Review of deep learning-based pathological image classification: From task-specific models to foundation models.
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Future Gener. Comput. Syst., 2025
A comprehensive performance evaluation, comparison, and integration of computational methods for detecting and estimating cross-contamination of human samples in cancer next-generation sequencing analysis.
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J. Biomed. Informatics, 2024
Peridynamic modeling for multiscale heat transport of phonon Boltzmann transport equation.
Comput. Phys. Commun., 2024
Transformer-Based Multi-Scale Fusion for Robust Predicting Microsatellite Instability from Pathological Images.
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Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024
OncoCTMiner: streamlining precision oncology trial matching via molecular profile analysis.
Database J. Biol. Databases Curation, 2023
Multi-class Cancer Classification of Whole Slide Images Through Transformer and Multiple Instance Learning.
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Proceedings of the Bioinformatics Research and Applications - 19th International Symposium, 2023
ACMViz: a visual analytics approach to understand DRL-based autonomous control model.
J. Vis., 2022
OncoPubMiner: a platform for mining oncology publications.
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Briefings Bioinform., 2022
RabbitQCPlus: More Efficient Quality Control for Sequencing Data.
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Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022
Visual analysis of meteorological satellite data via model-agnostic meta-learning.
J. Vis., 2021
RabbitQC: high-speed scalable quality control for sequencing data.
Bioinform., 2021
Comprehensive review and evaluation of computational methods for identifying FLT3-internal tandem duplication in acute myeloid leukaemia.
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Briefings Bioinform., 2021
Comprehensive fundamental somatic variant calling and quality management strategies for human cancer genomes.
Briefings Bioinform., 2021
MSIsensor-ct: microsatellite instability detection using cfDNA sequencing data.
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Briefings Bioinform., 2021
HotSpot3D web server: an integrated resource for mutation analysis in protein 3D structures.
Bioinform., 2020
Digital Currency Investment Strategy Framework Based on Ranking.
Proceedings of the Algorithms and Architectures for Parallel Processing, 2020
Change-Encryption: Encryption Using Spatiotemporal Information as a Function Model.
Proceedings of the 7th IEEE International Conference on Cyber Security and Cloud Computing, 2020
Gclust: A Parallel Clustering Tool for Microbial Genomic Data.
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Genom. Proteom. Bioinform., 2019
How Big Data and High-performance Computing Drive Brain Science.
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Genom. Proteom. Bioinform., 2019
Distributed Parameter Optimization Scheduling Strategy and System Design Based on Mesos.
Proceedings of the 5th IEEE International Conference on Big Data Security on Cloud, 2019
DGCF: A Distributed Greedy Clustering Framework for Large-scale Genomic Sequences.
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019
MSIsensor: microsatellite instability detection using paired tumor-normal sequence data.
Bioinform., 2014
MGAviewer: a desktop visualization tool for analysis of metagenomics alignment data.
Bioinform., 2013
CD-HIT: accelerated for clustering the next-generation sequencing data.
Bioinform., 2012
Ultrafast clustering algorithms for metagenomic sequence analysis.
Briefings Bioinform., 2012
FR-HIT, a very fast program to recruit metagenomic reads to homologous reference genomes.
Bioinform., 2011
Artificial and natural duplicates in pyrosequencing reads of metagenomic data.
BMC Bioinform., 2010
CD-HIT Suite: a web server for clustering and comparing biological sequences.
Bioinform., 2010
ScBioGrid: a commodity supercomputing environment supporting bioinformatics research.
Int. J. Comput. Math., 2007