constraints for Cloud-based Workloads of Workflows.
CoRR, 2019
Integrity Protection for Scientific Workflow Data: Motivation and Initial Experiences.
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Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning), 2019
Training Classifiers to Identify TCP Signatures in Scientific Workflows.
Proceedings of the 2019 IEEE/ACM Innovating the Network for Data-Intensive Science, 2019
A Secure Gateway for Enabling ASIC Design Collaborations.
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Proceedings of the 11th International Workshop on Science Gateways, 2019
An intelligent interface for integrating climate, hydrology, agriculture, and socioeconomic models.
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Proceedings of the 24th International Conference on Intelligent User Interfaces: Companion, 2019
Accurately Simulating Energy Consumption of I/O-Intensive Scientific Workflows.
Proceedings of the Computational Science - ICCS 2019, 2019
Initial Thoughts on Cybersecurity And Reproducibility.
Proceedings of the 2nd International Workshop on Practical Reproducible Evaluation of Computer Systems, 2019
Applicability Study of the PRIMAD Model to LIGO Gravitational Wave Search Workflows.
Proceedings of the 2nd International Workshop on Practical Reproducible Evaluation of Computer Systems, 2019
Custom Execution Environments with Containers in Pegasus-Enabled Scientific Workflows.
Proceedings of the 15th International Conference on eScience, 2019
Characterizing In Situ and In Transit Analytics of Molecular Dynamics Simulations for Next-Generation Supercomputers.
Proceedings of the 15th International Conference on eScience, 2019
Toward a Dynamic Network-Centric Distributed Cloud Platform for Scientific Workflows: A Case Study for Adaptive Weather Sensing.
Proceedings of the 15th International Conference on eScience, 2019
Cyberinfrastructure Center of Excellence Pilot: Connecting Large Facilities Cyberinfrastructure.
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Proceedings of the 15th International Conference on eScience, 2019
Empowering Agroecosystem Modeling with HTC Scientific Workflows: The Cycles Model Use Case.
Proceedings of the 2019 IEEE International Conference on Big Data (IEEE BigData), 2019
Exploration of Workflow Management Systems Emerging Features from Users Perspectives.
Proceedings of the 2019 IEEE International Conference on Big Data (IEEE BigData), 2019
2018
A Job Sizing Strategy for High-Throughput Scientific Workflows.
IEEE Trans. Parallel Distributed Syst., 2018
Int. J. High Perform. Comput. Appl., 2018
The future of scientific workflows.
Int. J. High Perform. Comput. Appl., 2018
Big data and extreme-scale computing.
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Int. J. High Perform. Comput. Appl., 2018
IoT-Hub: New IoT Data-Platform for Virtual Research Environments.
Proceedings of the 10th International Workshop on Science Gateways, 2018
Graphic Encoding of Macromolecules for Efficient High-Throughput Analysis.
Proceedings of the 2018 ACM International Conference on Bioinformatics, 2018
2017
PANORAMA: An approach to performance modeling and diagnosis of extreme-scale workflows.
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Int. J. High Perform. Comput. Appl., 2017
A characterization of workflow management systems for extreme-scale applications.
Future Gener. Comput. Syst., 2017
Reproducibility of execution environments in computational science using Semantics and Clouds.
Future Gener. Comput. Syst., 2017
On the use of burst buffers for accelerating data-intensive scientific workflows.
Proceedings of the 12th Workshop on Workflows in Support of Large-Scale Science, 2017
rvGAHP: push-based job submission using reverse SSH connections.
Proceedings of the 12th Workshop on Workflows in Support of Large-Scale Science, 2017
Accelerating Circuit Realization via a Collaborative Gateway of Innovations.
Proceedings of the 9th International Workshop on Science Gateways, 2017
Distributed workflows for modeling experimental data.
Proceedings of the 2017 IEEE High Performance Extreme Computing Conference, 2017
Toward Prioritization of Data Flows for Scientific Workflows Using Virtual Software Defined Exchanges.
Proceedings of the 13th IEEE International Conference on e-Science, 2017
2016
Dynamic and Fault-Tolerant Clustering for Scientific Workflows.
IEEE Trans. Cloud Comput., 2016
Pegasus in the Cloud: Science Automation through Workflow Technologies.
