Modeling non-linear effects with neural networks in Relational Event Models.
Soc. Networks, 2024
Stochastic actor oriented model with random effects.
Soc. Networks, 2024
Latent event history models for quasi-reaction systems.
Comput. Stat. Data Anal., 2024
Analyzing non-linear network effects in the European interbank market.
Proceedings of the 11th IEEE Swiss Conference on Data Science, 2024
A mixed-effects stochastic model reveals clonal dominance in gene therapy safety studies.
BMC Bioinform., December, 2023
Scalable inference of cell differentiation networks in gene therapy clonal tracking studies of haematopoiesis.
Bioinform., October, 2023
netgwas: An R Package for Network-Based Genome Wide Association Studies.
R J., February, 2023
cglasso: An <i>R</i> Package for Conditional Graphical Lasso Inference with Censored and Missing Values.
J. Stat. Softw., 2023
Fast inference of latent space dynamics in huge relational event networks.
CoRR, 2023
Estimating Parameters of 3D Cell Model Using a Bayesian Recursive Global Optimizer (BaRGO).
Proceedings of the Computational Science - ICCS 2023, 2023
Non-parametric estimation of reciprocity and triadic effects in relational event networks.
Soc. Networks, 2022
A Software Tool For Sparse Estimation Of A General Class Of High-dimensional GLMs.
R J., 2022
Bistability in fatty-acid oxidation resulting from substrate inhibition.
PLoS Comput. Biol., 2021
Test for triadic closure and triadic protection in temporal relational event data.
Soc. Netw. Anal. Min., 2020
mudfold: An R Package for Nonparametric IRT Modelling of Unfolding Processes.
R J., 2020
Selecting the tuning parameter in penalized Gaussian graphical models.
Stat. Comput., 2019
De novo construction of polyploid linkage maps using discrete graphical models.
Bioinform., 2019
Penalized inference of the hematopoietic cell differentiation network via high-dimensional clonal tracking.
Appl. Netw. Sci., 2019
Extended differential geometric LARS for high-dimensional GLMs with general dispersion parameter.
Stat. Comput., 2018
A penalized inference approach to stochastic blockmodelling of community structure in the Italian Parliament.
CoRR, 2016
Consistency of biological networks inferred from microarray and sequencing data.
BMC Bioinform., 2016
NEAT: an efficient network enrichment analysis test.
BMC Bioinform., 2016
Time-course window estimator for ordinary differential equations linear in the parameters.
Stat. Comput., 2015
Factorial graphical models for dynamic networks.
Netw. Sci., 2015
Inferring slowly-changing dynamic gene-regulatory networks.
BMC Bioinform., 2015
Reproducing kernel Hilbert space based estimation of systems of ordinary differential equations.
Pattern Recognit. Lett., 2014
Using mixture of Gamma distributions for Bayesian analysis in an M/G/1 queue with optional second service.
Comput. Stat., 2013
High dimensional Sparse Gaussian Graphical Mixture Model.
CoRR, 2013
Accounting for immunoprecipitation efficiencies in the statistical analysis of ChIP-seq data.
BMC Bioinform., 2013
Dynamic Gaussian Graphical Models for Modelling Genomic Networks.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2013
Borrowing strength: a likelihood ratio test for related sparse signals.
Bioinform., 2012
Probabilistic relabelling strategies for the label switching problem in Bayesian mixture models.
Stat. Comput., 2010
Test the Overall Significance of p-values by Using Joint Tail Probability of Ordered p-values as Test Statistic.
Proceedings of the Advanced Data Mining and Applications, 4th International Conference, 2008
Identifying Variables Responsible for Clustering in Discriminant Analysis of Data from Infrared Microspectroscopy of a Biological Sample.
J. Comput. Biol., 2007
Bayesian inference of the kinetic parameters of a realistic MAPK/ERK pathway.
BMC Syst. Biol., 2007
A global statistical test for improved detection of gene activity.
BMC Syst. Biol., 2007
Exact and Approximate Stochastic Simulations of the MAPK Pathway and Comparisons of Simulations Results.
J. Integr. Bioinform., 2006
How Scale-Free Are Biological Networks.
J. Comput. Biol., 2006
Computational inference of regulator activity in a single input motif from gene expression data.
BMC Bioinform., 2005
An experimental evaluation of a loop versus a reference design for two-channel microarrays.
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Bioinform., 2005
Weighted analysis of microarray gene expression using maximum-likelihood.
Bioinform., 2005
Statistical Adjustment of Signal Censoring in Gene Expression Experiments.
Bioinform., 2003