IEEE Internet Comput., 2016
Storage-aware Algorithms for Scheduling of Workflow Ensembles in Clouds.
J. Grid Comput., 2016
Using Simple PID Controllers to Prevent and Mitigate Faults in Scientific Workflows.
Proceedings of the 11th Workshop on Workflows in Support of Large-Scale Science co-located with The International Conference for High Performance Computing, 2016
Asterism: Pegasus and Dispel4py Hybrid Workflows for Data-Intensive Science.
Proceedings of the Seventh International Workshop on Data-Intensive Computing in the Clouds, 2016
Performance Analysis of an I/O-Intensive Workflow Executing on Google Cloud and Amazon Web Services.
Proceedings of the 2016 IEEE International Parallel and Distributed Processing Symposium Workshops, 2016
Toward an End-to-End Framework for Modeling, Monitoring and Anomaly Detection for Scientific Workflows.
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Proceedings of the 2016 IEEE International Parallel and Distributed Processing Symposium Workshops, 2016
Anomaly detection for scientific workflow applications on networked clouds.
Proceedings of the International Conference on High Performance Computing & Simulation, 2016
Understanding User Behavior: From HPC to HTC.
Proceedings of the International Conference on Computational Science 2016, 2016
Consecutive Job Submission Behavior at Mira Supercomputer.
Proceedings of the 25th ACM International Symposium on High-Performance Parallel and Distributed Computing, 2016
Workflow Performance Profiles: Development and Analysis.
Proceedings of the Euro-Par 2016: Parallel Processing Workshops, 2016
Science automation in practice: Performance data farming in workflows.
Proceedings of the 21st IEEE International Conference on Emerging Technologies and Factory Automation, 2016
Automating environmental computing applications with scientific workflows.
Proceedings of the 12th IEEE International Conference on e-Science, 2016
2015
Scheduling Multilevel Deadline-Constrained Scientific Workflows on Clouds Based on Cost Optimization.
Sci. Program., 2015
Online Task Resource Consumption Prediction for Scientific Workflows.
Parallel Process. Lett., 2015
Reproducibility of neuroimaging analyses across operating systems.
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Frontiers Neuroinformatics, 2015
Algorithms for cost- and deadline-constrained provisioning for scientific workflow ensembles in IaaS clouds.
Future Gener. Comput. Syst., 2015
Pegasus, a workflow management system for science automation.
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Future Gener. Comput. Syst., 2015
Using imbalance metrics to optimize task clustering in scientific workflow executions.
Future Gener. Comput. Syst., 2015
Algorithms and Scheduling Techniques to Manage Resilience and Power Consumption in Distributed Systems (Dagstuhl Seminar 15281).
Dagstuhl Reports, 2015
HUBzero and Pegasus: integrating scientific workflows into science gateways.
Concurr. Comput. Pract. Exp., 2015
Adapting Scientific Workflows on Networked Clouds Using Proactive Introspection.
Proceedings of the 8th IEEE/ACM International Conference on Utility and Cloud Computing, 2015
Characterizing a High Throughput Computing Workload: The Compact Muon Solenoid (CMS) Experiment at LHC.
Proceedings of the International Conference on Computational Science, 2015
Challenges of Running Scientific Workflows in Cloud Environments.
Proceedings of the 6th Workshop on Scientific Cloud Computing, 2015
High Impact Computing: Computing for Science and the Science of Computing.
Proceedings of the 24th International Symposium on High-Performance Parallel and Distributed Computing, 2015
Practical Resource Monitoring for Robust High Throughput Computing.
Proceedings of the 2015 IEEE International Conference on Cluster Computing, 2015
2014
Standing Together for Reproducibility in Large-Scale Computing: Report on reproducibility@XSEDE.
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CoRR, 2014
A cleanup algorithm for implementing storage constraints in scientific workflow executions.
Proceedings of the 9th Workshop on Workflows in Support of Large-Scale Science, 2014
A performance model to estimate execution time of scientific workflows on the cloud.
Proceedings of the 9th Workshop on Workflows in Support of Large-Scale Science, 2014
Leveraging and Adapting ExoGENI Infrastructure for Data-Driven Domain Science Workflows.
Proceedings of the 2014 Third GENI Research and Educational Experiment Workshop, 2014
A Semantic-Based Approach to Attain Reproducibility of Computational Environments in Scientific Workflows: A Case Study.
Proceedings of the Euro-Par 2014: Parallel Processing Workshops, 2014
Community Resources for Enabling Research in Distributed Scientific Workflows.
Proceedings of the 10th IEEE International Conference on e-Science, 2014
2013
Hosted Science: Managing Computational Workflows in the Cloud.
Parallel Process. Lett., 2013
A Case Study into Using Common Real-Time Workflow Monitoring Infrastructure for Scientific Workflows.
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J. Grid Comput., 2013
Characterizing and profiling scientific workflows.
Future Gener. Comput. Syst., 2013
Comparing FutureGrid, Amazon EC2, and Open Science Grid for Scientific Workflows.
Comput. Sci. Eng., 2013
Creating A Galactic Plane Atlas With Amazon Web Services.
CoRR, 2013
Toward fine-grained online task characteristics estimation in scientific workflows.
Proceedings of WORKS 2013: 8th Workshop On Workflows in Support of Large-Scale Science, 2013
Evaluating I/O aware network management for scientific workflows on networked clouds.
Proceedings of the Third International Workshop on Network-Aware Data Management, 2013
Cost Optimization of Execution of Multi-level Deadline-Constrained Scientific Workflows on Clouds.
Proceedings of the Parallel Processing and Applied Mathematics, 2013
Bringing Scientific Workflow to the Masses via Pegasus and HUBzero.
Proceedings of the 5th International Workshop on Science Gateways, 2013
Imbalance optimization in scientific workflows.
Proceedings of the International Conference on Supercomputing, 2013
Balanced Task Clustering in Scientific Workflows.
Proceedings of the 9th IEEE International Conference on eScience, 2013
Introducing PRECIP: An API for Managing Repeatable Experiments in the Cloud.
Proceedings of the IEEE 5th International Conference on Cloud Computing Technology and Science, 2013
Energy-Constrained Provisioning for Scientific Workflow Ensembles.
Proceedings of the 2013 International Conference on Cloud and Green Computing, Karlsruhe, Germany, September 30, 2013
Rethinking data management for big data scientific workflows.
Proceedings of the 2013 IEEE International Conference on Big Data (IEEE BigData 2013), 2013
2012
An Evaluation of the Cost and Performance of Scientific Workflows on Amazon EC2.
J. Grid Comput., 2012
A Tale Of 160 Scientists, Three Applications, A Workshop and A Cloud
CoRR, 2012
Enabling large-scale scientific workflows on petascale resources using MPI master/worker.
Proceedings of the 1st Conference of the Extreme Science and Engineering Discovery Environment, 2012
Fault Tolerant Clustering in Scientific Workflows.
Proceedings of the Eighth IEEE World Congress on Services, 2012
A General Approach to Real-Time Workflow Monitoring.
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Proceedings of the 2012 SC Companion: High Performance Computing, 2012
Cost- and deadline-constrained provisioning for scientific workflow ensembles in IaaS clouds.
Proceedings of the SC Conference on High Performance Computing Networking, 2012
Integrating Policy with Scientific Workflow Management for Data-Intensive Applications.
Proceedings of the 2012 SC Companion: High Performance Computing, 2012
Peer-to-Peer Data Sharing for Scientific Workflows on Amazon EC2.
Proceedings of the 2012 SC Companion: High Performance Computing, 2012
WorkflowSim: A toolkit for simulating scientific workflows in distributed environments.
Proceedings of the 8th IEEE International Conference on E-Science, 2012
Failure analysis of distributed scientific workflows executing in the cloud.
Proceedings of the 8th International Conference on Network and Service Management, 2012
Using Clouds for Science, is it just Kicking the Can down the Road?.
Proceedings of the CLOSER 2012 - Proceedings of the 2nd International Conference on Cloud Computing and Services Science, Porto, Portugal, 18, 2012
Integration of Workflow Partitioning and Resource Provisioning.
Proceedings of the 12th IEEE/ACM International Symposium on Cluster, 2012
2011
New tools and methods for direct programmatic access to the dbSNP relational database.
Nucleic Acids Res., 2011
BTS: Resource capacity estimate for time-targeted science workflows.
J. Parallel Distributed Comput., 2011
Metrics for heterogeneous scientific workflows: A case study of an earthquake science application.
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Int. J. High Perform. Comput. Appl., 2011
Wings: Intelligent Workflow-Based Design of Computational Experiments.
IEEE Intell. Syst., 2011
The interplay of resource provisioning and workflow optimization in scientific applications.
Concurr. Comput. Pract. Exp., 2011
RseqFlow: workflows for RNA-Seq data analysis.
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Bioinform., 2011
Failure prediction and localization in large scientific workflows.
Proceedings of the WORKS'11, 2011
Workflow overhead analysis and optimizations.
Proceedings of the WORKS'11, 2011
Partitioning and Scheduling Workflows across Multiple Sites with Storage Constraints.
Proceedings of the Parallel Processing and Applied Mathematics, 2011
Wrangler: virtual cluster provisioning for the cloud.
Proceedings of the 20th ACM International Symposium on High Performance Distributed Computing, 2011
Online Fault and Anomaly Detection for Large-Scale Scientific Workflows.
Proceedings of the 13th IEEE International Conference on High Performance Computing & Communication, 2011
Enabling Data and Compute Intensive Workflows in Bioinformatics.
Proceedings of the Euro-Par 2011: Parallel Processing Workshops - CCPI, CGWS, HeteroPar, HiBB, HPCVirt, HPPC, HPSS, MDGS, ProPer, Resilience, UCHPC, VHPC, Bordeaux, France, August 29, 2011
Experiences Using GlideinWMS and the Corral Frontend across Cyberinfrastructures.
Proceedings of the IEEE 7th International Conference on E-Science, 2011
A Cloud-based Dynamic Workflow for Mass Spectrometry Data Analysis.
Proceedings of the IEEE 7th International Conference on E-Science, 2011
Online workflow management and performance analysis with Stampede.
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Proceedings of the 7th International Conference on Network and Service Management, 2011
Automating Application Deployment in Infrastructure Clouds.
Proceedings of the IEEE 3rd International Conference on Cloud Computing Technology and Science, 2011
2010
Experiences with resource provisioning for scientific workflows using Corral.
Sci. Program., 2010
Grid and Cloud Computing and their Application.
Scalable Comput. Pract. Exp., 2010
SPOT: a web-based tool for using biological databases to prioritize SNPs after a genome-wide association study.
Nucleic Acids Res., 2010
Scaling up workflow-based applications.
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J. Comput. Syst. Sci., 2010
Grids and Clouds: Making Workflow Applications Work in Heterogeneous Distributed Environments.
Int. J. High Perform. Comput. Appl., 2010
Scientific workflows and clouds.
ACM Crossroads, 2010
The Application of Cloud Computing to Astronomy: A Study of Cost and Performance
CoRR, 2010
The Application of Cloud Computing to the Creation of Image Mosaics and Management of Their Provenance
CoRR, 2010
The Role of Provenance Management in Accelerating the Rate of Astronomical Research
CoRR, 2010
Scientific Workflow Applications on Amazon EC2
CoRR, 2010
Metadata and provenance management
CoRR, 2010
Parameterized specification, configuration and execution of data-intensive scientific workflows.
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Clust. Comput., 2010
Data Sharing Options for Scientific Workflows on Amazon EC2.
Proceedings of the Conference on High Performance Computing Networking, 2010
BPEL4Pegasus: Combining Business and Scientific Workflows.
Proceedings of the Service-Oriented Computing - 8th International Conference, 2010
Bridging the Gap between Business and Scientific Workflows: Humans in the Loop of Scientific Workflows.
Proceedings of the Sixth International Conference on e-Science, 2010
2009
An End-to-End Framework for Provisioning-Based Resource and Application Management.
IEEE Syst. J., 2009
HPC and Grid Computing for Integrative Biomedical Research.
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Int. J. High Perform. Comput. Appl., 2009
Montage: a grid portal and software toolkit for science-grade astronomical image mosaicking.
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Int. J. Comput. Sci. Eng., 2009
Workflows and e-Science: An overview of workflow system features and capabilities.
Future Gener. Comput. Syst., 2009
Adaptive workflow processing and execution in Pegasus.
Concurr. Comput. Pract. Exp., 2009
Pipeline-centric provenance model.
Proceedings of the 4th Workshop on Workflows in Support of Large-Scale Science, 2009
Implementing Software Acceptance Tests as Scientific Workflows.
Proceedings of the International Conference on Parallel and Distributed Processing Techniques and Applications, 2009
An integrated framework for performance-based optimization of scientific workflows.
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Proceedings of the 18th ACM International Symposium on High Performance Distributed Computing, 2009
Mapping Workflows on Grid Resources: Experiments with the Montage Workflow.
Proceedings of the Grids, 2009
Scientific Process Automation and Workflow Management.
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Proceedings of the Scientific Data Management - Challenges, Technology, and Deployment., 2009
Metadata and Provenance Management.
Proceedings of the Scientific Data Management - Challenges, Technology, and Deployment., 2009
2008
Provenance: The Bridge Between Experiments and Data.
Comput. Sci. Eng., 2008
Special Issue: The First Provenance Challenge.
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Concurr. Comput. Pract. Exp., 2008
Provenance trails in the Wings/Pegasus system.
Concurr. Comput. Pract. Exp., 2008
The cost of doing science on the cloud: the Montage example.
Proceedings of the ACM/IEEE Conference on High Performance Computing, 2008
Workflow task clustering for best effort systems with Pegasus.
Proceedings of the 15th ACM Mardi Gras conference: From lightweight mash-ups to lambda grids: Understanding the spectrum of distributed computing requirements, applications, tools, infrastructures, interoperability, and the incremental adoption of key capabilities, Baton Rouge, Louisiana, USA, January 29, 2008
Designing and parameterizing a workflow for optimization: A case study in biomedical imaging.
Proceedings of the 22nd IEEE International Symposium on Parallel and Distributed Processing, 2008
Clouds: An Opportunity for Scientific Applications?.
Proceedings of the High Speed and Large Scale Scientific Computing - Selected Papers from the High Performance Computing Workshop, Cetraro, Italy, June 30, 2008
Resource Provisioning Options for Large-Scale Scientific Workflows.
Proceedings of the Fourth International Conference on e-Science, 2008
On the Use of Cloud Computing for Scientific Workflows.
Proceedings of the Fourth International Conference on e-Science, 2008
Reducing Time-to-Solution Using Distributed High-Throughput Mega-Workflows - Experiences from SCEC CyberShake.
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Proceedings of the Fourth International Conference on e-Science, 2008
Estimating Resource Needs for Time-Constrained Workflows.
Proceedings of the Fourth International Conference on e-Science, 2008
Data Management Challenges of Data-Intensive Scientific Workflows.
Proceedings of the 8th IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2008), 2008
2007
Dynamic computational workflows: Discovery, optimisation and scheduling.
Sci. Program., 2007
Optimizing workflow data footprint.
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Sci. Program., 2007
Examining the Challenges of Scientific Workflows.
Computer, 2007
Intelligent Optimization of Parallel and Distributed Applications.
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Proceedings of the 21th International Parallel and Distributed Processing Symposium (IPDPS 2007), 2007
A provisioning model and its comparison with best-effort for performance-cost optimization in grids.
Proceedings of the 16th International Symposium on High-Performance Distributed Computing (HPDC-16 2007), 2007
Integrating existing scientific workflow systems: the Kepler/Pegasus example.
Proceedings of the 2nd workshop on Workflows in support of large-scale science, 2007
On the black art of designing computational workflows.
Proceedings of the 2nd workshop on Workflows in support of large-scale science, 2007
Adaptive pricing for resource reservations in Shared environments.
Proceedings of the 8th IEEE/ACM International Conference on Grid Computing (GRID 2007), 2007
Data placement for scientific applications in distributed environments.
Proceedings of the 8th IEEE/ACM International Conference on Grid Computing (GRID 2007), 2007
Connecting Scientific Data to Scientific Experiments with Provenance.
Proceedings of the Third International Conference on e-Science and Grid Computing, 2007
Scheduling Data-IntensiveWorkflows onto Storage-Constrained Distributed Resources.
Proceedings of the Seventh IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2007), 2007
Wings for Pegasus: Creating Large-Scale Scientific Applications Using Semantic Representations of Computational Workflows.
Proceedings of the Twenty-Second AAAI Conference on Artificial Intelligence, 2007
SCEC CyberShake Workflows - Automating Probabilistic Seismic Hazard Analysis Calculations.
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Proceedings of the Workflows for e-Science, Scientific Workflows for Grids., 2007
Proceedings of the Workflows for e-Science, Scientific Workflows for Grids., 2007
Pegasus: Mapping Large-Scale Workflows to Distributed Resources.
Proceedings of the Workflows for e-Science, Scientific Workflows for Grids., 2007
Looking into the Future of Workflows: The Challenges Ahead.
Proceedings of the Workflows for e-Science, Scientific Workflows for Grids., 2007
Generating Complex Astronomy Workflows.
Proceedings of the Workflows for e-Science, Scientific Workflows for Grids., 2007
2006
What makes workflows work in an opportunistic environment?
Concurr. Comput. Pract. Exp., 2006
Wings for Pegasus: A Semantic Approach to Creating Very Large Scientific Workflows.
Proceedings of the OWLED*06 Workshop on OWL: Experiences and Directions, 2006
Metadata Catalogs with Semantic Representations.
Proceedings of the Provenance and Annotation of Data, 2006
Pegasus and DAGMan From Concept to Execution: Mapping Scientific Workflows onto Today's Cyberinfrastructure.
Proceedings of the High Performance Computing and Grids in Action, 2006
Application-Level Resource Provisioning on the Grid.
Proceedings of the Second International Conference on e-Science and Grid Technologies (e-Science 2006), 2006
Automating Climate Science: Large Ensemble Simulations on the TeraGrid with the GriPhyN Virtual Data System.
Proceedings of the Second International Conference on e-Science and Grid Technologies (e-Science 2006), 2006
Managing Large-Scale Scientific Workflows in Distributed Environments: Experiences and Challenges.
Proceedings of the Second International Conference on e-Science and Grid Technologies (e-Science 2006), 2006
Managing Large-Scale Workflow Execution from Resource Provisioning to Provenance Tracking: The CyberShake Example.
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Proceedings of the Second International Conference on e-Science and Grid Technologies (e-Science 2006), 2006
Enabling parallel scientific applications with workflow tools.
Proceedings of the 2006 IEEE Challenges of Large Applications in Distributed Environments, 2006
2005
Pegasus: A framework for mapping complex scientific workflows onto distributed systems.
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Sci. Program., 2005
Simplifying construction of complex workflows for non-expert users of the Southern California Earthquake Center Community Modeling Environment.
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SIGMOD Rec., 2005
Optimizing Grid-Based Workflow Execution.
J. Grid Comput., 2005
The Pegasus portal: web based grid computing.
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Proceedings of the 2005 ACM Symposium on Applied Computing (SAC), 2005
A Comparison of Two Methods for Building Astronomical Image Mosaics on a Grid.
Proceedings of the 34th International Conference on Parallel Processing Workshops (ICPP 2005 Workshops), 2005
Task scheduling strategies for workflow-based applications in grids.
Proceedings of the 5th International Symposium on Cluster Computing and the Grid (CCGrid 2005), 2005
Performance Prediction-based versus Load-based Site Selection: Quantifying the Difference.
Proceedings of the ISCA 18th International Conference on Parallel and Distributed Computing Systems, 2005
2004
Artificial Intelligence and Grids: Workflow Planning and Beyond.
IEEE Intell. Syst., 2004
Automatically Composed Workflows for Grid Environments.
IEEE Intell. Syst., 2004
Grid-Based Metadata Services.
Proceedings of the 16th International Conference on Scientific and Statistical Database Management (SSDBM 2004), 2004
The Grid2003 Production Grid: Principles and Practice.
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Proceedings of the 13th International Symposium on High-Performance Distributed Computing (HPDC-13 2004), 2004
Pegasus: Mapping Scientific Workflows onto the Grid.
Proceedings of the Grid Computing, 2004
From Event-Driven Workflows Towards a Posteriori Computing.
Proceedings of the Future Generation Grids: Proceedings of the Workshop on Future Generation Grids, 2004
Artemis: Integrating Scientific Data on the Grid.
Proceedings of the Nineteenth National Conference on Artificial Intelligence, 2004
2003
High-performance remote access to climate simulation data: a challenge problem for data grid technologies.
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Parallel Comput., 2003
Mapping Abstract Complex Workflows onto Grid Environments.
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J. Grid Comput., 2003
Multi-wavelength image space: another Grid-enabled science.
Concurr. Comput. Pract. Exp., 2003
A Metadata Catalog Service for Data Intensive Applications.
Proceedings of the ACM/IEEE SC2003 Conference on High Performance Networking and Computing, 2003
Grid-Based Galaxy Morphology Analysis for the National Virtual Observatory.
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Proceedings of the ACM/IEEE SC2003 Conference on High Performance Networking and Computing, 2003
Pegasus and the Pulsar Search: From Metadata to Execution on the Grid.
Proceedings of the Parallel Processing and Applied Mathematics, 2003
Simulation of Dynamic Data Replication Strategies in Data Grids.
Proceedings of the 17th International Parallel and Distributed Processing Symposium (IPDPS 2003), 2003
Transparent Grid Computing: A Knowledge-Based Approach.
Proceedings of the Fifteenth Conference on Innovative Applications of Artificial Intelligence, 2003
The Role of Planning in Grid Computing.
Proceedings of the Thirteenth International Conference on Automated Planning and Scheduling (ICAPS 2003), 2003
2002
Simulating Spatially Explicit Problems on High Performance Architectures.
J. Parallel Distributed Comput., 2002
Compiler-Optimized Simulation of Large-Scale Applications on High Performance Architectures.
J. Parallel Distributed Comput., 2002
Giggle: a framework for constructing scalable replica location services.
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Proceedings of the 2002 ACM/IEEE conference on Supercomputing, 2002
GriPhyN and LIGO, Building a Virtual Data Grid for Gravitational Wave Scientists.
Proceedings of the 11th IEEE International Symposium on High Performance Distributed Computing (HPDC-11 2002), 2002
2001
Parallel Simulation of Large-Scale Parallel Applications.
Int. J. High Perform. Comput. Appl., 2001
High-performance remote access to climate simulation data: a challenge problem for data grid technologies.
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Proceedings of the 2001 ACM/IEEE conference on Supercomputing, 2001
Applications of Virtual Data in the LIGO Experiment.
Proceedings of the Parallel Processing and Applied Mathematics, 2001
Improving lookahead in parallel discrete event simulations of large-scale applications using compiler analysis.
Proceedings of the 15th Workshop on Parallel and Distributed Simulation, 2001
A Virtual Data Grid for LIGO.
Proceedings of the High-Performance Computing and Networking, 9th International Conference, 2001
2000
Asynchronous Parallel Simulation of Parallel Programs.
IEEE Trans. Software Eng., 2000
POEMS: End-to-End Performance Design of Large Parallel Adaptive Computational Systems.
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IEEE Trans. Software Eng., 2000
1999
Compiler-Supported Simulation of Highly Scalable Parallel Applications.
Proceedings of the ACM/IEEE Conference on Supercomputing, 1999
Performance Prediction of Large Parallel Applications using Parallel Simulations.
Proceedings of the 1999 ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming (PPOPP'99), 1999
1998
Poems: end-to-end performance design of large parallel adaptive computational systems.
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Proceedings of the First International Workshop on Software and Performance, 1998
Dynamic Load Balancing in Parallel Discrete Event Simulation for Spatially Explicit Problems.
Proceedings of the 12th Workshop on Parallel and Distributed Simulation, 1998
1997
Continuously Monitored Global Virtual Time.
Proceedings of the International Conference on Parallel and Distributed Processing Techniques and Applications, 1997
Breadth-First Rollback in Spatially Explicit Simulations.
Proceedings of the Eleventh Workshop on Parallel and Distributed Simulation, 1997
1996
Simulating Lyme disease using parallel discrete event simulation.
Proceedings of the 28th conference on Winter simulation, 1996
1995
Integrating Data and Task Parallelism in Scientific Programs.
Proceedings of the Languages, 1995